RNA–Protein interactions for RNA: ENST00000550146.5

TMEM106C-213, Transcript of transmembrane protein 106C, humanhuman

TSL 3

Gene TMEM106C, Length 663 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM106C-213ENST00000550146 DENND4BO75064 1496 aaPredicted RBP10.21□□□□□ -0.78
TMEM106C-213ENST00000550146 KDM4FA0A1W2PPD8 638 aa10.2□□□□□ -0.78
TMEM106C-213ENST00000550146 CDC42BPBQ9Y5S2 1711 aa10.2□□□□□ -0.78
TMEM106C-213ENST00000550146 ADGRL1O94910 1474 aa10.19□□□□□ -0.78
TMEM106C-213ENST00000550146 ARHGAP5Q13017 1502 aa10.18□□□□□ -0.78
TMEM106C-213ENST00000550146 SCAPERQ9BY12 1400 aa10.18□□□□□ -0.78
TMEM106C-213ENST00000550146 MTUS2Q5JR59 1369 aa10.18□□□□□ -0.78
TMEM106C-213ENST00000550146 CDC42BPAQ5VT25 1732 aa10.18□□□□□ -0.78
TMEM106C-213ENST00000550146 PREX2Q70Z35 1606 aa10.17□□□□□ -0.78
TMEM106C-213ENST00000550146 ZMYM4Q5VZL5 1548 aa10.17□□□□□ -0.78
TMEM106C-213ENST00000550146 ARID4BQ4LE39 1312 aaPredicted RBP10.15□□□□□ -0.78
TMEM106C-213ENST00000550146 VPS8Q8N3P4 1428 aa10.15□□□□□ -0.79
TMEM106C-213ENST00000550146 ARHGEF40Q8TER5 1519 aa10.14□□□□□ -0.79
TMEM106C-213ENST00000550146 MYT1LQ9UL68 1186 aa10.14□□□□□ -0.79
TMEM106C-213ENST00000550146 ZNF777Q9ULD5 760 aaPredicted RBP10.14□□□□□ -0.79
TMEM106C-213ENST00000550146 POGZQ7Z3K3 1410 aa10.14□□□□□ -0.79
TMEM106C-213ENST00000550146 CCNB3Q8WWL7 1395 aa10.14□□□□□ -0.79
TMEM106C-213ENST00000550146 MAGI2Q86UL8 1455 aa10.13□□□□□ -0.79
TMEM106C-213ENST00000550146 EHBP1L1Q8N3D4 1523 aa10.12□□□□□ -0.79
TMEM106C-213ENST00000550146 ZNF518AQ6AHZ1 1483 aa10.12□□□□□ -0.79
TMEM106C-213ENST00000550146 CFDP1Q9UEE9 299 aaPredicted RBP10.12□□□□□ -0.79
TMEM106C-213ENST00000550146 KDM5CP41229 1560 aa10.12□□□□□ -0.79
TMEM106C-213ENST00000550146 ZFYVE16Q7Z3T8 1539 aa10.12□□□□□ -0.79
TMEM106C-213ENST00000550146 GPATCH8Q9UKJ3 1502 aaKnown RBP10.12□□□□□ -0.79
TMEM106C-213ENST00000550146 ADAMTSL3P82987 1691 aa10.12□□□□□ -0.79
TMEM106C-213ENST00000550146 ITSN2Q9NZM3 1697 aa10.12□□□□□ -0.79
TMEM106C-213ENST00000550146 BCORL1Q5H9F3 1711 aa10.11□□□□□ -0.79
TMEM106C-213ENST00000550146 SIGLEC1Q9BZZ2 1709 aa10.11□□□□□ -0.79
TMEM106C-213ENST00000550146 APLP2Q06481 763 aa10.11□□□□□ -0.79
TMEM106C-213ENST00000550146 AFAP1Q8N556 730 aa10.11□□□□□ -0.79
TMEM106C-213ENST00000550146 ABCC1P33527 1531 aa10.11□□□□□ -0.79
TMEM106C-213ENST00000550146 TIAM1Q13009 1591 aa10.09□□□□□ -0.79
TMEM106C-213ENST00000550146 YEATS2Q9ULM3 1422 aa10.09□□□□□ -0.79
TMEM106C-213ENST00000550146 ARHGEF12Q9NZN5 1544 aa10.09□□□□□ -0.79
TMEM106C-213ENST00000550146 SAMD9LQ8IVG5 1584 aa10.09□□□□□ -0.79
TMEM106C-213ENST00000550146 HNRNPMP52272 730 aaKnown RBP eCLIP10.08□□□□□ -0.8
TMEM106C-213ENST00000550146 ATP10AO60312 1499 aa10.08□□□□□ -0.8
TMEM106C-213ENST00000550146 PLEKHH2Q8IVE3 1493 aa10.08□□□□□ -0.8
TMEM106C-213ENST00000550146 TRAPPC8Q9Y2L5 1435 aa10.07□□□□□ -0.8
TMEM106C-213ENST00000550146 HECW2Q9P2P5 1572 aa10.07□□□□□ -0.8
TMEM106C-213ENST00000550146 NCOA2Q15596 1464 aa10.07□□□□□ -0.8
TMEM106C-213ENST00000550146 LRRC9Q6ZRR7 1453 aa10.07□□□□□ -0.8
TMEM106C-213ENST00000550146 SUPT6HQ7KZ85 1726 aaKnown RBP10.07□□□□□ -0.8
TMEM106C-213ENST00000550146 MAP3K1Q13233 1512 aa10.07□□□□□ -0.8
TMEM106C-213ENST00000550146 KIDINS220Q9ULH0 1771 aa10.06□□□□□ -0.8
TMEM106C-213ENST00000550146 MLH3Q9UHC1 1453 aa10.06□□□□□ -0.8
TMEM106C-213ENST00000550146 C9orf84Q5VXU9 1444 aa10.06□□□□□ -0.8
TMEM106C-213ENST00000550146 KIAA1107Q9UPP5 1409 aa10.06□□□□□ -0.8
TMEM106C-213ENST00000550146 SPAG9O60271 1321 aaKnown RBP10.06□□□□□ -0.8
TMEM106C-213ENST00000550146 DIP2CQ9Y2E4 1556 aa10.05□□□□□ -0.8
TMEM106C-213ENST00000550146 ABCA6Q8N139 1617 aa10.05□□□□□ -0.8
TMEM106C-213ENST00000550146 MADDQ8WXG6 1647 aa10.05□□□□□ -0.8
TMEM106C-213ENST00000550146 MLECQ14165 292 aa10.05□□□□□ -0.8
TMEM106C-213ENST00000550146 SYCP2Q9BX26 1530 aa10.05□□□□□ -0.8
TMEM106C-213ENST00000550146 REREQ9P2R6 1566 aa10.05□□□□□ -0.8
TMEM106C-213ENST00000550146 KANK4Q5T7N3 995 aaPredicted RBP10.04□□□□□ -0.8
TMEM106C-213ENST00000550146 ZNF644Q9H582 1327 aaPredicted RBP10.04□□□□□ -0.8
TMEM106C-213ENST00000550146 RIMS1Q86UR5 1692 aaKnown RBP10.02□□□□□ -0.8
TMEM106C-213ENST00000550146 FER1L4A9Z1Z3 1794 aa10.02□□□□□ -0.81
TMEM106C-213ENST00000550146 PTPRMP28827 1452 aa10.02□□□□□ -0.81
TMEM106C-213ENST00000550146 RSPH4AQ5TD94 716 aa10.01□□□□□ -0.81
TMEM106C-213ENST00000550146 MBD5Q9P267 1494 aa10.01□□□□□ -0.81
TMEM106C-213ENST00000550146 INO80Q9ULG1 1556 aaPredicted RBP10.01□□□□□ -0.81
TMEM106C-213ENST00000550146 CAMSAP2Q08AD1 1489 aa10□□□□□ -0.81
TMEM106C-213ENST00000550146 PLPPR3Q6T4P5 718 aa10□□□□□ -0.81
TMEM106C-213ENST00000550146 ESF1Q9H501 851 aaKnown RBP10□□□□□ -0.81
TMEM106C-213ENST00000550146 AGLP35573 1532 aa10□□□□□ -0.81
TMEM106C-213ENST00000550146 SETD1BQ9UPS6 1966 aaKnown RBP9.99□□□□□ -0.81
TMEM106C-213ENST00000550146 ATP7AQ04656 1500 aa9.99□□□□□ -0.81
TMEM106C-213ENST00000550146 TSPY4P0CV99 314 aa9.99□□□□□ -0.81
TMEM106C-213ENST00000550146 TSPY10P0CW01 314 aa9.99□□□□□ -0.81
TMEM106C-213ENST00000550146 PIAS4Q8N2W9 510 aaPredicted RBP9.98□□□□□ -0.81
TMEM106C-213ENST00000550146 MYOM3Q5VTT5 1437 aa9.98□□□□□ -0.81
TMEM106C-213ENST00000550146 MIA2Q96PC5 1412 aa9.98□□□□□ -0.81
TMEM106C-213ENST00000550146 CCDC141Q6ZP82 1450 aa9.98□□□□□ -0.81
TMEM106C-213ENST00000550146 ADGBQ8N7X0 1667 aa9.97□□□□□ -0.81
TMEM106C-213ENST00000550146 RTEL1-TNFRSF6BF6WH68 1400 aa9.97□□□□□ -0.81
TMEM106C-213ENST00000550146 A2MP01023 1474 aa9.97□□□□□ -0.81
TMEM106C-213ENST00000550146 PLXNC1O60486 1568 aa9.97□□□□□ -0.81
TMEM106C-213ENST00000550146 ARHGEF5Q12774 1597 aa9.97□□□□□ -0.81
TMEM106C-213ENST00000550146 DHX29Q7Z478 1369 aaKnown RBP9.93□□□□□ -0.82
TMEM106C-213ENST00000550146 CEBPAP49715 358 aaPredicted RBP9.93□□□□□ -0.82
TMEM106C-213ENST00000550146 GGT6Q6P531 493 aa9.93□□□□□ -0.82
TMEM106C-213ENST00000550146 C3P01024 1663 aa9.93□□□□□ -0.82
TMEM106C-213ENST00000550146 CNTLNQ9NXG0 1405 aa9.92□□□□□ -0.82
TMEM106C-213ENST00000550146 MROH2AA6NES4 1674 aa9.92□□□□□ -0.82
TMEM106C-213ENST00000550146 MAST1Q9Y2H9 1570 aa9.92□□□□□ -0.82
TMEM106C-213ENST00000550146 LMTK3Q96Q04 1460 aa9.91□□□□□ -0.82
TMEM106C-213ENST00000550146 FGD6Q6ZV73 1430 aa9.91□□□□□ -0.82
TMEM106C-213ENST00000550146 KIF3BO15066 747 aa9.91□□□□□ -0.82
TMEM106C-213ENST00000550146 PPP6R1Q9UPN7 881 aa9.91□□□□□ -0.82
TMEM106C-213ENST00000550146 PREX1Q8TCU6 1659 aa9.9□□□□□ -0.82
TMEM106C-213ENST00000550146 PTPN23Q9H3S7 1636 aa9.9□□□□□ -0.82
TMEM106C-213ENST00000550146 FAM50AQ14320 339 aaKnown RBP9.89□□□□□ -0.83
TMEM106C-213ENST00000550146 TCOF1Q13428 1488 aaKnown RBP9.89□□□□□ -0.83
TMEM106C-213ENST00000550146 CROCC2H7BZ55 1655 aa9.89□□□□□ -0.83
TMEM106C-213ENST00000550146 CLTCQ00610 1675 aaKnown RBP9.88□□□□□ -0.83
TMEM106C-213ENST00000550146 ZMYM3Q14202 1370 aa9.88□□□□□ -0.83
TMEM106C-213ENST00000550146 DNMT1P26358 1616 aaKnown RBP9.87□□□□□ -0.83
TMEM106C-213ENST00000550146 HSPA2P54652 639 aa9.87□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms