RNA–Protein interactions for RNA: ENST00000550620.1

PDE1B-207, Transcript of phosphodiesterase 1B, humanhuman

TSL 1 (best) BASIC

Gene PDE1B, Length 2,150 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDE1B-207ENST00000550620 FAM9BQ8IZU0 186 aa20.58■□□□□ 0.88
PDE1B-207ENST00000550620 EPRSP07814 1512 aaKnown RBP20.57■□□□□ 0.88
PDE1B-207ENST00000550620 RPRD2Q5VT52 1461 aaKnown RBP20.57■□□□□ 0.88
PDE1B-207ENST00000550620 ROCK1Q13464 1354 aa20.56■□□□□ 0.88
PDE1B-207ENST00000550620 C11orf95C9JLR9 678 aaPredicted RBP20.55■□□□□ 0.88
PDE1B-207ENST00000550620 ANKRD30BQ9BXX2 1392 aa20.54■□□□□ 0.88
PDE1B-207ENST00000550620 TEX14Q8IWB6 1497 aa20.52■□□□□ 0.88
PDE1B-207ENST00000550620 PDS5BQ9NTI5 1447 aa20.51■□□□□ 0.87
PDE1B-207ENST00000550620 SPATA31E1Q6ZUB1 1445 aa20.5■□□□□ 0.87
PDE1B-207ENST00000550620 KIF7Q2M1P5 1343 aa20.5■□□□□ 0.87
PDE1B-207ENST00000550620 IQGAP2Q13576 1575 aa20.5■□□□□ 0.87
PDE1B-207ENST00000550620 DAPK1P53355 1430 aa20.49■□□□□ 0.87
PDE1B-207ENST00000550620 B4GALNT3Q6L9W6 998 aa20.49■□□□□ 0.87
PDE1B-207ENST00000550620 FOXD1Q16676 465 aa20.48■□□□□ 0.87
PDE1B-207ENST00000550620 NBPF8Q3BBV2 869 aa20.48■□□□□ 0.87
PDE1B-207ENST00000550620 WDR62O43379 1518 aa20.48■□□□□ 0.87
PDE1B-207ENST00000550620 POLR1AO95602 1720 aaPredicted RBP20.48■□□□□ 0.87
PDE1B-207ENST00000550620 CDK13Q14004 1512 aaKnown RBP20.48■□□□□ 0.87
PDE1B-207ENST00000550620 SMG6Q86US8 1419 aaKnown RBP20.45■□□□□ 0.86
PDE1B-207ENST00000550620 DNMT1P26358 1616 aaKnown RBP20.44■□□□□ 0.86
PDE1B-207ENST00000550620 SLC4A1APQ9BWU0 796 aaKnown RBP20.44■□□□□ 0.86
PDE1B-207ENST00000550620 TARBP1Q13395 1621 aaKnown RBP20.43■□□□□ 0.86
PDE1B-207ENST00000550620 ABCC5O15440 1437 aa20.42■□□□□ 0.86
PDE1B-207ENST00000550620 NUDCQ9Y266 331 aa20.39■□□□□ 0.85
PDE1B-207ENST00000550620 ARID4BQ4LE39 1312 aaPredicted RBP20.38■□□□□ 0.85
PDE1B-207ENST00000550620 PBRM1Q86U86 1689 aa20.38■□□□□ 0.85
PDE1B-207ENST00000550620 ADAMTS12P58397 1594 aa20.38■□□□□ 0.85
PDE1B-207ENST00000550620 NOP58Q9Y2X3 529 aaKnown RBP20.36■□□□□ 0.85
PDE1B-207ENST00000550620 DHX29Q7Z478 1369 aaKnown RBP20.36■□□□□ 0.85
PDE1B-207ENST00000550620 RNF123Q5XPI4 1314 aa20.35■□□□□ 0.85
PDE1B-207ENST00000550620 MBD5Q9P267 1494 aa20.34■□□□□ 0.85
PDE1B-207ENST00000550620 PZPP20742 1482 aa20.32■□□□□ 0.84
PDE1B-207ENST00000550620 USP47Q96K76 1375 aa20.32■□□□□ 0.84
PDE1B-207ENST00000550620 ARID3CA6NKF2 412 aa20.32■□□□□ 0.84
PDE1B-207ENST00000550620 ROCK2O75116 1388 aaKnown RBP20.31■□□□□ 0.84
PDE1B-207ENST00000550620 CCDC136Q96JN2 1154 aa20.31■□□□□ 0.84
PDE1B-207ENST00000550620 KIAA1107Q9UPP5 1409 aa20.3■□□□□ 0.84
PDE1B-207ENST00000550620 KIF14Q15058 1648 aa20.29■□□□□ 0.84
PDE1B-207ENST00000550620 ZNF644Q9H582 1327 aaPredicted RBP20.28■□□□□ 0.84
PDE1B-207ENST00000550620 ANP32AP39687 249 aaKnown RBP20.27■□□□□ 0.84
PDE1B-207ENST00000550620 NUP153P49790 1475 aaKnown RBP20.27■□□□□ 0.84
PDE1B-207ENST00000550620 KIAA0556O60303 1618 aa20.27■□□□□ 0.83
PDE1B-207ENST00000550620 DEKP35659 375 aaKnown RBP20.27■□□□□ 0.83
PDE1B-207ENST00000550620 KDM5CP41229 1560 aa20.24■□□□□ 0.83
PDE1B-207ENST00000550620 ADGRL2O95490 1459 aa20.24■□□□□ 0.83
PDE1B-207ENST00000550620 CAMSAP2Q08AD1 1489 aa20.24■□□□□ 0.83
PDE1B-207ENST00000550620 RAPGEF6Q8TEU7 1601 aa20.24■□□□□ 0.83
PDE1B-207ENST00000550620 POLR3GLQ9BT43 218 aa20.24■□□□□ 0.83
PDE1B-207ENST00000550620 ADGBQ8N7X0 1667 aa20.24■□□□□ 0.83
PDE1B-207ENST00000550620 KIAA0586Q9BVV6 1533 aa20.24■□□□□ 0.83
PDE1B-207ENST00000550620 BCORL1Q5H9F3 1711 aa20.23■□□□□ 0.83
PDE1B-207ENST00000550620 DISP1Q96F81 1524 aa20.23■□□□□ 0.83
PDE1B-207ENST00000550620 TMC1Q8TDI8 760 aa20.22■□□□□ 0.83
PDE1B-207ENST00000550620 PNISRQ8TF01 805 aaKnown RBP20.22■□□□□ 0.83
PDE1B-207ENST00000550620 TROQ12816 1431 aaPredicted RBP20.22■□□□□ 0.83
PDE1B-207ENST00000550620 UHRF1BP1Q6BDS2 1440 aa20.22■□□□□ 0.83
PDE1B-207ENST00000550620 ITSN2Q9NZM3 1697 aa20.22■□□□□ 0.83
PDE1B-207ENST00000550620 KTN1Q86UP2 1357 aaKnown RBP20.22■□□□□ 0.83
PDE1B-207ENST00000550620 IPO9Q96P70 1041 aaKnown RBP20.21■□□□□ 0.83
PDE1B-207ENST00000550620 CFDP1Q9UEE9 299 aaPredicted RBP20.21■□□□□ 0.83
PDE1B-207ENST00000550620 KIF15Q9NS87 1388 aa20.21■□□□□ 0.83
PDE1B-207ENST00000550620 RALGAPBQ86X10 1494 aa20.21■□□□□ 0.83
PDE1B-207ENST00000550620 ZNF326Q5BKZ1 582 aaKnown RBP20.2■□□□□ 0.82
PDE1B-207ENST00000550620 ANKRD30AQ9BXX3 1397 aa20.19■□□□□ 0.82
PDE1B-207ENST00000550620 PKD2Q13563 968 aa20.19■□□□□ 0.82
PDE1B-207ENST00000550620 CNGB1Q14028 1251 aaPredicted RBP20.18■□□□□ 0.82
PDE1B-207ENST00000550620 BRD4O60885 1362 aaPredicted RBP20.17■□□□□ 0.82
PDE1B-207ENST00000550620 PAK3O75914 559 aaPredicted RBP20.17■□□□□ 0.82
PDE1B-207ENST00000550620 ARHGEF12Q9NZN5 1544 aa20.16■□□□□ 0.82
PDE1B-207ENST00000550620 LRPPRCP42704 1394 aaKnown RBP20.16■□□□□ 0.82
PDE1B-207ENST00000550620 ZBTB47Q9UFB7 747 aaPredicted RBP20.16■□□□□ 0.82
PDE1B-207ENST00000550620 NBR1Q14596 966 aa20.15■□□□□ 0.82
PDE1B-207ENST00000550620 GPATCH8Q9UKJ3 1502 aaKnown RBP20.15■□□□□ 0.82
PDE1B-207ENST00000550620 PRG4Q92954 1404 aaPredicted RBP20.15■□□□□ 0.82
PDE1B-207ENST00000550620 CROCC2H7BZ55 1655 aa20.15■□□□□ 0.82
PDE1B-207ENST00000550620 RALBP1Q15311 655 aa20.15■□□□□ 0.82
PDE1B-207ENST00000550620 MRC2Q9UBG0 1479 aa20.15■□□□□ 0.82
PDE1B-207ENST00000550620 MYBBP1AQ9BQG0 1328 aaKnown RBP20.14■□□□□ 0.82
PDE1B-207ENST00000550620 CARD11Q9BXL7 1154 aa20.14■□□□□ 0.81
PDE1B-207ENST00000550620 ANKRD50Q9ULJ7 1429 aa20.14■□□□□ 0.81
PDE1B-207ENST00000550620 RTL5Q5HYW3 569 aaPredicted RBP20.12■□□□□ 0.81
PDE1B-207ENST00000550620 ADCY10Q96PN6 1610 aa20.12■□□□□ 0.81
PDE1B-207ENST00000550620 IFT140Q96RY7 1462 aa20.12■□□□□ 0.81
PDE1B-207ENST00000550620 RRP1P56182 461 aaKnown RBP20.1■□□□□ 0.81
PDE1B-207ENST00000550620 ZNF777Q9ULD5 760 aaPredicted RBP20.09■□□□□ 0.81
PDE1B-207ENST00000550620 SHANK2Q9UPX8 1470 aa20.08■□□□□ 0.81
PDE1B-207ENST00000550620 TCERG1O14776 1098 aaKnown RBP20.07■□□□□ 0.8
PDE1B-207ENST00000550620 GRIN2AQ12879 1464 aa20.07■□□□□ 0.8
PDE1B-207ENST00000550620 NUP155O75694 1391 aa20.07■□□□□ 0.8
PDE1B-207ENST00000550620 PDE3BQ13370 1112 aa20.07■□□□□ 0.8
PDE1B-207ENST00000550620 KDM5DQ9BY66 1539 aa20.07■□□□□ 0.8
PDE1B-207ENST00000550620 ST20-MTHFSA0A0A6YYL1 179 aa20.04■□□□□ 0.8
PDE1B-207ENST00000550620 RCAN3Q9UKA8 241 aa20.04■□□□□ 0.8
PDE1B-207ENST00000550620 ZNF608Q9ULD9 1512 aaPredicted RBP20.04■□□□□ 0.8
PDE1B-207ENST00000550620 E9PCH4 1651 aa20.03■□□□□ 0.8
PDE1B-207ENST00000550620 C9orf84Q5VXU9 1444 aa20.02■□□□□ 0.8
PDE1B-207ENST00000550620 NLRP13Q86W25 1043 aa20.02■□□□□ 0.8
PDE1B-207ENST00000550620 CEP170Q5SW79 1584 aa20.01■□□□□ 0.79
PDE1B-207ENST00000550620 PLB1Q6P1J6 1458 aa20.01■□□□□ 0.79
PDE1B-207ENST00000550620 MS4A1P11836 297 aa20■□□□□ 0.79
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms