RNA–Protein interactions for RNA: ENST00000550168.5

CACNB3-214, Transcript of calcium voltage-gated channel auxiliary subunit beta 3, humanhuman

TSL 4

Gene CACNB3, Length 677 nt, Biotype processed transcript, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNB3-214ENST00000550168 TCOF1Q13428 1488 aaKnown RBP18.88■□□□□ 0.61
CACNB3-214ENST00000550168 KIF14Q15058 1648 aa18.86■□□□□ 0.61
CACNB3-214ENST00000550168 ITSN2Q9NZM3 1697 aa18.85■□□□□ 0.61
CACNB3-214ENST00000550168 KDM5BQ9UGL1 1544 aa18.84■□□□□ 0.61
CACNB3-214ENST00000550168 COL17A1Q9UMD9 1497 aaPredicted RBP18.84■□□□□ 0.61
CACNB3-214ENST00000550168 PTPN23Q9H3S7 1636 aa18.83■□□□□ 0.61
CACNB3-214ENST00000550168 FAM50AQ14320 339 aaKnown RBP18.82■□□□□ 0.6
CACNB3-214ENST00000550168 ARID3CA6NKF2 412 aa18.81■□□□□ 0.6
CACNB3-214ENST00000550168 PPRC1Q5VV67 1664 aaKnown RBP18.8■□□□□ 0.6
CACNB3-214ENST00000550168 GPATCH8Q9UKJ3 1502 aaKnown RBP18.75■□□□□ 0.59
CACNB3-214ENST00000550168 ZCCHC11Q5TAX3 1644 aaKnown RBP18.75■□□□□ 0.59
CACNB3-214ENST00000550168 ACIN1Q9UKV3 1341 aaKnown RBP18.74■□□□□ 0.59
CACNB3-214ENST00000550168 AKNAQ7Z591 1439 aa18.74■□□□□ 0.59
CACNB3-214ENST00000550168 CCER1Q8TC90 406 aaPredicted RBP18.74■□□□□ 0.59
CACNB3-214ENST00000550168 PTPRMP28827 1452 aa18.73■□□□□ 0.59
CACNB3-214ENST00000550168 SETD5Q9C0A6 1442 aa18.72■□□□□ 0.59
CACNB3-214ENST00000550168 CLSPNQ9HAW4 1339 aa18.72■□□□□ 0.59
CACNB3-214ENST00000550168 CFDP1Q9UEE9 299 aaPredicted RBP18.71■□□□□ 0.59
CACNB3-214ENST00000550168 HFM1A2PYH4 1435 aa18.69■□□□□ 0.58
CACNB3-214ENST00000550168 ITGAEP38570 1179 aa18.68■□□□□ 0.58
CACNB3-214ENST00000550168 DNMT1P26358 1616 aaKnown RBP18.67■□□□□ 0.58
CACNB3-214ENST00000550168 CAMSAP2Q08AD1 1489 aa18.67■□□□□ 0.58
CACNB3-214ENST00000550168 ROCK1Q13464 1354 aa18.67■□□□□ 0.58
CACNB3-214ENST00000550168 PREX2Q70Z35 1606 aa18.67■□□□□ 0.58
CACNB3-214ENST00000550168 WDR7Q9Y4E6 1490 aa18.66■□□□□ 0.58
CACNB3-214ENST00000550168 CDC42BPAQ5VT25 1732 aa18.66■□□□□ 0.58
CACNB3-214ENST00000550168 ARAP3Q8WWN8 1544 aa18.65■□□□□ 0.58
CACNB3-214ENST00000550168 DAPK1P53355 1430 aa18.65■□□□□ 0.58
CACNB3-214ENST00000550168 PLEKHH2Q8IVE3 1493 aa18.65■□□□□ 0.58
CACNB3-214ENST00000550168 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP18.64■□□□□ 0.58
CACNB3-214ENST00000550168 RSPH4AQ5TD94 716 aa18.64■□□□□ 0.57
CACNB3-214ENST00000550168 RAB3GAP2Q9H2M9 1393 aa18.64■□□□□ 0.57
CACNB3-214ENST00000550168 HSPA2P54652 639 aa18.63■□□□□ 0.57
CACNB3-214ENST00000550168 GLI2P10070 1586 aa18.63■□□□□ 0.57
CACNB3-214ENST00000550168 SHANK2Q9UPX8 1470 aa18.62■□□□□ 0.57
CACNB3-214ENST00000550168 MYO5CQ9NQX4 1742 aa18.6■□□□□ 0.57
CACNB3-214ENST00000550168 ARHGEF5Q12774 1597 aa18.6■□□□□ 0.57
CACNB3-214ENST00000550168 ABCC5O15440 1437 aa18.6■□□□□ 0.57
CACNB3-214ENST00000550168 PTPRKQ15262 1439 aa18.6■□□□□ 0.57
CACNB3-214ENST00000550168 GCC2Q8IWJ2 1684 aa18.6■□□□□ 0.57
CACNB3-214ENST00000550168 TTC37Q6PGP7 1564 aa18.59■□□□□ 0.57
CACNB3-214ENST00000550168 PLCH2O75038 1416 aa18.58■□□□□ 0.57
CACNB3-214ENST00000550168 NAIPQ13075 1403 aa18.58■□□□□ 0.57
CACNB3-214ENST00000550168 DHX57Q6P158 1386 aaKnown RBP18.58■□□□□ 0.57
CACNB3-214ENST00000550168 KIAA1107Q9UPP5 1409 aa18.57■□□□□ 0.56
CACNB3-214ENST00000550168 ARHGAP5Q13017 1502 aa18.57■□□□□ 0.56
CACNB3-214ENST00000550168 ADGRL2O95490 1459 aa18.57■□□□□ 0.56
CACNB3-214ENST00000550168 TEX14Q8IWB6 1497 aa18.57■□□□□ 0.56
CACNB3-214ENST00000550168 ASXL2Q76L83 1435 aa18.57■□□□□ 0.56
CACNB3-214ENST00000550168 CROCC2H7BZ55 1655 aa18.56■□□□□ 0.56
CACNB3-214ENST00000550168 ABCA9Q8IUA7 1624 aa18.55■□□□□ 0.56
CACNB3-214ENST00000550168 CDC42BPBQ9Y5S2 1711 aa18.54■□□□□ 0.56
CACNB3-214ENST00000550168 ADGBQ8N7X0 1667 aa18.54■□□□□ 0.56
CACNB3-214ENST00000550168 ADAMTSL3P82987 1691 aa18.54■□□□□ 0.56
CACNB3-214ENST00000550168 EFCAB2Q5VUJ9 269 aa18.53■□□□□ 0.56
CACNB3-214ENST00000550168 ZNF777Q9ULD5 760 aaPredicted RBP18.53■□□□□ 0.56
CACNB3-214ENST00000550168 ANKRD30AQ9BXX3 1397 aa18.53■□□□□ 0.56
CACNB3-214ENST00000550168 CCDC141Q6ZP82 1450 aa18.52■□□□□ 0.56
CACNB3-214ENST00000550168 ZNF644Q9H582 1327 aaPredicted RBP18.52■□□□□ 0.56
CACNB3-214ENST00000550168 SAMD9LQ8IVG5 1584 aa18.52■□□□□ 0.56
CACNB3-214ENST00000550168 KCNH8Q96L42 1107 aa18.51■□□□□ 0.55
CACNB3-214ENST00000550168 MBD5Q9P267 1494 aa18.51■□□□□ 0.55
CACNB3-214ENST00000550168 TSPY4P0CV99 314 aa18.5■□□□□ 0.55
CACNB3-214ENST00000550168 TSPY10P0CW01 314 aa18.5■□□□□ 0.55
CACNB3-214ENST00000550168 MAST1Q9Y2H9 1570 aa18.48■□□□□ 0.55
CACNB3-214ENST00000550168 NCOA1Q15788 1441 aa18.48■□□□□ 0.55
CACNB3-214ENST00000550168 C9orf84Q5VXU9 1444 aa18.48■□□□□ 0.55
CACNB3-214ENST00000550168 CFAP74Q9C0B2 1584 aa18.46■□□□□ 0.55
CACNB3-214ENST00000550168 ABCC1P33527 1531 aa18.45■□□□□ 0.54
CACNB3-214ENST00000550168 CHIC2Q9UKJ5 165 aa18.45■□□□□ 0.54
CACNB3-214ENST00000550168 MAP3K4Q9Y6R4 1608 aa18.45■□□□□ 0.54
CACNB3-214ENST00000550168 SYCP2Q9BX26 1530 aa18.44■□□□□ 0.54
CACNB3-214ENST00000550168 MED1Q15648 1581 aaPredicted RBP18.44■□□□□ 0.54
CACNB3-214ENST00000550168 RRP7BPQ9NSQ0 103 aa18.43■□□□□ 0.54
CACNB3-214ENST00000550168 FANCAO15360 1455 aa18.41■□□□□ 0.54
CACNB3-214ENST00000550168 PLXNC1O60486 1568 aa18.4■□□□□ 0.54
CACNB3-214ENST00000550168 HNRNPMP52272 730 aaKnown RBP eCLIP18.39■□□□□ 0.53
CACNB3-214ENST00000550168 RTEL1-TNFRSF6BF6WH68 1400 aa18.39■□□□□ 0.53
CACNB3-214ENST00000550168 TIMELESSQ9UNS1 1208 aa18.38■□□□□ 0.53
CACNB3-214ENST00000550168 ANKRD50Q9ULJ7 1429 aa18.38■□□□□ 0.53
CACNB3-214ENST00000550168 CD109Q6YHK3 1445 aa18.37■□□□□ 0.53
CACNB3-214ENST00000550168 MADDQ8WXG6 1647 aa18.36■□□□□ 0.53
CACNB3-214ENST00000550168 KIF15Q9NS87 1388 aa18.36■□□□□ 0.53
CACNB3-214ENST00000550168 DMRT2Q9Y5R5 561 aa18.36■□□□□ 0.53
CACNB3-214ENST00000550168 IQSEC2Q5JU85 1478 aa18.35■□□□□ 0.53
CACNB3-214ENST00000550168 NEO1Q92859 1461 aa18.35■□□□□ 0.53
CACNB3-214ENST00000550168 ARHGEF12Q9NZN5 1544 aa18.33■□□□□ 0.53
CACNB3-214ENST00000550168 PHF23Q9BUL5 403 aaPredicted RBP18.33■□□□□ 0.52
CACNB3-214ENST00000550168 DUOX2Q9NRD8 1548 aa18.32■□□□□ 0.52
CACNB3-214ENST00000550168 TRIM52Q96A61 297 aa18.31■□□□□ 0.52
CACNB3-214ENST00000550168 KDM5DQ9BY66 1539 aa18.31■□□□□ 0.52
CACNB3-214ENST00000550168 ERBINQ96RT1 1412 aa18.31■□□□□ 0.52
CACNB3-214ENST00000550168 BCORL1Q5H9F3 1711 aa18.29■□□□□ 0.52
CACNB3-214ENST00000550168 ZNF518AQ6AHZ1 1483 aa18.29■□□□□ 0.52
CACNB3-214ENST00000550168 SCAPERQ9BY12 1400 aa18.29■□□□□ 0.52
CACNB3-214ENST00000550168 TRAPPC8Q9Y2L5 1435 aa18.29■□□□□ 0.52
CACNB3-214ENST00000550168 SPAG9O60271 1321 aaKnown RBP18.28■□□□□ 0.52
CACNB3-214ENST00000550168 MPHOSPH9Q99550 1183 aa18.27■□□□□ 0.52
CACNB3-214ENST00000550168 ZFYVE16Q7Z3T8 1539 aa18.27■□□□□ 0.51
CACNB3-214ENST00000550168 YEATS2Q9ULM3 1422 aa18.26■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms