RNA–Protein interactions for RNA: ENST00000549752.1

CCDC38-207, Transcript of coiled-coil domain containing 38, humanhuman

TSL 3

Gene CCDC38, Length 476 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC38-207ENST00000549752 CASKIN1Q8WXD9 1431 aa16.88■□□□□ 0.29
CCDC38-207ENST00000549752 CNKSR2Q8WXI2 1034 aa16.87■□□□□ 0.29
CCDC38-207ENST00000549752 AKNAQ7Z591 1439 aa16.87■□□□□ 0.29
CCDC38-207ENST00000549752 FYCO1Q9BQS8 1478 aa16.86■□□□□ 0.29
CCDC38-207ENST00000549752 TROQ12816 1431 aaPredicted RBP16.86■□□□□ 0.29
CCDC38-207ENST00000549752 DENND4BO75064 1496 aaPredicted RBP16.86■□□□□ 0.29
CCDC38-207ENST00000549752 FRMPD1Q5SYB0 1578 aa16.85■□□□□ 0.29
CCDC38-207ENST00000549752 MSH5O43196 834 aa16.84■□□□□ 0.29
CCDC38-207ENST00000549752 PLCH2O75038 1416 aa16.84■□□□□ 0.29
CCDC38-207ENST00000549752 RAPGEF3O95398 923 aa16.82■□□□□ 0.28
CCDC38-207ENST00000549752 ZMYM4Q5VZL5 1548 aa16.8■□□□□ 0.28
CCDC38-207ENST00000549752 CDC42BPBQ9Y5S2 1711 aa16.8■□□□□ 0.28
CCDC38-207ENST00000549752 ARHGEF40Q8TER5 1519 aa16.8■□□□□ 0.28
CCDC38-207ENST00000549752 EFCAB2Q5VUJ9 269 aa16.79■□□□□ 0.28
CCDC38-207ENST00000549752 PREX2Q70Z35 1606 aa16.78■□□□□ 0.28
CCDC38-207ENST00000549752 ARHGAP5Q13017 1502 aa16.78■□□□□ 0.28
CCDC38-207ENST00000549752 MAGI2Q86UL8 1455 aa16.78■□□□□ 0.28
CCDC38-207ENST00000549752 BCORL1Q5H9F3 1711 aa16.76■□□□□ 0.27
CCDC38-207ENST00000549752 CDC42BPAQ5VT25 1732 aa16.76■□□□□ 0.27
CCDC38-207ENST00000549752 SCAPERQ9BY12 1400 aa16.75■□□□□ 0.27
CCDC38-207ENST00000549752 ZFYVE16Q7Z3T8 1539 aa16.75■□□□□ 0.27
CCDC38-207ENST00000549752 ADAMTSL3P82987 1691 aa16.75■□□□□ 0.27
CCDC38-207ENST00000549752 POGZQ7Z3K3 1410 aa16.73■□□□□ 0.27
CCDC38-207ENST00000549752 CEP162Q5TB80 1403 aa16.72■□□□□ 0.27
CCDC38-207ENST00000549752 ZNF518AQ6AHZ1 1483 aa16.72■□□□□ 0.27
CCDC38-207ENST00000549752 ARID4BQ4LE39 1312 aaPredicted RBP16.71■□□□□ 0.27
CCDC38-207ENST00000549752 ITSN2Q9NZM3 1697 aa16.69■□□□□ 0.26
CCDC38-207ENST00000549752 KDM5CP41229 1560 aa16.68■□□□□ 0.26
CCDC38-207ENST00000549752 HECW2Q9P2P5 1572 aa16.68■□□□□ 0.26
CCDC38-207ENST00000549752 MADDQ8WXG6 1647 aa16.67■□□□□ 0.26
CCDC38-207ENST00000549752 MTUS2Q5JR59 1369 aa16.66■□□□□ 0.26
CCDC38-207ENST00000549752 ABCC1P33527 1531 aa16.66■□□□□ 0.26
CCDC38-207ENST00000549752 FER1L4A9Z1Z3 1794 aa16.66■□□□□ 0.26
CCDC38-207ENST00000549752 RIMS1Q86UR5 1692 aaKnown RBP16.65■□□□□ 0.26
CCDC38-207ENST00000549752 EHBP1L1Q8N3D4 1523 aa16.65■□□□□ 0.26
CCDC38-207ENST00000549752 YEATS2Q9ULM3 1422 aa16.64■□□□□ 0.25
CCDC38-207ENST00000549752 ATP10AO60312 1499 aa16.64■□□□□ 0.25
CCDC38-207ENST00000549752 C9orf84Q5VXU9 1444 aa16.63■□□□□ 0.25
CCDC38-207ENST00000549752 PTPRMP28827 1452 aa16.63■□□□□ 0.25
CCDC38-207ENST00000549752 MYT1LQ9UL68 1186 aa16.62■□□□□ 0.25
CCDC38-207ENST00000549752 SIGLEC1Q9BZZ2 1709 aa16.62■□□□□ 0.25
CCDC38-207ENST00000549752 PLEKHH2Q8IVE3 1493 aa16.61■□□□□ 0.25
CCDC38-207ENST00000549752 SUPT6HQ7KZ85 1726 aaKnown RBP16.61■□□□□ 0.25
CCDC38-207ENST00000549752 CCNB3Q8WWL7 1395 aa16.61■□□□□ 0.25
CCDC38-207ENST00000549752 MLH3Q9UHC1 1453 aa16.61■□□□□ 0.25
CCDC38-207ENST00000549752 GPATCH8Q9UKJ3 1502 aaKnown RBP16.6■□□□□ 0.25
CCDC38-207ENST00000549752 REREQ9P2R6 1566 aa16.6■□□□□ 0.25
CCDC38-207ENST00000549752 SAMD9LQ8IVG5 1584 aa16.6■□□□□ 0.25
CCDC38-207ENST00000549752 AFAP1Q8N556 730 aa16.59■□□□□ 0.25
CCDC38-207ENST00000549752 DIP2CQ9Y2E4 1556 aa16.59■□□□□ 0.25
CCDC38-207ENST00000549752 KIDINS220Q9ULH0 1771 aa16.58■□□□□ 0.24
CCDC38-207ENST00000549752 ABCA6Q8N139 1617 aa16.57■□□□□ 0.24
CCDC38-207ENST00000549752 CFDP1Q9UEE9 299 aaPredicted RBP16.57■□□□□ 0.24
CCDC38-207ENST00000549752 ZNF777Q9ULD5 760 aaPredicted RBP16.57■□□□□ 0.24
CCDC38-207ENST00000549752 TIAM1Q13009 1591 aa16.56■□□□□ 0.24
CCDC38-207ENST00000549752 SYCP2Q9BX26 1530 aa16.56■□□□□ 0.24
CCDC38-207ENST00000549752 VPS8Q8N3P4 1428 aa16.56■□□□□ 0.24
CCDC38-207ENST00000549752 ARHGEF12Q9NZN5 1544 aa16.55■□□□□ 0.24
CCDC38-207ENST00000549752 KIAA1107Q9UPP5 1409 aa16.55■□□□□ 0.24
CCDC38-207ENST00000549752 TRAPPC8Q9Y2L5 1435 aa16.55■□□□□ 0.24
CCDC38-207ENST00000549752 SETD1BQ9UPS6 1966 aaKnown RBP16.55■□□□□ 0.24
CCDC38-207ENST00000549752 LOC105371045A0A1W2PR82 267 aa16.55■□□□□ 0.24
CCDC38-207ENST00000549752 AGLP35573 1532 aa16.52■□□□□ 0.24
CCDC38-207ENST00000549752 MLECQ14165 292 aa16.52■□□□□ 0.24
CCDC38-207ENST00000549752 MAP3K1Q13233 1512 aa16.51■□□□□ 0.23
CCDC38-207ENST00000549752 ADGBQ8N7X0 1667 aa16.5■□□□□ 0.23
CCDC38-207ENST00000549752 INO80Q9ULG1 1556 aaPredicted RBP16.5■□□□□ 0.23
CCDC38-207ENST00000549752 ATP7AQ04656 1500 aa16.5■□□□□ 0.23
CCDC38-207ENST00000549752 SPAG9O60271 1321 aaKnown RBP16.49■□□□□ 0.23
CCDC38-207ENST00000549752 NCOA2Q15596 1464 aa16.48■□□□□ 0.23
CCDC38-207ENST00000549752 PREX1Q8TCU6 1659 aa16.47■□□□□ 0.23
CCDC38-207ENST00000549752 HNRNPMP52272 730 aaKnown RBP eCLIP16.47■□□□□ 0.23
CCDC38-207ENST00000549752 ESF1Q9H501 851 aaKnown RBP16.47■□□□□ 0.23
CCDC38-207ENST00000549752 LRRC9Q6ZRR7 1453 aa16.46■□□□□ 0.23
CCDC38-207ENST00000549752 MROH2AA6NES4 1674 aa16.44■□□□□ 0.22
CCDC38-207ENST00000549752 C3P01024 1663 aa16.44■□□□□ 0.22
CCDC38-207ENST00000549752 LMTK3Q96Q04 1460 aa16.43■□□□□ 0.22
CCDC38-207ENST00000549752 APLP2Q06481 763 aa16.43■□□□□ 0.22
CCDC38-207ENST00000549752 RSPH4AQ5TD94 716 aa16.43■□□□□ 0.22
CCDC38-207ENST00000549752 CNTLNQ9NXG0 1405 aa16.42■□□□□ 0.22
CCDC38-207ENST00000549752 PLXNC1O60486 1568 aa16.42■□□□□ 0.22
CCDC38-207ENST00000549752 CAMSAP2Q08AD1 1489 aa16.42■□□□□ 0.22
CCDC38-207ENST00000549752 RTEL1-TNFRSF6BF6WH68 1400 aa16.41■□□□□ 0.22
CCDC38-207ENST00000549752 A2MP01023 1474 aa16.41■□□□□ 0.22
CCDC38-207ENST00000549752 CCDC141Q6ZP82 1450 aa16.41■□□□□ 0.22
CCDC38-207ENST00000549752 MBD5Q9P267 1494 aa16.41■□□□□ 0.22
CCDC38-207ENST00000549752 ARHGEF5Q12774 1597 aa16.4■□□□□ 0.22
CCDC38-207ENST00000549752 ZNF644Q9H582 1327 aaPredicted RBP16.39■□□□□ 0.21
CCDC38-207ENST00000549752 CLTCQ00610 1675 aaKnown RBP16.37■□□□□ 0.21
CCDC38-207ENST00000549752 MIA2Q96PC5 1412 aa16.36■□□□□ 0.21
CCDC38-207ENST00000549752 MYOM3Q5VTT5 1437 aa16.35■□□□□ 0.21
CCDC38-207ENST00000549752 TSPY4P0CV99 314 aa16.34■□□□□ 0.21
CCDC38-207ENST00000549752 TSPY10P0CW01 314 aa16.34■□□□□ 0.21
CCDC38-207ENST00000549752 RNF216Q9NWF9 866 aaPredicted RBP16.34■□□□□ 0.21
CCDC38-207ENST00000549752 UHRF1BP1Q6BDS2 1440 aa16.34■□□□□ 0.21
CCDC38-207ENST00000549752 CEBPAP49715 358 aaPredicted RBP16.33■□□□□ 0.2
CCDC38-207ENST00000549752 MAST1Q9Y2H9 1570 aa16.32■□□□□ 0.2
CCDC38-207ENST00000549752 FAM135AQ9P2D6 1515 aa16.31■□□□□ 0.2
CCDC38-207ENST00000549752 DHX29Q7Z478 1369 aaKnown RBP16.31■□□□□ 0.2
CCDC38-207ENST00000549752 ZBTB22O15209 634 aa16.31■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms