RNA–Protein interactions for RNA: ENST00000549757.5

SMARCC2-207, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin subfamily c member 2, humanhuman

TSL 5

Gene SMARCC2, Length 1,062 nt, Biotype retained intron, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCC2-207ENST00000549757 TMEM121BQ9BXQ6 578 aaPredicted RBP10.3□□□□□ -0.76
SMARCC2-207ENST00000549757 BOLA1Q9Y3E2 137 aa10.3□□□□□ -0.76
SMARCC2-207ENST00000549757 PRKCSHP14314 528 aaPredicted RBP10.29□□□□□ -0.76
SMARCC2-207ENST00000549757 MICALL2Q8IY33 904 aa10.26□□□□□ -0.77
SMARCC2-207ENST00000549757 PPP1R37O75864 691 aa10.25□□□□□ -0.77
SMARCC2-207ENST00000549757 GTPBP6O43824 516 aaPredicted RBP10.22□□□□□ -0.77
SMARCC2-207ENST00000549757 EIF2AK3Q9NZJ5 1116 aaKnown RBP10.22□□□□□ -0.77
SMARCC2-207ENST00000549757 C3orf67Q6ZVT6 689 aa10.21□□□□□ -0.77
SMARCC2-207ENST00000549757 BBXQ8WY36 941 aaPredicted RBP10.21□□□□□ -0.77
SMARCC2-207ENST00000549757 G3V3G9 751 aa10.2□□□□□ -0.78
SMARCC2-207ENST00000549757 SLAIN1Q8ND83 568 aa10.2□□□□□ -0.78
SMARCC2-207ENST00000549757 TMEM92Q6UXU6 159 aa10.17□□□□□ -0.78
SMARCC2-207ENST00000549757 RYDENQ9NUL5 291 aaKnown RBP10.17□□□□□ -0.78
SMARCC2-207ENST00000549757 BCANQ96GW7 911 aa10.16□□□□□ -0.78
SMARCC2-207ENST00000549757 PLCB2Q00722 1185 aa10.14□□□□□ -0.79
SMARCC2-207ENST00000549757 KIF3CO14782 793 aa10.1□□□□□ -0.79
SMARCC2-207ENST00000549757 ZBTB4Q9P1Z0 1013 aaPredicted RBP10.08□□□□□ -0.8
SMARCC2-207ENST00000549757 LCE2DQ5TA82 110 aaPredicted RBP10.07□□□□□ -0.8
SMARCC2-207ENST00000549757 SPRYD3Q8NCJ5 442 aa10.06□□□□□ -0.8
SMARCC2-207ENST00000549757 C2orf72A6NCS6 295 aa10.05□□□□□ -0.8
SMARCC2-207ENST00000549757 ARXQ96QS3 562 aa10.05□□□□□ -0.8
SMARCC2-207ENST00000549757 HOXB3P14651 431 aaPredicted RBP10.04□□□□□ -0.8
SMARCC2-207ENST00000549757 PAXIP1Q6ZW49 1069 aaPredicted RBP10.02□□□□□ -0.81
SMARCC2-207ENST00000549757 SNPHO15079 494 aa10.01□□□□□ -0.81
SMARCC2-207ENST00000549757 GPHNQ9NQX3 736 aaPredicted RBP10.01□□□□□ -0.81
SMARCC2-207ENST00000549757 CADPS2Q86UW7 1296 aa10□□□□□ -0.81
SMARCC2-207ENST00000549757 FAM163AQ96GL9 167 aaPredicted RBP10□□□□□ -0.81
SMARCC2-207ENST00000549757 CFAP44Q96MT7 982 aa10□□□□□ -0.81
SMARCC2-207ENST00000549757 CRISPLD2Q9H0B8 497 aa10□□□□□ -0.81
SMARCC2-207ENST00000549757 NCKAP5LQ9HCH0 1330 aa10□□□□□ -0.81
SMARCC2-207ENST00000549757 ST18O60284 1047 aa9.99□□□□□ -0.81
SMARCC2-207ENST00000549757 TMC2Q8TDI7 906 aa9.99□□□□□ -0.81
SMARCC2-207ENST00000549757 TIMELESSQ9UNS1 1208 aa9.99□□□□□ -0.81
SMARCC2-207ENST00000549757 ERCC6Q03468 1493 aa9.98□□□□□ -0.81
SMARCC2-207ENST00000549757 FOXK1P85037 733 aa9.97□□□□□ -0.81
SMARCC2-207ENST00000549757 TPRNQ4KMQ1 711 aa9.96□□□□□ -0.82
SMARCC2-207ENST00000549757 CUX2O14529 1486 aa9.96□□□□□ -0.82
SMARCC2-207ENST00000549757 HAP1P54257 671 aaPredicted RBP9.95□□□□□ -0.82
SMARCC2-207ENST00000549757 DSG2Q14126 1118 aa9.95□□□□□ -0.82
SMARCC2-207ENST00000549757 DOK7Q18PE1 504 aa9.94□□□□□ -0.82
SMARCC2-207ENST00000549757 PDE4AP27815 886 aa9.93□□□□□ -0.82
SMARCC2-207ENST00000549757 NCAPD3P42695 1498 aa9.92□□□□□ -0.82
SMARCC2-207ENST00000549757 MFSD10Q14728 455 aa9.92□□□□□ -0.82
SMARCC2-207ENST00000549757 PLPP6Q8IY26 295 aa9.91□□□□□ -0.82
SMARCC2-207ENST00000549757 SLC34A2O95436 690 aa9.9□□□□□ -0.82
SMARCC2-207ENST00000549757 SMARCA2P51531 1590 aa9.89□□□□□ -0.83
SMARCC2-207ENST00000549757 PPP1R15BQ5SWA1 713 aa9.89□□□□□ -0.83
SMARCC2-207ENST00000549757 GPR153Q6NV75 609 aa9.89□□□□□ -0.83
SMARCC2-207ENST00000549757 LARP6Q9BRS8 491 aaKnown RBP9.89□□□□□ -0.83
SMARCC2-207ENST00000549757 ZSWIM6Q9HCJ5 1215 aa9.89□□□□□ -0.83
SMARCC2-207ENST00000549757 ATAD2BQ9ULI0 1458 aa9.89□□□□□ -0.83
SMARCC2-207ENST00000549757 HOXB1P14653 301 aaPredicted RBP9.88□□□□□ -0.83
SMARCC2-207ENST00000549757 ZNF710Q8N1W2 664 aa9.88□□□□□ -0.83
SMARCC2-207ENST00000549757 SMARCA4P51532 1647 aa9.88□□□□□ -0.83
SMARCC2-207ENST00000549757 HMGXB3Q12766 1538 aa9.87□□□□□ -0.83
SMARCC2-207ENST00000549757 POTEMA6NI47 508 aa9.87□□□□□ -0.83
SMARCC2-207ENST00000549757 RIMBP2O15034 1052 aa9.87□□□□□ -0.83
SMARCC2-207ENST00000549757 POTEGQ6S5H5 508 aa9.87□□□□□ -0.83
SMARCC2-207ENST00000549757 VSIG10Q8N0Z9 540 aa9.86□□□□□ -0.83
SMARCC2-207ENST00000549757 DDX27Q96GQ7 796 aaKnown RBP9.86□□□□□ -0.83
SMARCC2-207ENST00000549757 TULP1O00294 542 aaPredicted RBP9.85□□□□□ -0.83
SMARCC2-207ENST00000549757 MARVELD3Q96A59 401 aa9.85□□□□□ -0.83
SMARCC2-207ENST00000549757 TSHZ2Q9NRE2 1034 aa9.85□□□□□ -0.83
SMARCC2-207ENST00000549757 PTCD2Q8WV60 388 aaKnown RBP9.84□□□□□ -0.83
SMARCC2-207ENST00000549757 NESP48681 1621 aa9.84□□□□□ -0.83
SMARCC2-207ENST00000549757 BAZ1BQ9UIG0 1483 aaKnown RBP9.84□□□□□ -0.83
SMARCC2-207ENST00000549757 ARSIQ5FYB1 569 aa9.83□□□□□ -0.84
SMARCC2-207ENST00000549757 KHSRPQ92945 711 aaKnown RBP eCLIP9.83□□□□□ -0.84
SMARCC2-207ENST00000549757 PCDHGA4Q9Y5G9 962 aa9.83□□□□□ -0.84
SMARCC2-207ENST00000549757 BAZ1AQ9NRL2 1556 aaPredicted RBP9.82□□□□□ -0.84
SMARCC2-207ENST00000549757 OXER1Q8TDS5 423 aa9.81□□□□□ -0.84
SMARCC2-207ENST00000549757 KDM4FA0A1W2PPD8 638 aa9.8□□□□□ -0.84
SMARCC2-207ENST00000549757 EMP3P54852 163 aa9.8□□□□□ -0.84
SMARCC2-207ENST00000549757 POTEB3A0JP26 581 aa9.79□□□□□ -0.84
SMARCC2-207ENST00000549757 CAMK2BQ13554 666 aa9.79□□□□□ -0.84
SMARCC2-207ENST00000549757 POTEBQ6S5H4 581 aa9.79□□□□□ -0.84
SMARCC2-207ENST00000549757 EMILIN3Q9NT22 766 aa9.78□□□□□ -0.84
SMARCC2-207ENST00000549757 THOC2Q8NI27 1593 aaKnown RBP9.76□□□□□ -0.85
SMARCC2-207ENST00000549757 LAMC3Q9Y6N6 1575 aa9.76□□□□□ -0.85
SMARCC2-207ENST00000549757 NUDT7P0C024 238 aa9.76□□□□□ -0.85
SMARCC2-207ENST00000549757 FAM205CA6NFA0 338 aa9.75□□□□□ -0.85
SMARCC2-207ENST00000549757 UPF1Q92900 1129 aaKnown RBP eCLIP9.75□□□□□ -0.85
SMARCC2-207ENST00000549757 HS3ST6Q96QI5 342 aa9.75□□□□□ -0.85
SMARCC2-207ENST00000549757 PEG3Q9GZU2 1588 aa9.75□□□□□ -0.85
SMARCC2-207ENST00000549757 HOMEZQ8IX15 550 aa9.74□□□□□ -0.85
SMARCC2-207ENST00000549757 KIF21AQ7Z4S6 1674 aa9.72□□□□□ -0.85
SMARCC2-207ENST00000549757 ZNF316A6NFI3 1004 aaPredicted RBP9.72□□□□□ -0.85
SMARCC2-207ENST00000549757 TBC1D12O60347 775 aa9.72□□□□□ -0.85
SMARCC2-207ENST00000549757 ERBB3P21860 1342 aa9.72□□□□□ -0.85
SMARCC2-207ENST00000549757 PDS5BQ9NTI5 1447 aa9.72□□□□□ -0.85
SMARCC2-207ENST00000549757 MROH2BQ7Z745 1585 aa9.71□□□□□ -0.85
SMARCC2-207ENST00000549757 ERICH6Q7L0X2 663 aa9.71□□□□□ -0.86
SMARCC2-207ENST00000549757 LHX6Q9UPM6 363 aa9.71□□□□□ -0.86
SMARCC2-207ENST00000549757 VARS2Q5ST30 1063 aaKnown RBP9.7□□□□□ -0.86
SMARCC2-207ENST00000549757 CDAN1Q8IWY9 1227 aa9.7□□□□□ -0.86
SMARCC2-207ENST00000549757 GTF3C3Q9Y5Q9 886 aa9.7□□□□□ -0.86
SMARCC2-207ENST00000549757 E2F4Q16254 413 aa9.69□□□□□ -0.86
SMARCC2-207ENST00000549757 WDR70Q9NW82 654 aa9.69□□□□□ -0.86
SMARCC2-207ENST00000549757 ANO8Q9HCE9 1232 aaPredicted RBP9.68□□□□□ -0.86
SMARCC2-207ENST00000549757 PCDH10Q9P2E7 1040 aa9.68□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 51.5 ms