RNA–Protein interactions for RNA: ENST00000550013.1

RAB5C-205, Transcript of RAB5C, member RAS oncogene family, humanhuman

TSL 2

Gene RAB5C, Length 555 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB5C-205ENST00000550013 POGZQ7Z3K3 1410 aa25.53■■□□□ 1.68
RAB5C-205ENST00000550013 LMTK3Q96Q04 1460 aa25.53■■□□□ 1.68
RAB5C-205ENST00000550013 MYO5CQ9NQX4 1742 aa25.52■■□□□ 1.68
RAB5C-205ENST00000550013 MAGI2Q86UL8 1455 aa25.52■■□□□ 1.68
RAB5C-205ENST00000550013 KIF14Q15058 1648 aa25.52■■□□□ 1.68
RAB5C-205ENST00000550013 LRRIQ1Q96JM4 1722 aa25.48■■□□□ 1.67
RAB5C-205ENST00000550013 PLPPR3Q6T4P5 718 aa25.47■■□□□ 1.67
RAB5C-205ENST00000550013 MLECQ14165 292 aa25.45■■□□□ 1.66
RAB5C-205ENST00000550013 EFCAB2Q5VUJ9 269 aa25.45■■□□□ 1.66
RAB5C-205ENST00000550013 CDK11AQ9UQ88 783 aaPredicted RBP25.45■■□□□ 1.66
RAB5C-205ENST00000550013 FER1L4A9Z1Z3 1794 aa25.44■■□□□ 1.66
RAB5C-205ENST00000550013 TROQ12816 1431 aaPredicted RBP25.44■■□□□ 1.66
RAB5C-205ENST00000550013 ATP10AO60312 1499 aa25.4■■□□□ 1.66
RAB5C-205ENST00000550013 ARHGAP5Q13017 1502 aa25.39■■□□□ 1.66
RAB5C-205ENST00000550013 HSPA2P54652 639 aa25.39■■□□□ 1.66
RAB5C-205ENST00000550013 FBXO41Q8TF61 875 aa25.39■■□□□ 1.66
RAB5C-205ENST00000550013 CLIP1P30622 1438 aa25.37■■□□□ 1.65
RAB5C-205ENST00000550013 C9orf84Q5VXU9 1444 aa25.37■■□□□ 1.65
RAB5C-205ENST00000550013 ARHGEF12Q9NZN5 1544 aa25.36■■□□□ 1.65
RAB5C-205ENST00000550013 ZNF518AQ6AHZ1 1483 aa25.35■■□□□ 1.65
RAB5C-205ENST00000550013 CDC42BPBQ9Y5S2 1711 aa25.34■■□□□ 1.65
RAB5C-205ENST00000550013 KDM5CP41229 1560 aa25.34■■□□□ 1.65
RAB5C-205ENST00000550013 AFAP1Q8N556 730 aa25.33■■□□□ 1.65
RAB5C-205ENST00000550013 CASKIN1Q8WXD9 1431 aa25.29■■□□□ 1.64
RAB5C-205ENST00000550013 DIP2CQ9Y2E4 1556 aa25.28■■□□□ 1.64
RAB5C-205ENST00000550013 PREX2Q70Z35 1606 aa25.28■■□□□ 1.64
RAB5C-205ENST00000550013 CCDC18Q5T9S5 1454 aa25.28■■□□□ 1.64
RAB5C-205ENST00000550013 MYT1LQ9UL68 1186 aa25.26■■□□□ 1.63
RAB5C-205ENST00000550013 ABCA6Q8N139 1617 aa25.26■■□□□ 1.63
RAB5C-205ENST00000550013 CEBPAP49715 358 aaPredicted RBP25.25■■□□□ 1.63
RAB5C-205ENST00000550013 PREX1Q8TCU6 1659 aa25.24■■□□□ 1.63
RAB5C-205ENST00000550013 ABCC1P33527 1531 aa25.24■■□□□ 1.63
RAB5C-205ENST00000550013 ITSN2Q9NZM3 1697 aa25.23■■□□□ 1.63
RAB5C-205ENST00000550013 TRAPPC8Q9Y2L5 1435 aa25.22■■□□□ 1.63
RAB5C-205ENST00000550013 CDC42BPAQ5VT25 1732 aa25.22■■□□□ 1.63
RAB5C-205ENST00000550013 MLH3Q9UHC1 1453 aa25.21■■□□□ 1.63
RAB5C-205ENST00000550013 REREQ9P2R6 1566 aa25.21■■□□□ 1.63
RAB5C-205ENST00000550013 FYCO1Q9BQS8 1478 aa25.19■■□□□ 1.62
RAB5C-205ENST00000550013 KIDINS220Q9ULH0 1771 aa25.16■■□□□ 1.62
RAB5C-205ENST00000550013 AGLP35573 1532 aa25.13■■□□□ 1.61
RAB5C-205ENST00000550013 C3P01024 1663 aa25.13■■□□□ 1.61
RAB5C-205ENST00000550013 SETD1BQ9UPS6 1966 aaKnown RBP25.13■■□□□ 1.61
RAB5C-205ENST00000550013 SAMD9LQ8IVG5 1584 aa25.11■■□□□ 1.61
RAB5C-205ENST00000550013 STRCQ7RTU9 1775 aa25.1■■□□□ 1.61
RAB5C-205ENST00000550013 CERKQ8TCT0 537 aa25.1■■□□□ 1.61
RAB5C-205ENST00000550013 UHRF1BP1Q6BDS2 1440 aa25.1■■□□□ 1.61
RAB5C-205ENST00000550013 ZNF777Q9ULD5 760 aaPredicted RBP25.09■■□□□ 1.61
RAB5C-205ENST00000550013 SYCP2Q9BX26 1530 aa25.07■■□□□ 1.6
RAB5C-205ENST00000550013 GPATCH8Q9UKJ3 1502 aaKnown RBP25.07■■□□□ 1.6
RAB5C-205ENST00000550013 ESF1Q9H501 851 aaKnown RBP25.04■■□□□ 1.6
RAB5C-205ENST00000550013 HNRNPMP52272 730 aaKnown RBP eCLIP25.03■■□□□ 1.6
RAB5C-205ENST00000550013 SPAG9O60271 1321 aaKnown RBP25■■□□□ 1.59
RAB5C-205ENST00000550013 SUPT6HQ7KZ85 1726 aaKnown RBP25■■□□□ 1.59
RAB5C-205ENST00000550013 CNTLNQ9NXG0 1405 aa24.98■■□□□ 1.59
RAB5C-205ENST00000550013 DMRT2Q9Y5R5 561 aa24.98■■□□□ 1.59
RAB5C-205ENST00000550013 ATP7AQ04656 1500 aa24.97■■□□□ 1.59
RAB5C-205ENST00000550013 CCNB3Q8WWL7 1395 aa24.97■■□□□ 1.59
RAB5C-205ENST00000550013 CFDP1Q9UEE9 299 aaPredicted RBP24.97■■□□□ 1.59
RAB5C-205ENST00000550013 INO80Q9ULG1 1556 aaPredicted RBP24.96■■□□□ 1.59
RAB5C-205ENST00000550013 KIAA1107Q9UPP5 1409 aa24.95■■□□□ 1.59
RAB5C-205ENST00000550013 MTUS2Q5JR59 1369 aa24.95■■□□□ 1.59
RAB5C-205ENST00000550013 PLEKHH2Q8IVE3 1493 aa24.95■■□□□ 1.58
RAB5C-205ENST00000550013 MROH2AA6NES4 1674 aa24.94■■□□□ 1.58
RAB5C-205ENST00000550013 PLXNC1O60486 1568 aa24.92■■□□□ 1.58
RAB5C-205ENST00000550013 PTPRTO14522 1441 aa24.91■■□□□ 1.58
RAB5C-205ENST00000550013 TIAM1Q13009 1591 aa24.9■■□□□ 1.58
RAB5C-205ENST00000550013 CLTCQ00610 1675 aaKnown RBP24.9■■□□□ 1.58
RAB5C-205ENST00000550013 A2MP01023 1474 aa24.89■■□□□ 1.58
RAB5C-205ENST00000550013 ZMYM3Q14202 1370 aa24.89■■□□□ 1.57
RAB5C-205ENST00000550013 NPATQ14207 1427 aa24.88■■□□□ 1.57
RAB5C-205ENST00000550013 ZNF644Q9H582 1327 aaPredicted RBP24.87■■□□□ 1.57
RAB5C-205ENST00000550013 NCOA1Q15788 1441 aa24.87■■□□□ 1.57
RAB5C-205ENST00000550013 EHBP1L1Q8N3D4 1523 aa24.87■■□□□ 1.57
RAB5C-205ENST00000550013 ADGBQ8N7X0 1667 aa24.85■■□□□ 1.57
RAB5C-205ENST00000550013 CAMSAP1Q5T5Y3 1602 aa24.84■■□□□ 1.57
RAB5C-205ENST00000550013 CEP162Q5TB80 1403 aa24.82■■□□□ 1.56
RAB5C-205ENST00000550013 GGT6Q6P531 493 aa24.82■■□□□ 1.56
RAB5C-205ENST00000550013 MBD5Q9P267 1494 aa24.82■■□□□ 1.56
RAB5C-205ENST00000550013 LTBP4Q8N2S1 1624 aa24.81■■□□□ 1.56
RAB5C-205ENST00000550013 MYO3AQ8NEV4 1616 aa24.8■■□□□ 1.56
RAB5C-205ENST00000550013 PTPRKQ15262 1439 aa24.78■■□□□ 1.56
RAB5C-205ENST00000550013 ZNF142P52746 1687 aaPredicted RBP24.78■■□□□ 1.56
RAB5C-205ENST00000550013 NCKAP5LQ9HCH0 1330 aa24.75■■□□□ 1.55
RAB5C-205ENST00000550013 CEP170BQ9Y4F5 1589 aaPredicted RBP24.74■■□□□ 1.55
RAB5C-205ENST00000550013 RTEL1-TNFRSF6BF6WH68 1400 aa24.73■■□□□ 1.55
RAB5C-205ENST00000550013 NCOA2Q15596 1464 aa24.72■■□□□ 1.55
RAB5C-205ENST00000550013 PPP6R1Q9UPN7 881 aa24.71■■□□□ 1.55
RAB5C-205ENST00000550013 CAMSAP2Q08AD1 1489 aa24.7■■□□□ 1.55
RAB5C-205ENST00000550013 DHX29Q7Z478 1369 aaKnown RBP24.7■■□□□ 1.55
RAB5C-205ENST00000550013 CCDC141Q6ZP82 1450 aa24.7■■□□□ 1.54
RAB5C-205ENST00000550013 PLA2R1Q13018 1463 aa24.69■■□□□ 1.54
RAB5C-205ENST00000550013 IQSEC2Q5JU85 1478 aa24.68■■□□□ 1.54
RAB5C-205ENST00000550013 TCOF1Q13428 1488 aaKnown RBP24.67■■□□□ 1.54
RAB5C-205ENST00000550013 ZNF335Q9H4Z2 1342 aaPredicted RBP24.66■■□□□ 1.54
RAB5C-205ENST00000550013 KIF3BO15066 747 aa24.65■■□□□ 1.54
RAB5C-205ENST00000550013 PKD2Q13563 968 aa24.65■■□□□ 1.54
RAB5C-205ENST00000550013 A2ML1A8K2U0 1454 aa24.64■■□□□ 1.53
RAB5C-205ENST00000550013 DNMT1P26358 1616 aaKnown RBP24.63■■□□□ 1.53
RAB5C-205ENST00000550013 DISP3Q9P2K9 1392 aa24.63■■□□□ 1.53
RAB5C-205ENST00000550013 KDM5DQ9BY66 1539 aa24.61■■□□□ 1.53
Retrieved 100 of 20,778 RNA–protein pairs in 11.4 ms