RNA–Protein interactions for RNA: ENST00000551355.5

NEK3-203, Transcript of NIMA related kinase 3, humanhuman

TSL 5

Gene NEK3, Length 727 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK3-203ENST00000551355 GLI2P10070 1586 aa15.72■□□□□ 0.11
NEK3-203ENST00000551355 TTC37Q6PGP7 1564 aa15.72■□□□□ 0.11
NEK3-203ENST00000551355 RSPH4AQ5TD94 716 aa15.72■□□□□ 0.11
NEK3-203ENST00000551355 PTPN23Q9H3S7 1636 aa15.72■□□□□ 0.11
NEK3-203ENST00000551355 PLEKHH2Q8IVE3 1493 aa15.71■□□□□ 0.11
NEK3-203ENST00000551355 CD109Q6YHK3 1445 aa15.71■□□□□ 0.11
NEK3-203ENST00000551355 ARHGAP5Q13017 1502 aa15.7■□□□□ 0.1
NEK3-203ENST00000551355 PREX2Q70Z35 1606 aa15.7■□□□□ 0.1
NEK3-203ENST00000551355 FAM69CQ0P6D2 419 aa15.69■□□□□ 0.1
NEK3-203ENST00000551355 ZNF777Q9ULD5 760 aaPredicted RBP15.69■□□□□ 0.1
NEK3-203ENST00000551355 KIAA1107Q9UPP5 1409 aa15.68■□□□□ 0.1
NEK3-203ENST00000551355 MYO5CQ9NQX4 1742 aa15.68■□□□□ 0.1
NEK3-203ENST00000551355 CDC42BPAQ5VT25 1732 aa15.68■□□□□ 0.1
NEK3-203ENST00000551355 CAMSAP2Q08AD1 1489 aa15.67■□□□□ 0.1
NEK3-203ENST00000551355 ZNF644Q9H582 1327 aaPredicted RBP15.66■□□□□ 0.1
NEK3-203ENST00000551355 FANCAO15360 1455 aa15.65■□□□□ 0.1
NEK3-203ENST00000551355 DIP2BQ9P265 1576 aa15.65■□□□□ 0.1
NEK3-203ENST00000551355 CDC42BPBQ9Y5S2 1711 aa15.63■□□□□ 0.09
NEK3-203ENST00000551355 NEO1Q92859 1461 aa15.63■□□□□ 0.09
NEK3-203ENST00000551355 DAPK1P53355 1430 aa15.62■□□□□ 0.09
NEK3-203ENST00000551355 TSPY4P0CV99 314 aa15.62■□□□□ 0.09
NEK3-203ENST00000551355 TSPY10P0CW01 314 aa15.62■□□□□ 0.09
NEK3-203ENST00000551355 ITGAEP38570 1179 aa15.62■□□□□ 0.09
NEK3-203ENST00000551355 CFAP74Q9C0B2 1584 aa15.62■□□□□ 0.09
NEK3-203ENST00000551355 MAP3K4Q9Y6R4 1608 aa15.61■□□□□ 0.09
NEK3-203ENST00000551355 TEX14Q8IWB6 1497 aa15.61■□□□□ 0.09
NEK3-203ENST00000551355 ARHGEF5Q12774 1597 aa15.61■□□□□ 0.09
NEK3-203ENST00000551355 SAMD9LQ8IVG5 1584 aa15.61■□□□□ 0.09
NEK3-203ENST00000551355 ABCC5O15440 1437 aa15.6■□□□□ 0.09
NEK3-203ENST00000551355 AKNAQ7Z591 1439 aa15.6■□□□□ 0.09
NEK3-203ENST00000551355 MBD5Q9P267 1494 aa15.6■□□□□ 0.09
NEK3-203ENST00000551355 ROCK1Q13464 1354 aa15.6■□□□□ 0.09
NEK3-203ENST00000551355 DNMT1P26358 1616 aaKnown RBP15.59■□□□□ 0.09
NEK3-203ENST00000551355 HNRNPMP52272 730 aaKnown RBP eCLIP15.59■□□□□ 0.09
NEK3-203ENST00000551355 CCDC141Q6ZP82 1450 aa15.59■□□□□ 0.09
NEK3-203ENST00000551355 SHANK2Q9UPX8 1470 aa15.59■□□□□ 0.09
NEK3-203ENST00000551355 ACIN1Q9UKV3 1341 aaKnown RBP15.58■□□□□ 0.08
NEK3-203ENST00000551355 ADGRL1O94910 1474 aa15.58■□□□□ 0.08
NEK3-203ENST00000551355 ABCC1P33527 1531 aa15.58■□□□□ 0.08
NEK3-203ENST00000551355 SCAPERQ9BY12 1400 aa15.56■□□□□ 0.08
NEK3-203ENST00000551355 SYCP2Q9BX26 1530 aa15.56■□□□□ 0.08
NEK3-203ENST00000551355 PTPRKQ15262 1439 aa15.55■□□□□ 0.08
NEK3-203ENST00000551355 ANKRD30AQ9BXX3 1397 aa15.55■□□□□ 0.08
NEK3-203ENST00000551355 HRCP23327 699 aa15.55■□□□□ 0.08
NEK3-203ENST00000551355 HFM1A2PYH4 1435 aa15.54■□□□□ 0.08
NEK3-203ENST00000551355 ADGRL2O95490 1459 aa15.53■□□□□ 0.08
NEK3-203ENST00000551355 C9orf84Q5VXU9 1444 aa15.53■□□□□ 0.08
NEK3-203ENST00000551355 ARHGEF12Q9NZN5 1544 aa15.53■□□□□ 0.08
NEK3-203ENST00000551355 ZNF518AQ6AHZ1 1483 aa15.52■□□□□ 0.08
NEK3-203ENST00000551355 RTEL1-TNFRSF6BF6WH68 1400 aa15.52■□□□□ 0.08
NEK3-203ENST00000551355 SETD5Q9C0A6 1442 aa15.52■□□□□ 0.08
NEK3-203ENST00000551355 TRHP20396 242 aaPredicted RBP15.52■□□□□ 0.08
NEK3-203ENST00000551355 CHIC2Q9UKJ5 165 aa15.52■□□□□ 0.08
NEK3-203ENST00000551355 NCOA1Q15788 1441 aa15.51■□□□□ 0.07
NEK3-203ENST00000551355 SPAG9O60271 1321 aaKnown RBP15.51■□□□□ 0.07
NEK3-203ENST00000551355 DENND4BO75064 1496 aaPredicted RBP15.51■□□□□ 0.07
NEK3-203ENST00000551355 TRAPPC8Q9Y2L5 1435 aa15.51■□□□□ 0.07
NEK3-203ENST00000551355 MAST1Q9Y2H9 1570 aa15.5■□□□□ 0.07
NEK3-203ENST00000551355 POGZQ7Z3K3 1410 aa15.5■□□□□ 0.07
NEK3-203ENST00000551355 AFAP1Q8N556 730 aa15.49■□□□□ 0.07
NEK3-203ENST00000551355 KIF13AQ9H1H9 1805 aa15.49■□□□□ 0.07
NEK3-203ENST00000551355 NAIPQ13075 1403 aa15.49■□□□□ 0.07
NEK3-203ENST00000551355 CROCC2H7BZ55 1655 aa15.48■□□□□ 0.07
NEK3-203ENST00000551355 RRP7BPQ9NSQ0 103 aa15.48■□□□□ 0.07
NEK3-203ENST00000551355 RAB3GAP2Q9H2M9 1393 aa15.46■□□□□ 0.07
NEK3-203ENST00000551355 KIF15Q9NS87 1388 aa15.45■□□□□ 0.06
NEK3-203ENST00000551355 MLH3Q9UHC1 1453 aa15.45■□□□□ 0.06
NEK3-203ENST00000551355 PPRC1Q5VV67 1664 aaKnown RBP15.44■□□□□ 0.06
NEK3-203ENST00000551355 ADGBQ8N7X0 1667 aa15.44■□□□□ 0.06
NEK3-203ENST00000551355 KDM5CP41229 1560 aa15.44■□□□□ 0.06
NEK3-203ENST00000551355 MYT1LQ9UL68 1186 aa15.43■□□□□ 0.06
NEK3-203ENST00000551355 PLXNC1O60486 1568 aa15.43■□□□□ 0.06
NEK3-203ENST00000551355 ANKRD50Q9ULJ7 1429 aa15.43■□□□□ 0.06
NEK3-203ENST00000551355 MAGI2Q86UL8 1455 aa15.42■□□□□ 0.06
NEK3-203ENST00000551355 RAPGEF3O95398 923 aa15.42■□□□□ 0.06
NEK3-203ENST00000551355 ATP7AQ04656 1500 aa15.41■□□□□ 0.06
NEK3-203ENST00000551355 ZFYVE16Q7Z3T8 1539 aa15.41■□□□□ 0.06
NEK3-203ENST00000551355 DUOX2Q9NRD8 1548 aa15.41■□□□□ 0.06
NEK3-203ENST00000551355 GCC2Q8IWJ2 1684 aa15.4■□□□□ 0.06
NEK3-203ENST00000551355 INO80Q9ULG1 1556 aaPredicted RBP15.4■□□□□ 0.06
NEK3-203ENST00000551355 TSPOAP1O95153 1857 aa15.4■□□□□ 0.06
NEK3-203ENST00000551355 ERBINQ96RT1 1412 aa15.39■□□□□ 0.05
NEK3-203ENST00000551355 ZMYM4Q5VZL5 1548 aa15.38■□□□□ 0.05
NEK3-203ENST00000551355 HECW2Q9P2P5 1572 aa15.38■□□□□ 0.05
NEK3-203ENST00000551355 DHX29Q7Z478 1369 aaKnown RBP15.37■□□□□ 0.05
NEK3-203ENST00000551355 RICTORQ6R327 1708 aa15.36■□□□□ 0.05
NEK3-203ENST00000551355 CCER1Q8TC90 406 aaPredicted RBP15.34■□□□□ 0.05
NEK3-203ENST00000551355 CLSPNQ9HAW4 1339 aa15.34■□□□□ 0.05
NEK3-203ENST00000551355 FRMPD1Q5SYB0 1578 aa15.33■□□□□ 0.05
NEK3-203ENST00000551355 TRIM52Q96A61 297 aa15.33■□□□□ 0.04
NEK3-203ENST00000551355 KIDINS220Q9ULH0 1771 aa15.33■□□□□ 0.04
NEK3-203ENST00000551355 A2MP01023 1474 aa15.33■□□□□ 0.04
NEK3-203ENST00000551355 COL17A1Q9UMD9 1497 aaPredicted RBP15.33■□□□□ 0.04
NEK3-203ENST00000551355 ATP10AO60312 1499 aa15.3■□□□□ 0.04
NEK3-203ENST00000551355 DHX57Q6P158 1386 aaKnown RBP15.3■□□□□ 0.04
NEK3-203ENST00000551355 NUP155O75694 1391 aa15.28■□□□□ 0.04
NEK3-203ENST00000551355 KDM6BO15054 1643 aa15.28■□□□□ 0.04
NEK3-203ENST00000551355 EIF2AK4Q9P2K8 1649 aaKnown RBP15.28■□□□□ 0.04
NEK3-203ENST00000551355 DIP2CQ9Y2E4 1556 aa15.28■□□□□ 0.04
NEK3-203ENST00000551355 YEATS2Q9ULM3 1422 aa15.27■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 54.1 ms