RNA–Protein interactions for RNA: ENST00000550141.1

ITGA5-206, Transcript of integrin subunit alpha 5, humanhuman

TSL 3

Gene ITGA5, Length 582 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGA5-206ENST00000550141 CCDC18Q5T9S5 1454 aa20.48■□□□□ 0.87
ITGA5-206ENST00000550141 BCORL1Q5H9F3 1711 aa20.47■□□□□ 0.87
ITGA5-206ENST00000550141 POGZQ7Z3K3 1410 aa20.46■□□□□ 0.87
ITGA5-206ENST00000550141 MAGI2Q86UL8 1455 aa20.46■□□□□ 0.87
ITGA5-206ENST00000550141 ZFYVE16Q7Z3T8 1539 aa20.46■□□□□ 0.87
ITGA5-206ENST00000550141 PTPRMP28827 1452 aa20.45■□□□□ 0.86
ITGA5-206ENST00000550141 YEATS2Q9ULM3 1422 aa20.44■□□□□ 0.86
ITGA5-206ENST00000550141 FYCO1Q9BQS8 1478 aa20.43■□□□□ 0.86
ITGA5-206ENST00000550141 ARHGAP5Q13017 1502 aa20.43■□□□□ 0.86
ITGA5-206ENST00000550141 MADDQ8WXG6 1647 aa20.42■□□□□ 0.86
ITGA5-206ENST00000550141 CDC42BPBQ9Y5S2 1711 aa20.38■□□□□ 0.85
ITGA5-206ENST00000550141 ZNF518AQ6AHZ1 1483 aa20.37■□□□□ 0.85
ITGA5-206ENST00000550141 SIGLEC1Q9BZZ2 1709 aa20.36■□□□□ 0.85
ITGA5-206ENST00000550141 AFAP1Q8N556 730 aa20.36■□□□□ 0.85
ITGA5-206ENST00000550141 ATP10AO60312 1499 aa20.36■□□□□ 0.85
ITGA5-206ENST00000550141 RIMS1Q86UR5 1692 aaKnown RBP20.35■□□□□ 0.85
ITGA5-206ENST00000550141 PREX2Q70Z35 1606 aa20.35■□□□□ 0.85
ITGA5-206ENST00000550141 MLECQ14165 292 aa20.34■□□□□ 0.85
ITGA5-206ENST00000550141 MYT1LQ9UL68 1186 aa20.33■□□□□ 0.85
ITGA5-206ENST00000550141 C9orf84Q5VXU9 1444 aa20.32■□□□□ 0.84
ITGA5-206ENST00000550141 KDM5CP41229 1560 aa20.32■□□□□ 0.84
ITGA5-206ENST00000550141 CDC42BPAQ5VT25 1732 aa20.31■□□□□ 0.84
ITGA5-206ENST00000550141 ABCC1P33527 1531 aa20.28■□□□□ 0.84
ITGA5-206ENST00000550141 PLPPR3Q6T4P5 718 aa20.28■□□□□ 0.84
ITGA5-206ENST00000550141 TRAPPC8Q9Y2L5 1435 aa20.27■□□□□ 0.84
ITGA5-206ENST00000550141 ARHGEF12Q9NZN5 1544 aa20.27■□□□□ 0.84
ITGA5-206ENST00000550141 FER1L4A9Z1Z3 1794 aa20.27■□□□□ 0.84
ITGA5-206ENST00000550141 ZNF777Q9ULD5 760 aaPredicted RBP20.27■□□□□ 0.84
ITGA5-206ENST00000550141 CEP162Q5TB80 1403 aa20.27■□□□□ 0.83
ITGA5-206ENST00000550141 MLH3Q9UHC1 1453 aa20.26■□□□□ 0.83
ITGA5-206ENST00000550141 ITSN2Q9NZM3 1697 aa20.26■□□□□ 0.83
ITGA5-206ENST00000550141 MTUS2Q5JR59 1369 aa20.25■□□□□ 0.83
ITGA5-206ENST00000550141 GPATCH8Q9UKJ3 1502 aaKnown RBP20.25■□□□□ 0.83
ITGA5-206ENST00000550141 DIP2CQ9Y2E4 1556 aa20.24■□□□□ 0.83
ITGA5-206ENST00000550141 LMTK3Q96Q04 1460 aa20.23■□□□□ 0.83
ITGA5-206ENST00000550141 CCNB3Q8WWL7 1395 aa20.21■□□□□ 0.83
ITGA5-206ENST00000550141 ABCA6Q8N139 1617 aa20.21■□□□□ 0.83
ITGA5-206ENST00000550141 CFDP1Q9UEE9 299 aaPredicted RBP20.21■□□□□ 0.83
ITGA5-206ENST00000550141 SAMD9LQ8IVG5 1584 aa20.21■□□□□ 0.83
ITGA5-206ENST00000550141 ILDR1Q86SU0 546 aaPredicted RBP20.2■□□□□ 0.82
ITGA5-206ENST00000550141 REREQ9P2R6 1566 aa20.2■□□□□ 0.82
ITGA5-206ENST00000550141 HNRNPMP52272 730 aaKnown RBP eCLIP20.19■□□□□ 0.82
ITGA5-206ENST00000550141 KIDINS220Q9ULH0 1771 aa20.18■□□□□ 0.82
ITGA5-206ENST00000550141 SYCP2Q9BX26 1530 aa20.17■□□□□ 0.82
ITGA5-206ENST00000550141 LOC105371045A0A1W2PR82 267 aa20.16■□□□□ 0.82
ITGA5-206ENST00000550141 SPAG9O60271 1321 aaKnown RBP20.16■□□□□ 0.82
ITGA5-206ENST00000550141 PLEKHH2Q8IVE3 1493 aa20.16■□□□□ 0.82
ITGA5-206ENST00000550141 EHBP1L1Q8N3D4 1523 aa20.16■□□□□ 0.82
ITGA5-206ENST00000550141 CEBPAP49715 358 aaPredicted RBP20.15■□□□□ 0.82
ITGA5-206ENST00000550141 HSPA2P54652 639 aa20.15■□□□□ 0.82
ITGA5-206ENST00000550141 KIAA1107Q9UPP5 1409 aa20.15■□□□□ 0.82
ITGA5-206ENST00000550141 AGLP35573 1532 aa20.15■□□□□ 0.82
ITGA5-206ENST00000550141 ESF1Q9H501 851 aaKnown RBP20.12■□□□□ 0.81
ITGA5-206ENST00000550141 TIAM1Q13009 1591 aa20.12■□□□□ 0.81
ITGA5-206ENST00000550141 SETD1BQ9UPS6 1966 aaKnown RBP20.1■□□□□ 0.81
ITGA5-206ENST00000550141 ZNF644Q9H582 1327 aaPredicted RBP20.08■□□□□ 0.81
ITGA5-206ENST00000550141 ATP7AQ04656 1500 aa20.08■□□□□ 0.81
ITGA5-206ENST00000550141 PREX1Q8TCU6 1659 aa20.08■□□□□ 0.81
ITGA5-206ENST00000550141 SUPT6HQ7KZ85 1726 aaKnown RBP20.05■□□□□ 0.8
ITGA5-206ENST00000550141 INO80Q9ULG1 1556 aaPredicted RBP20.05■□□□□ 0.8
ITGA5-206ENST00000550141 VPS8Q8N3P4 1428 aa20.05■□□□□ 0.8
ITGA5-206ENST00000550141 NCOA2Q15596 1464 aa20.05■□□□□ 0.8
ITGA5-206ENST00000550141 C3P01024 1663 aa20.04■□□□□ 0.8
ITGA5-206ENST00000550141 CNTLNQ9NXG0 1405 aa20.03■□□□□ 0.8
ITGA5-206ENST00000550141 MBD5Q9P267 1494 aa20.03■□□□□ 0.8
ITGA5-206ENST00000550141 UHRF1BP1Q6BDS2 1440 aa20.02■□□□□ 0.8
ITGA5-206ENST00000550141 A2MP01023 1474 aa20.02■□□□□ 0.8
ITGA5-206ENST00000550141 PLXNC1O60486 1568 aa20■□□□□ 0.79
ITGA5-206ENST00000550141 ADGBQ8N7X0 1667 aa19.98■□□□□ 0.79
ITGA5-206ENST00000550141 FBXO41Q8TF61 875 aa19.98■□□□□ 0.79
ITGA5-206ENST00000550141 RTEL1-TNFRSF6BF6WH68 1400 aa19.98■□□□□ 0.79
ITGA5-206ENST00000550141 LRRC9Q6ZRR7 1453 aa19.98■□□□□ 0.79
ITGA5-206ENST00000550141 CAMSAP2Q08AD1 1489 aa19.97■□□□□ 0.79
ITGA5-206ENST00000550141 RSPH4AQ5TD94 716 aa19.96■□□□□ 0.79
ITGA5-206ENST00000550141 GGT6Q6P531 493 aa19.96■□□□□ 0.79
ITGA5-206ENST00000550141 MROH2AA6NES4 1674 aa19.96■□□□□ 0.79
ITGA5-206ENST00000550141 ZMYM3Q14202 1370 aa19.95■□□□□ 0.79
ITGA5-206ENST00000550141 CCDC141Q6ZP82 1450 aa19.95■□□□□ 0.78
ITGA5-206ENST00000550141 DMRT2Q9Y5R5 561 aa19.93■□□□□ 0.78
ITGA5-206ENST00000550141 MAP3K1Q13233 1512 aa19.92■□□□□ 0.78
ITGA5-206ENST00000550141 CLTCQ00610 1675 aaKnown RBP19.92■□□□□ 0.78
ITGA5-206ENST00000550141 KANK4Q5T7N3 995 aaPredicted RBP19.92■□□□□ 0.78
ITGA5-206ENST00000550141 PPP6R1Q9UPN7 881 aa19.92■□□□□ 0.78
ITGA5-206ENST00000550141 DHX29Q7Z478 1369 aaKnown RBP19.92■□□□□ 0.78
ITGA5-206ENST00000550141 NPATQ14207 1427 aa19.92■□□□□ 0.78
ITGA5-206ENST00000550141 STRCQ7RTU9 1775 aa19.91■□□□□ 0.78
ITGA5-206ENST00000550141 TSPY4P0CV99 314 aa19.89■□□□□ 0.77
ITGA5-206ENST00000550141 TSPY10P0CW01 314 aa19.89■□□□□ 0.77
ITGA5-206ENST00000550141 ARHGEF5Q12774 1597 aa19.88■□□□□ 0.77
ITGA5-206ENST00000550141 KIF3BO15066 747 aa19.86■□□□□ 0.77
ITGA5-206ENST00000550141 APLP2Q06481 763 aa19.86■□□□□ 0.77
ITGA5-206ENST00000550141 CERKQ8TCT0 537 aa19.86■□□□□ 0.77
ITGA5-206ENST00000550141 PTPRKQ15262 1439 aa19.85■□□□□ 0.77
ITGA5-206ENST00000550141 MYOM3Q5VTT5 1437 aa19.84■□□□□ 0.77
ITGA5-206ENST00000550141 MIA2Q96PC5 1412 aa19.83■□□□□ 0.76
ITGA5-206ENST00000550141 PTPRTO14522 1441 aa19.82■□□□□ 0.76
ITGA5-206ENST00000550141 NCOA1Q15788 1441 aa19.81■□□□□ 0.76
ITGA5-206ENST00000550141 CAMSAP1Q5T5Y3 1602 aa19.8■□□□□ 0.76
ITGA5-206ENST00000550141 MYO3AQ8NEV4 1616 aa19.79■□□□□ 0.76
ITGA5-206ENST00000550141 WASHC2CQ9Y4E1 1318 aa19.78■□□□□ 0.76
Retrieved 100 of 20,778 RNA–protein pairs in 12.3 ms