RNA–Protein interactions for RNA: ENST00000550536.5

RAB3IP-212, Transcript of RAB3A interacting protein, humanhuman

TSL 1 (best) BASIC

Gene RAB3IP, Length 9,646 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB3IP-212ENST00000550536 RTF1Q92541 710 aaKnown RBP15.91■□□□□ 0.14
RAB3IP-212ENST00000550536 GNL2Q13823 731 aaKnown RBP15.91■□□□□ 0.14
RAB3IP-212ENST00000550536 EIF3AQ14152 1382 aaKnown RBP15.91■□□□□ 0.14
RAB3IP-212ENST00000550536 SETD5Q9C0A6 1442 aa15.91■□□□□ 0.14
RAB3IP-212ENST00000550536 MSNP26038 577 aaKnown RBP15.9■□□□□ 0.14
RAB3IP-212ENST00000550536 CLSTN1O94985 981 aa15.9■□□□□ 0.14
RAB3IP-212ENST00000550536 MORC1Q86VD1 984 aa15.9■□□□□ 0.14
RAB3IP-212ENST00000550536 DRC7Q8IY82 874 aa15.9■□□□□ 0.14
RAB3IP-212ENST00000550536 SIN3AQ96ST3 1273 aa15.9■□□□□ 0.14
RAB3IP-212ENST00000550536 ROCK2O75116 1388 aaKnown RBP15.89■□□□□ 0.13
RAB3IP-212ENST00000550536 L1TD1Q5T7N2 865 aaKnown RBP15.88■□□□□ 0.13
RAB3IP-212ENST00000550536 CARMIL1Q5VZK9 1371 aa15.87■□□□□ 0.13
RAB3IP-212ENST00000550536 KIAA1211Q6ZU35 1233 aa15.87■□□□□ 0.13
RAB3IP-212ENST00000550536 CALD1Q05682 793 aaKnown RBP15.87■□□□□ 0.13
RAB3IP-212ENST00000550536 B4GALNT3Q6L9W6 998 aa15.87■□□□□ 0.13
RAB3IP-212ENST00000550536 CARMIL2Q6F5E8 1435 aa15.86■□□□□ 0.13
RAB3IP-212ENST00000550536 IPO8O15397 1037 aaKnown RBP15.86■□□□□ 0.13
RAB3IP-212ENST00000550536 SOX12O15370 315 aa15.85■□□□□ 0.13
RAB3IP-212ENST00000550536 PTMSP20962 102 aa15.85■□□□□ 0.13
RAB3IP-212ENST00000550536 KIAA2012Q0VF49 1180 aa15.84■□□□□ 0.13
RAB3IP-212ENST00000550536 HDGFL2Q7Z4V5 671 aaPredicted RBP15.83■□□□□ 0.13
RAB3IP-212ENST00000550536 FMN1Q68DA7 1419 aa15.83■□□□□ 0.12
RAB3IP-212ENST00000550536 ISY1Q9ULR0 285 aaKnown RBP15.82■□□□□ 0.12
RAB3IP-212ENST00000550536 VPS8Q8N3P4 1428 aa15.82■□□□□ 0.12
RAB3IP-212ENST00000550536 SAFB2Q14151 953 aaKnown RBP eCLIP15.82■□□□□ 0.12
RAB3IP-212ENST00000550536 RTN4Q9NQC3 1192 aaKnown RBP15.82■□□□□ 0.12
RAB3IP-212ENST00000550536 TIMELESSQ9UNS1 1208 aa15.8■□□□□ 0.12
RAB3IP-212ENST00000550536 MLECQ14165 292 aa15.8■□□□□ 0.12
RAB3IP-212ENST00000550536 CCER2I3L3R5 266 aa15.8■□□□□ 0.12
RAB3IP-212ENST00000550536 GPATCH3Q96I76 525 aa15.8■□□□□ 0.12
RAB3IP-212ENST00000550536 SPRYD3Q8NCJ5 442 aa15.79■□□□□ 0.12
RAB3IP-212ENST00000550536 TRHP20396 242 aaPredicted RBP15.78■□□□□ 0.12
RAB3IP-212ENST00000550536 GBP4Q96PP9 640 aa15.78■□□□□ 0.12
RAB3IP-212ENST00000550536 SPAG9O60271 1321 aaKnown RBP15.78■□□□□ 0.12
RAB3IP-212ENST00000550536 PAK3O75914 559 aaPredicted RBP15.77■□□□□ 0.11
RAB3IP-212ENST00000550536 STK26Q9P289 416 aa15.77■□□□□ 0.11
RAB3IP-212ENST00000550536 CCDC18Q5T9S5 1454 aa15.76■□□□□ 0.11
RAB3IP-212ENST00000550536 TOP2AP11388 1531 aaKnown RBP15.76■□□□□ 0.11
RAB3IP-212ENST00000550536 ITPRIPQ8IWB1 547 aa15.76■□□□□ 0.11
RAB3IP-212ENST00000550536 SYAP1Q96A49 352 aaPredicted RBP15.76■□□□□ 0.11
RAB3IP-212ENST00000550536 CHMP4AQ9BY43 222 aa15.75■□□□□ 0.11
RAB3IP-212ENST00000550536 HTATSF1O43719 755 aaKnown RBP15.75■□□□□ 0.11
RAB3IP-212ENST00000550536 RALBP1Q15311 655 aa15.75■□□□□ 0.11
RAB3IP-212ENST00000550536 SOGA1O94964 1423 aa15.75■□□□□ 0.11
RAB3IP-212ENST00000550536 CCDC88BA6NC98 1476 aa15.74■□□□□ 0.11
RAB3IP-212ENST00000550536 TMX4Q9H1E5 349 aaPredicted RBP15.74■□□□□ 0.11
RAB3IP-212ENST00000550536 NOC3LQ8WTT2 800 aaKnown RBP15.74■□□□□ 0.11
RAB3IP-212ENST00000550536 APBB1O00213 710 aa15.73■□□□□ 0.11
RAB3IP-212ENST00000550536 NCBP3Q53F19 620 aaKnown RBP15.73■□□□□ 0.11
RAB3IP-212ENST00000550536 ANKRD30AQ9BXX3 1397 aa15.73■□□□□ 0.11
RAB3IP-212ENST00000550536 PDS5BQ9NTI5 1447 aa15.72■□□□□ 0.11
RAB3IP-212ENST00000550536 PKD2Q13563 968 aa15.72■□□□□ 0.11
RAB3IP-212ENST00000550536 RWDD1Q9H446 243 aaPredicted RBP15.72■□□□□ 0.11
RAB3IP-212ENST00000550536 RCAN3Q9UKA8 241 aa15.71■□□□□ 0.11
RAB3IP-212ENST00000550536 U2AF1L5P0DN76 240 aaPredicted RBP15.71■□□□□ 0.1
RAB3IP-212ENST00000550536 HSPA5P11021 654 aaKnown RBP15.71■□□□□ 0.1
RAB3IP-212ENST00000550536 U2AF1Q01081 240 aaKnown RBP eCLIP15.71■□□□□ 0.1
RAB3IP-212ENST00000550536 GGT6Q6P531 493 aa15.7■□□□□ 0.1
RAB3IP-212ENST00000550536 CECR2Q9BXF3 1484 aa15.7■□□□□ 0.1
RAB3IP-212ENST00000550536 NUP155O75694 1391 aa15.7■□□□□ 0.1
RAB3IP-212ENST00000550536 TPM4P67936 248 aa15.69■□□□□ 0.1
RAB3IP-212ENST00000550536 CCDC34Q96HJ3 373 aa15.69■□□□□ 0.1
RAB3IP-212ENST00000550536 CSB-PGBD3P0DP91 1061 aa15.68■□□□□ 0.1
RAB3IP-212ENST00000550536 PMFBP1Q8TBY8 1022 aa15.68■□□□□ 0.1
RAB3IP-212ENST00000550536 STK31Q9BXU1 1019 aa15.68■□□□□ 0.1
RAB3IP-212ENST00000550536 RAB3GAP2Q9H2M9 1393 aa15.68■□□□□ 0.1
RAB3IP-212ENST00000550536 ZNF330Q9Y3S2 320 aaPredicted RBP15.68■□□□□ 0.1
RAB3IP-212ENST00000550536 SMARCA4P51532 1647 aa15.67■□□□□ 0.1
RAB3IP-212ENST00000550536 HDAC5Q9UQL6 1122 aa15.67■□□□□ 0.1
RAB3IP-212ENST00000550536 GORABQ5T7V8 394 aa15.67■□□□□ 0.1
RAB3IP-212ENST00000550536 FOXD1Q16676 465 aa15.67■□□□□ 0.1
RAB3IP-212ENST00000550536 MROH2BQ7Z745 1585 aa15.67■□□□□ 0.1
RAB3IP-212ENST00000550536 CHMP3Q9Y3E7 222 aa15.67■□□□□ 0.1
RAB3IP-212ENST00000550536 CSPP1Q1MSJ5 1256 aa15.66■□□□□ 0.1
RAB3IP-212ENST00000550536 TERF2IPQ9NYB0 399 aa15.66■□□□□ 0.1
RAB3IP-212ENST00000550536 TRIM6-TRIM34B2RNG4 842 aa15.66■□□□□ 0.1
RAB3IP-212ENST00000550536 HMMRO75330 724 aa15.65■□□□□ 0.1
RAB3IP-212ENST00000550536 HSP90B1P14625 803 aaKnown RBP15.65■□□□□ 0.1
RAB3IP-212ENST00000550536 PHLDB1Q86UU1 1377 aa15.65■□□□□ 0.1
RAB3IP-212ENST00000550536 DEKP35659 375 aaKnown RBP15.65■□□□□ 0.1
RAB3IP-212ENST00000550536 TAF7LQ5H9L4 462 aa15.64■□□□□ 0.09
RAB3IP-212ENST00000550536 PHF14O94880 888 aa15.64■□□□□ 0.09
RAB3IP-212ENST00000550536 SMC4Q9NTJ3 1288 aa15.63■□□□□ 0.09
RAB3IP-212ENST00000550536 MPHOSPH9Q99550 1183 aa15.62■□□□□ 0.09
RAB3IP-212ENST00000550536 TCERG1O14776 1098 aaKnown RBP15.62■□□□□ 0.09
RAB3IP-212ENST00000550536 GZF1Q9H116 711 aaPredicted RBP15.61■□□□□ 0.09
RAB3IP-212ENST00000550536 LMOD3Q0VAK6 560 aa15.61■□□□□ 0.09
RAB3IP-212ENST00000550536 UACAQ9BZF9 1416 aa15.61■□□□□ 0.09
RAB3IP-212ENST00000550536 RBM19Q9Y4C8 960 aaKnown RBP15.6■□□□□ 0.09
RAB3IP-212ENST00000550536 EID1Q9Y6B2 187 aa15.6■□□□□ 0.09
RAB3IP-212ENST00000550536 SLKQ9H2G2 1235 aaPredicted RBP15.6■□□□□ 0.09
RAB3IP-212ENST00000550536 EFCAB2Q5VUJ9 269 aa15.58■□□□□ 0.09
RAB3IP-212ENST00000550536 KIF15Q9NS87 1388 aa15.58■□□□□ 0.08
RAB3IP-212ENST00000550536 MFAP1P55081 439 aaKnown RBP15.58■□□□□ 0.08
RAB3IP-212ENST00000550536 RAPGEF2Q9Y4G8 1499 aa15.57■□□□□ 0.08
RAB3IP-212ENST00000550536 GOLGA6L1Q8N7Z2 621 aa15.57■□□□□ 0.08
RAB3IP-212ENST00000550536 RASSF8Q8NHQ8 419 aa15.57■□□□□ 0.08
RAB3IP-212ENST00000550536 G3V3G9 751 aa15.56■□□□□ 0.08
RAB3IP-212ENST00000550536 DCAF8Q5TAQ9 597 aa15.56■□□□□ 0.08
RAB3IP-212ENST00000550536 CENPJQ9HC77 1338 aaPredicted RBP15.56■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms