RNA–Protein interactions for RNA: ENST00000550391.5

CACNB3-216, Transcript of calcium voltage-gated channel auxiliary subunit beta 3, humanhuman

TSL 5

Gene CACNB3, Length 754 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNB3-216ENST00000550391 PTPRMP28827 1452 aa21.65■■□□□ 1.06
CACNB3-216ENST00000550391 CERKQ8TCT0 537 aa21.65■■□□□ 1.06
CACNB3-216ENST00000550391 MYOM3Q5VTT5 1437 aa21.64■■□□□ 1.06
CACNB3-216ENST00000550391 KCNH8Q96L42 1107 aa21.64■■□□□ 1.05
CACNB3-216ENST00000550391 TTC37Q6PGP7 1564 aa21.63■■□□□ 1.05
CACNB3-216ENST00000550391 CCNB3Q8WWL7 1395 aa21.62■■□□□ 1.05
CACNB3-216ENST00000550391 TRIM26Q12899 539 aaPredicted RBP21.62■■□□□ 1.05
CACNB3-216ENST00000550391 ITSN2Q9NZM3 1697 aa21.62■■□□□ 1.05
CACNB3-216ENST00000550391 RRBP1Q9P2E9 1410 aaKnown RBP21.62■■□□□ 1.05
CACNB3-216ENST00000550391 CDC42BPAQ5VT25 1732 aa21.61■■□□□ 1.05
CACNB3-216ENST00000550391 GPATCH8Q9UKJ3 1502 aaKnown RBP21.6■■□□□ 1.05
CACNB3-216ENST00000550391 ABCA9Q8IUA7 1624 aa21.6■■□□□ 1.05
CACNB3-216ENST00000550391 FGD6Q6ZV73 1430 aa21.59■■□□□ 1.05
CACNB3-216ENST00000550391 MIA2Q96PC5 1412 aa21.58■■□□□ 1.05
CACNB3-216ENST00000550391 PREX2Q70Z35 1606 aa21.57■■□□□ 1.04
CACNB3-216ENST00000550391 MYO5CQ9NQX4 1742 aa21.57■■□□□ 1.04
CACNB3-216ENST00000550391 ADAMTSL3P82987 1691 aa21.55■■□□□ 1.04
CACNB3-216ENST00000550391 CDC42BPBQ9Y5S2 1711 aa21.55■■□□□ 1.04
CACNB3-216ENST00000550391 CD109Q6YHK3 1445 aa21.55■■□□□ 1.04
CACNB3-216ENST00000550391 PTPN23Q9H3S7 1636 aa21.54■■□□□ 1.04
CACNB3-216ENST00000550391 TCOF1Q13428 1488 aaKnown RBP21.52■■□□□ 1.04
CACNB3-216ENST00000550391 PLCH2O75038 1416 aa21.52■■□□□ 1.04
CACNB3-216ENST00000550391 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP21.51■■□□□ 1.03
CACNB3-216ENST00000550391 ARAP3Q8WWN8 1544 aa21.5■■□□□ 1.03
CACNB3-216ENST00000550391 CFDP1Q9UEE9 299 aaPredicted RBP21.5■■□□□ 1.03
CACNB3-216ENST00000550391 ARHGAP5Q13017 1502 aa21.47■■□□□ 1.03
CACNB3-216ENST00000550391 SPATA31D1Q6ZQQ2 1576 aa21.46■■□□□ 1.03
CACNB3-216ENST00000550391 CAMSAP2Q08AD1 1489 aa21.45■■□□□ 1.03
CACNB3-216ENST00000550391 FAM50AQ14320 339 aaKnown RBP21.45■■□□□ 1.02
CACNB3-216ENST00000550391 PCGF6Q9BYE7 350 aa21.44■■□□□ 1.02
CACNB3-216ENST00000550391 SAMD9LQ8IVG5 1584 aa21.44■■□□□ 1.02
CACNB3-216ENST00000550391 ZNF644Q9H582 1327 aaPredicted RBP21.43■■□□□ 1.02
CACNB3-216ENST00000550391 EFCAB2Q5VUJ9 269 aa21.41■■□□□ 1.02
CACNB3-216ENST00000550391 ZNF777Q9ULD5 760 aaPredicted RBP21.41■■□□□ 1.02
CACNB3-216ENST00000550391 HSPA2P54652 639 aa21.4■■□□□ 1.02
CACNB3-216ENST00000550391 FANCAO15360 1455 aa21.39■■□□□ 1.02
CACNB3-216ENST00000550391 BCORL1Q5H9F3 1711 aa21.38■■□□□ 1.01
CACNB3-216ENST00000550391 CFAP74Q9C0B2 1584 aa21.37■■□□□ 1.01
CACNB3-216ENST00000550391 PLEKHH2Q8IVE3 1493 aa21.37■■□□□ 1.01
CACNB3-216ENST00000550391 DNMT1P26358 1616 aaKnown RBP21.37■■□□□ 1.01
CACNB3-216ENST00000550391 ARID4BQ4LE39 1312 aaPredicted RBP21.36■■□□□ 1.01
CACNB3-216ENST00000550391 KIAA1107Q9UPP5 1409 aa21.36■■□□□ 1.01
CACNB3-216ENST00000550391 MADDQ8WXG6 1647 aa21.36■■□□□ 1.01
CACNB3-216ENST00000550391 ABCC1P33527 1531 aa21.35■■□□□ 1.01
CACNB3-216ENST00000550391 MBD5Q9P267 1494 aa21.34■■□□□ 1.01
CACNB3-216ENST00000550391 ARHGEF5Q12774 1597 aa21.34■■□□□ 1.01
CACNB3-216ENST00000550391 SYCP2Q9BX26 1530 aa21.34■■□□□ 1.01
CACNB3-216ENST00000550391 DAPK1P53355 1430 aa21.33■■□□□ 1.01
CACNB3-216ENST00000550391 NEO1Q92859 1461 aa21.32■■□□□ 1
CACNB3-216ENST00000550391 ABCC5O15440 1437 aa21.32■■□□□ 1
CACNB3-216ENST00000550391 AKNAQ7Z591 1439 aa21.32■■□□□ 1
CACNB3-216ENST00000550391 ITGAEP38570 1179 aa21.32■■□□□ 1
CACNB3-216ENST00000550391 ARHGEF12Q9NZN5 1544 aa21.32■■□□□ 1
CACNB3-216ENST00000550391 CROCC2H7BZ55 1655 aa21.31■■□□□ 1
CACNB3-216ENST00000550391 PTPRKQ15262 1439 aa21.31■■□□□ 1
CACNB3-216ENST00000550391 HNRNPMP52272 730 aaKnown RBP eCLIP21.3■■□□□ 1
CACNB3-216ENST00000550391 CCDC141Q6ZP82 1450 aa21.28■■□□□ 1
CACNB3-216ENST00000550391 RSPH4AQ5TD94 716 aa21.28■■□□□ 1
CACNB3-216ENST00000550391 FRMPD1Q5SYB0 1578 aa21.27■■□□□ 1
CACNB3-216ENST00000550391 DMRT2Q9Y5R5 561 aa21.27■■□□□ 1
CACNB3-216ENST00000550391 SCAPERQ9BY12 1400 aa21.26■□□□□ 0.99
CACNB3-216ENST00000550391 SHANK2Q9UPX8 1470 aa21.26■□□□□ 0.99
CACNB3-216ENST00000550391 RIMS1Q86UR5 1692 aaKnown RBP21.24■□□□□ 0.99
CACNB3-216ENST00000550391 TRAPPC8Q9Y2L5 1435 aa21.24■□□□□ 0.99
CACNB3-216ENST00000550391 RAPGEF3O95398 923 aa21.23■□□□□ 0.99
CACNB3-216ENST00000550391 MAST1Q9Y2H9 1570 aa21.23■□□□□ 0.99
CACNB3-216ENST00000550391 ADGBQ8N7X0 1667 aa21.22■□□□□ 0.99
CACNB3-216ENST00000550391 ROCK1Q13464 1354 aa21.21■□□□□ 0.99
CACNB3-216ENST00000550391 C9orf84Q5VXU9 1444 aa21.21■□□□□ 0.99
CACNB3-216ENST00000550391 ADGRL2O95490 1459 aa21.2■□□□□ 0.98
CACNB3-216ENST00000550391 TSPY4P0CV99 314 aa21.2■□□□□ 0.98
CACNB3-216ENST00000550391 TSPY10P0CW01 314 aa21.2■□□□□ 0.98
CACNB3-216ENST00000550391 CHIC2Q9UKJ5 165 aa21.19■□□□□ 0.98
CACNB3-216ENST00000550391 POGZQ7Z3K3 1410 aa21.19■□□□□ 0.98
CACNB3-216ENST00000550391 DENND4BO75064 1496 aaPredicted RBP21.18■□□□□ 0.98
CACNB3-216ENST00000550391 ZNF518AQ6AHZ1 1483 aa21.18■□□□□ 0.98
CACNB3-216ENST00000550391 ARHGEF40Q8TER5 1519 aa21.18■□□□□ 0.98
CACNB3-216ENST00000550391 AFAP1Q8N556 730 aa21.17■□□□□ 0.98
CACNB3-216ENST00000550391 HFM1A2PYH4 1435 aa21.17■□□□□ 0.98
CACNB3-216ENST00000550391 YEATS2Q9ULM3 1422 aa21.17■□□□□ 0.98
CACNB3-216ENST00000550391 RICTORQ6R327 1708 aa21.16■□□□□ 0.98
CACNB3-216ENST00000550391 KDM5CP41229 1560 aa21.16■□□□□ 0.98
CACNB3-216ENST00000550391 PLPPR3Q6T4P5 718 aa21.16■□□□□ 0.98
CACNB3-216ENST00000550391 GCC2Q8IWJ2 1684 aa21.15■□□□□ 0.98
CACNB3-216ENST00000550391 NCOA1Q15788 1441 aa21.15■□□□□ 0.98
CACNB3-216ENST00000550391 RTEL1-TNFRSF6BF6WH68 1400 aa21.14■□□□□ 0.98
CACNB3-216ENST00000550391 ANKRD30AQ9BXX3 1397 aa21.14■□□□□ 0.98
CACNB3-216ENST00000550391 INO80Q9ULG1 1556 aaPredicted RBP21.14■□□□□ 0.97
CACNB3-216ENST00000550391 NAIPQ13075 1403 aa21.13■□□□□ 0.97
CACNB3-216ENST00000550391 PLXNC1O60486 1568 aa21.13■□□□□ 0.97
CACNB3-216ENST00000550391 ZFYVE16Q7Z3T8 1539 aa21.13■□□□□ 0.97
CACNB3-216ENST00000550391 SETD5Q9C0A6 1442 aa21.12■□□□□ 0.97
CACNB3-216ENST00000550391 SPAG9O60271 1321 aaKnown RBP21.12■□□□□ 0.97
CACNB3-216ENST00000550391 RRP7BPQ9NSQ0 103 aa21.12■□□□□ 0.97
CACNB3-216ENST00000550391 ATP7AQ04656 1500 aa21.1■□□□□ 0.97
CACNB3-216ENST00000550391 MLH3Q9UHC1 1453 aa21.09■□□□□ 0.97
CACNB3-216ENST00000550391 KIDINS220Q9ULH0 1771 aa21.09■□□□□ 0.97
CACNB3-216ENST00000550391 IQSEC2Q5JU85 1478 aa21.07■□□□□ 0.96
CACNB3-216ENST00000550391 ZMYM4Q5VZL5 1548 aa21.07■□□□□ 0.96
CACNB3-216ENST00000550391 RAB3GAP2Q9H2M9 1393 aa21.07■□□□□ 0.96
Retrieved 100 of 20,778 RNA–protein pairs in 16.2 ms