RNA–Protein interactions for RNA: ENST00000550149.5

RACGAP1-219, Transcript of Rac GTPase activating protein 1, humanhuman

TSL 4

Gene RACGAP1, Length 570 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RACGAP1-219ENST00000550149 KIF14Q15058 1648 aa29.03■■■□□ 2.24
RACGAP1-219ENST00000550149 CLIP1P30622 1438 aa29.03■■■□□ 2.24
RACGAP1-219ENST00000550149 CASKIN1Q8WXD9 1431 aa29.03■■■□□ 2.24
RACGAP1-219ENST00000550149 MADDQ8WXG6 1647 aa29.02■■■□□ 2.24
RACGAP1-219ENST00000550149 MYO5CQ9NQX4 1742 aa28.99■■■□□ 2.23
RACGAP1-219ENST00000550149 LRRIQ1Q96JM4 1722 aa28.98■■■□□ 2.23
RACGAP1-219ENST00000550149 ILDR1Q86SU0 546 aaPredicted RBP28.96■■■□□ 2.23
RACGAP1-219ENST00000550149 CCDC18Q5T9S5 1454 aa28.96■■■□□ 2.23
RACGAP1-219ENST00000550149 PCF11O94913 1555 aaKnown RBP28.94■■■□□ 2.22
RACGAP1-219ENST00000550149 SIGLEC1Q9BZZ2 1709 aa28.93■■■□□ 2.22
RACGAP1-219ENST00000550149 ARHGAP5Q13017 1502 aa28.93■■■□□ 2.22
RACGAP1-219ENST00000550149 ATP10AO60312 1499 aa28.92■■■□□ 2.22
RACGAP1-219ENST00000550149 ZNF518AQ6AHZ1 1483 aa28.91■■■□□ 2.22
RACGAP1-219ENST00000550149 AFAP1Q8N556 730 aa28.89■■■□□ 2.22
RACGAP1-219ENST00000550149 FYCO1Q9BQS8 1478 aa28.88■■■□□ 2.21
RACGAP1-219ENST00000550149 RIMS1Q86UR5 1692 aaKnown RBP28.88■■■□□ 2.21
RACGAP1-219ENST00000550149 C9orf84Q5VXU9 1444 aa28.87■■■□□ 2.21
RACGAP1-219ENST00000550149 KDM5CP41229 1560 aa28.86■■■□□ 2.21
RACGAP1-219ENST00000550149 LMTK3Q96Q04 1460 aa28.85■■■□□ 2.21
RACGAP1-219ENST00000550149 MLECQ14165 292 aa28.84■■■□□ 2.21
RACGAP1-219ENST00000550149 CDC42BPBQ9Y5S2 1711 aa28.82■■■□□ 2.2
RACGAP1-219ENST00000550149 ARHGEF12Q9NZN5 1544 aa28.8■■■□□ 2.2
RACGAP1-219ENST00000550149 PREX2Q70Z35 1606 aa28.8■■■□□ 2.2
RACGAP1-219ENST00000550149 MLH3Q9UHC1 1453 aa28.78■■■□□ 2.2
RACGAP1-219ENST00000550149 TRAPPC8Q9Y2L5 1435 aa28.77■■■□□ 2.2
RACGAP1-219ENST00000550149 ABCC1P33527 1531 aa28.76■■■□□ 2.19
RACGAP1-219ENST00000550149 PLPPR3Q6T4P5 718 aa28.73■■■□□ 2.19
RACGAP1-219ENST00000550149 REREQ9P2R6 1566 aa28.72■■■□□ 2.19
RACGAP1-219ENST00000550149 DIP2CQ9Y2E4 1556 aa28.72■■■□□ 2.19
RACGAP1-219ENST00000550149 MYT1LQ9UL68 1186 aa28.72■■■□□ 2.19
RACGAP1-219ENST00000550149 FER1L4A9Z1Z3 1794 aa28.72■■■□□ 2.19
RACGAP1-219ENST00000550149 GPATCH8Q9UKJ3 1502 aaKnown RBP28.7■■■□□ 2.19
RACGAP1-219ENST00000550149 CDC42BPAQ5VT25 1732 aa28.69■■■□□ 2.18
RACGAP1-219ENST00000550149 HSPA2P54652 639 aa28.68■■■□□ 2.18
RACGAP1-219ENST00000550149 ITSN2Q9NZM3 1697 aa28.67■■■□□ 2.18
RACGAP1-219ENST00000550149 ABCA6Q8N139 1617 aa28.66■■■□□ 2.18
RACGAP1-219ENST00000550149 AGLP35573 1532 aa28.64■■■□□ 2.18
RACGAP1-219ENST00000550149 CEBPAP49715 358 aaPredicted RBP28.63■■■□□ 2.17
RACGAP1-219ENST00000550149 ZNF777Q9ULD5 760 aaPredicted RBP28.63■■■□□ 2.17
RACGAP1-219ENST00000550149 SAMD9LQ8IVG5 1584 aa28.62■■■□□ 2.17
RACGAP1-219ENST00000550149 MTUS2Q5JR59 1369 aa28.6■■■□□ 2.17
RACGAP1-219ENST00000550149 KIAA1107Q9UPP5 1409 aa28.6■■■□□ 2.17
RACGAP1-219ENST00000550149 CFDP1Q9UEE9 299 aaPredicted RBP28.59■■■□□ 2.17
RACGAP1-219ENST00000550149 KIDINS220Q9ULH0 1771 aa28.59■■■□□ 2.17
RACGAP1-219ENST00000550149 HNRNPMP52272 730 aaKnown RBP eCLIP28.58■■■□□ 2.179e-9■■□□□ 14.1
RACGAP1-219ENST00000550149 FBXO41Q8TF61 875 aa28.58■■■□□ 2.17
RACGAP1-219ENST00000550149 CCNB3Q8WWL7 1395 aa28.58■■■□□ 2.17
RACGAP1-219ENST00000550149 CEP162Q5TB80 1403 aa28.57■■■□□ 2.16
RACGAP1-219ENST00000550149 SYCP2Q9BX26 1530 aa28.56■■■□□ 2.16
RACGAP1-219ENST00000550149 PLEKHH2Q8IVE3 1493 aa28.55■■■□□ 2.16
RACGAP1-219ENST00000550149 SPAG9O60271 1321 aaKnown RBP28.55■■■□□ 2.16
RACGAP1-219ENST00000550149 PREX1Q8TCU6 1659 aa28.5■■■□□ 2.15
RACGAP1-219ENST00000550149 EHBP1L1Q8N3D4 1523 aa28.48■■■□□ 2.15
RACGAP1-219ENST00000550149 ESF1Q9H501 851 aaKnown RBP28.48■■■□□ 2.15
RACGAP1-219ENST00000550149 CNTLNQ9NXG0 1405 aa28.47■■■□□ 2.15
RACGAP1-219ENST00000550149 UHRF1BP1Q6BDS2 1440 aa28.46■■■□□ 2.15
RACGAP1-219ENST00000550149 ATP7AQ04656 1500 aa28.45■■■□□ 2.15
RACGAP1-219ENST00000550149 TIAM1Q13009 1591 aa28.45■■■□□ 2.14
RACGAP1-219ENST00000550149 ZNF644Q9H582 1327 aaPredicted RBP28.43■■■□□ 2.14
RACGAP1-219ENST00000550149 SETD1BQ9UPS6 1966 aaKnown RBP28.42■■■□□ 2.14
RACGAP1-219ENST00000550149 C3P01024 1663 aa28.42■■■□□ 2.14
RACGAP1-219ENST00000550149 INO80Q9ULG1 1556 aaPredicted RBP28.42■■■□□ 2.14
RACGAP1-219ENST00000550149 MBD5Q9P267 1494 aa28.41■■■□□ 2.14
RACGAP1-219ENST00000550149 A2MP01023 1474 aa28.4■■■□□ 2.14
RACGAP1-219ENST00000550149 PLXNC1O60486 1568 aa28.39■■■□□ 2.14
RACGAP1-219ENST00000550149 DMRT2Q9Y5R5 561 aa28.37■■■□□ 2.13
RACGAP1-219ENST00000550149 ZMYM3Q14202 1370 aa28.35■■■□□ 2.13
RACGAP1-219ENST00000550149 RTEL1-TNFRSF6BF6WH68 1400 aa28.35■■■□□ 2.13
RACGAP1-219ENST00000550149 CERKQ8TCT0 537 aa28.34■■■□□ 2.13
RACGAP1-219ENST00000550149 NPATQ14207 1427 aa28.34■■■□□ 2.13
RACGAP1-219ENST00000550149 NCOA2Q15596 1464 aa28.34■■■□□ 2.13
RACGAP1-219ENST00000550149 LOC105371045A0A1W2PR82 267 aa28.33■■■□□ 2.13
RACGAP1-219ENST00000550149 MROH2AA6NES4 1674 aa28.32■■■□□ 2.12
RACGAP1-219ENST00000550149 SUPT6HQ7KZ85 1726 aaKnown RBP28.32■■■□□ 2.12
RACGAP1-219ENST00000550149 STRCQ7RTU9 1775 aa28.32■■■□□ 2.12
RACGAP1-219ENST00000550149 PPP6R1Q9UPN7 881 aa28.3■■■□□ 2.12
RACGAP1-219ENST00000550149 VPS8Q8N3P4 1428 aa28.29■■■□□ 2.12
RACGAP1-219ENST00000550149 RSPH4AQ5TD94 716 aa28.27■■■□□ 2.12
RACGAP1-219ENST00000550149 GGT6Q6P531 493 aa28.27■■■□□ 2.12
RACGAP1-219ENST00000550149 PTPRTO14522 1441 aa28.26■■■□□ 2.11
RACGAP1-219ENST00000550149 ADGBQ8N7X0 1667 aa28.26■■■□□ 2.11
RACGAP1-219ENST00000550149 DHX29Q7Z478 1369 aaKnown RBP28.25■■■□□ 2.11
RACGAP1-219ENST00000550149 CAMSAP2Q08AD1 1489 aa28.24■■■□□ 2.11
RACGAP1-219ENST00000550149 CCDC141Q6ZP82 1450 aa28.23■■■□□ 2.11
RACGAP1-219ENST00000550149 LRRC9Q6ZRR7 1453 aa28.22■■■□□ 2.11
RACGAP1-219ENST00000550149 NCOA1Q15788 1441 aa28.22■■■□□ 2.11
RACGAP1-219ENST00000550149 PTPRKQ15262 1439 aa28.21■■■□□ 2.11
RACGAP1-219ENST00000550149 CLTCQ00610 1675 aaKnown RBP28.2■■■□□ 2.11
RACGAP1-219ENST00000550149 MAP3K1Q13233 1512 aa28.17■■■□□ 2.1
RACGAP1-219ENST00000550149 ARHGEF5Q12774 1597 aa28.15■■■□□ 2.1
RACGAP1-219ENST00000550149 KANK4Q5T7N3 995 aaPredicted RBP28.14■■■□□ 2.1
RACGAP1-219ENST00000550149 KIF3BO15066 747 aa28.13■■■□□ 2.09
RACGAP1-219ENST00000550149 CAMSAP1Q5T5Y3 1602 aa28.13■■■□□ 2.09
RACGAP1-219ENST00000550149 TSPY4P0CV99 314 aa28.11■■■□□ 2.09
RACGAP1-219ENST00000550149 TSPY10P0CW01 314 aa28.11■■■□□ 2.09
RACGAP1-219ENST00000550149 MYO3AQ8NEV4 1616 aa28.08■■■□□ 2.09
RACGAP1-219ENST00000550149 FAM135AQ9P2D6 1515 aa28.08■■■□□ 2.08
RACGAP1-219ENST00000550149 ZNF142P52746 1687 aaPredicted RBP28.07■■■□□ 2.08
RACGAP1-219ENST00000550149 PLA2R1Q13018 1463 aa28.07■■■□□ 2.08
RACGAP1-219ENST00000550149 CEP170BQ9Y4F5 1589 aaPredicted RBP28.07■■■□□ 2.08
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms