RNA–Protein interactions for RNA: ENST00000551223.5

PFDN5-215, Transcript of prefoldin subunit 5, humanhuman

TSL 4

Gene PFDN5, Length 478 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PFDN5-215ENST00000551223 ARHGAP5Q13017 1502 aa14.92□□□□□ -0.02
PFDN5-215ENST00000551223 GPATCH8Q9UKJ3 1502 aaKnown RBP14.92□□□□□ -0.02
PFDN5-215ENST00000551223 CDC42BPBQ9Y5S2 1711 aa14.91□□□□□ -0.02
PFDN5-215ENST00000551223 CCNB3Q8WWL7 1395 aa14.9□□□□□ -0.02
PFDN5-215ENST00000551223 CDC42BPAQ5VT25 1732 aa14.9□□□□□ -0.02
PFDN5-215ENST00000551223 PREX2Q70Z35 1606 aa14.9□□□□□ -0.02
PFDN5-215ENST00000551223 DENND4BO75064 1496 aaPredicted RBP14.89□□□□□ -0.03
PFDN5-215ENST00000551223 ADGRL1O94910 1474 aa14.89□□□□□ -0.03
PFDN5-215ENST00000551223 SCAPERQ9BY12 1400 aa14.89□□□□□ -0.03
PFDN5-215ENST00000551223 NCOA2Q15596 1464 aa14.89□□□□□ -0.03
PFDN5-215ENST00000551223 CFDP1Q9UEE9 299 aaPredicted RBP14.88□□□□□ -0.03
PFDN5-215ENST00000551223 SUPT6HQ7KZ85 1726 aaKnown RBP14.87□□□□□ -0.03
PFDN5-215ENST00000551223 FRMPD1Q5SYB0 1578 aa14.86□□□□□ -0.03
PFDN5-215ENST00000551223 ZNF777Q9ULD5 760 aaPredicted RBP14.86□□□□□ -0.03
PFDN5-215ENST00000551223 RICTORQ6R327 1708 aa14.84□□□□□ -0.03
PFDN5-215ENST00000551223 POGZQ7Z3K3 1410 aa14.83□□□□□ -0.03
PFDN5-215ENST00000551223 ARHGEF12Q9NZN5 1544 aa14.82□□□□□ -0.04
PFDN5-215ENST00000551223 AFAP1Q8N556 730 aa14.82□□□□□ -0.04
PFDN5-215ENST00000551223 ZNF644Q9H582 1327 aaPredicted RBP14.82□□□□□ -0.04
PFDN5-215ENST00000551223 ABCC1P33527 1531 aa14.82□□□□□ -0.04
PFDN5-215ENST00000551223 SAMD9LQ8IVG5 1584 aa14.81□□□□□ -0.04
PFDN5-215ENST00000551223 ITSN2Q9NZM3 1697 aa14.81□□□□□ -0.04
PFDN5-215ENST00000551223 HNRNPMP52272 730 aaKnown RBP eCLIP14.8□□□□□ -0.04
PFDN5-215ENST00000551223 TRAPPC8Q9Y2L5 1435 aa14.8□□□□□ -0.04
PFDN5-215ENST00000551223 ZMYM4Q5VZL5 1548 aa14.79□□□□□ -0.04
PFDN5-215ENST00000551223 ZNF518AQ6AHZ1 1483 aa14.79□□□□□ -0.04
PFDN5-215ENST00000551223 KIAA1107Q9UPP5 1409 aa14.79□□□□□ -0.04
PFDN5-215ENST00000551223 PLEKHH2Q8IVE3 1493 aa14.78□□□□□ -0.04
PFDN5-215ENST00000551223 SYCP2Q9BX26 1530 aa14.77□□□□□ -0.04
PFDN5-215ENST00000551223 MAGI2Q86UL8 1455 aa14.77□□□□□ -0.04
PFDN5-215ENST00000551223 MYOM3Q5VTT5 1437 aa14.76□□□□□ -0.05
PFDN5-215ENST00000551223 YEATS2Q9ULM3 1422 aa14.76□□□□□ -0.05
PFDN5-215ENST00000551223 KDM5CP41229 1560 aa14.76□□□□□ -0.05
PFDN5-215ENST00000551223 ZFYVE16Q7Z3T8 1539 aa14.75□□□□□ -0.05
PFDN5-215ENST00000551223 MIA2Q96PC5 1412 aa14.75□□□□□ -0.05
PFDN5-215ENST00000551223 MYT1LQ9UL68 1186 aa14.74□□□□□ -0.05
PFDN5-215ENST00000551223 ARHGEF40Q8TER5 1519 aa14.74□□□□□ -0.05
PFDN5-215ENST00000551223 CAMSAP2Q08AD1 1489 aa14.74□□□□□ -0.05
PFDN5-215ENST00000551223 MBD5Q9P267 1494 aa14.74□□□□□ -0.05
PFDN5-215ENST00000551223 MLH3Q9UHC1 1453 aa14.74□□□□□ -0.05
PFDN5-215ENST00000551223 PPARGC1BQ86YN6 1023 aaKnown RBP14.73□□□□□ -0.05
PFDN5-215ENST00000551223 KDM4FA0A1W2PPD8 638 aa14.72□□□□□ -0.05
PFDN5-215ENST00000551223 HECW2Q9P2P5 1572 aa14.72□□□□□ -0.05
PFDN5-215ENST00000551223 SPAG9O60271 1321 aaKnown RBP14.71□□□□□ -0.05
PFDN5-215ENST00000551223 ATP10AO60312 1499 aa14.7□□□□□ -0.06
PFDN5-215ENST00000551223 RSPH4AQ5TD94 716 aa14.7□□□□□ -0.06
PFDN5-215ENST00000551223 ARID4BQ4LE39 1312 aaPredicted RBP14.69□□□□□ -0.06
PFDN5-215ENST00000551223 FGD6Q6ZV73 1430 aa14.69□□□□□ -0.06
PFDN5-215ENST00000551223 KIDINS220Q9ULH0 1771 aa14.68□□□□□ -0.06
PFDN5-215ENST00000551223 CCDC141Q6ZP82 1450 aa14.68□□□□□ -0.06
PFDN5-215ENST00000551223 ARHGEF5Q12774 1597 aa14.67□□□□□ -0.06
PFDN5-215ENST00000551223 DIP2CQ9Y2E4 1556 aa14.67□□□□□ -0.06
PFDN5-215ENST00000551223 C9orf84Q5VXU9 1444 aa14.66□□□□□ -0.06
PFDN5-215ENST00000551223 ABCA6Q8N139 1617 aa14.66□□□□□ -0.06
PFDN5-215ENST00000551223 SIGLEC1Q9BZZ2 1709 aa14.66□□□□□ -0.06
PFDN5-215ENST00000551223 PTPN23Q9H3S7 1636 aa14.66□□□□□ -0.06
PFDN5-215ENST00000551223 ATP7AQ04656 1500 aa14.66□□□□□ -0.06
PFDN5-215ENST00000551223 INO80Q9ULG1 1556 aaPredicted RBP14.65□□□□□ -0.06
PFDN5-215ENST00000551223 TCOF1Q13428 1488 aaKnown RBP14.65□□□□□ -0.06
PFDN5-215ENST00000551223 TSPY4P0CV99 314 aa14.64□□□□□ -0.07
PFDN5-215ENST00000551223 TSPY10P0CW01 314 aa14.64□□□□□ -0.07
PFDN5-215ENST00000551223 RTEL1-TNFRSF6BF6WH68 1400 aa14.64□□□□□ -0.07
PFDN5-215ENST00000551223 MLECQ14165 292 aa14.62□□□□□ -0.07
PFDN5-215ENST00000551223 AEBP2Q6ZN18 517 aaPredicted RBP14.62□□□□□ -0.07
PFDN5-215ENST00000551223 REREQ9P2R6 1566 aa14.62□□□□□ -0.07
PFDN5-215ENST00000551223 BCORL1Q5H9F3 1711 aa14.61□□□□□ -0.07
PFDN5-215ENST00000551223 ABCC5O15440 1437 aa14.61□□□□□ -0.07
PFDN5-215ENST00000551223 FAM50AQ14320 339 aaKnown RBP14.61□□□□□ -0.07
PFDN5-215ENST00000551223 ADAMTSL3P82987 1691 aa14.6□□□□□ -0.07
PFDN5-215ENST00000551223 A2MP01023 1474 aa14.59□□□□□ -0.07
PFDN5-215ENST00000551223 AGLP35573 1532 aa14.59□□□□□ -0.07
PFDN5-215ENST00000551223 DAPK1P53355 1430 aa14.58□□□□□ -0.07
PFDN5-215ENST00000551223 MAST1Q9Y2H9 1570 aa14.58□□□□□ -0.08
PFDN5-215ENST00000551223 DNMT1P26358 1616 aaKnown RBP14.57□□□□□ -0.08
PFDN5-215ENST00000551223 ADGBQ8N7X0 1667 aa14.57□□□□□ -0.08
PFDN5-215ENST00000551223 DHX29Q7Z478 1369 aaKnown RBP14.57□□□□□ -0.08
PFDN5-215ENST00000551223 PLXNC1O60486 1568 aa14.56□□□□□ -0.08
PFDN5-215ENST00000551223 SHANK2Q9UPX8 1470 aa14.56□□□□□ -0.08
PFDN5-215ENST00000551223 MADDQ8WXG6 1647 aa14.55□□□□□ -0.08
PFDN5-215ENST00000551223 CHIC2Q9UKJ5 165 aa14.54□□□□□ -0.08
PFDN5-215ENST00000551223 CROCC2H7BZ55 1655 aa14.54□□□□□ -0.08
PFDN5-215ENST00000551223 PTPRMP28827 1452 aa14.52□□□□□ -0.08
PFDN5-215ENST00000551223 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP14.52□□□□□ -0.08
PFDN5-215ENST00000551223 RRP7BPQ9NSQ0 103 aa14.52□□□□□ -0.09
PFDN5-215ENST00000551223 RRBP1Q9P2E9 1410 aaKnown RBP14.51□□□□□ -0.09
PFDN5-215ENST00000551223 KIF3BO15066 747 aa14.51□□□□□ -0.09
PFDN5-215ENST00000551223 GGT6Q6P531 493 aa14.51□□□□□ -0.09
PFDN5-215ENST00000551223 RIMS1Q86UR5 1692 aaKnown RBP14.51□□□□□ -0.09
PFDN5-215ENST00000551223 PTPRKQ15262 1439 aa14.5□□□□□ -0.09
PFDN5-215ENST00000551223 FER1L4A9Z1Z3 1794 aa14.5□□□□□ -0.09
PFDN5-215ENST00000551223 ANKRD30AQ9BXX3 1397 aa14.5□□□□□ -0.09
PFDN5-215ENST00000551223 KIF15Q9NS87 1388 aa14.5□□□□□ -0.09
PFDN5-215ENST00000551223 NCOA1Q15788 1441 aa14.49□□□□□ -0.09
PFDN5-215ENST00000551223 ITGAEP38570 1179 aa14.49□□□□□ -0.09
PFDN5-215ENST00000551223 DUOX2Q9NRD8 1548 aa14.48□□□□□ -0.09
PFDN5-215ENST00000551223 ESF1Q9H501 851 aaKnown RBP14.48□□□□□ -0.09
PFDN5-215ENST00000551223 ADGRL2O95490 1459 aa14.48□□□□□ -0.09
PFDN5-215ENST00000551223 PLPPR3Q6T4P5 718 aa14.47□□□□□ -0.09
PFDN5-215ENST00000551223 CEBPAP49715 358 aaPredicted RBP14.46□□□□□ -0.09
PFDN5-215ENST00000551223 PPP6R1Q9UPN7 881 aa14.46□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 14.1 ms