RNA–Protein interactions for RNA: ENST00000549727.1

ATP2B1-206, Transcript of ATPase plasma membrane Ca2+ transporting 1, humanhuman

TSL 2

Gene ATP2B1, Length 1,430 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATP2B1-206ENST00000549727 FAM205CA6NFA0 338 aa12.88□□□□□ -0.35
ATP2B1-206ENST00000549727 CHGAP10645 457 aaKnown RBP12.88□□□□□ -0.35
ATP2B1-206ENST00000549727 KIF3CO14782 793 aa12.86□□□□□ -0.35
ATP2B1-206ENST00000549727 HOXB1P14653 301 aaPredicted RBP12.86□□□□□ -0.35
ATP2B1-206ENST00000549727 HS3ST6Q96QI5 342 aa12.86□□□□□ -0.35
ATP2B1-206ENST00000549727 NKX1-1Q15270 411 aaPredicted RBP12.85□□□□□ -0.35
ATP2B1-206ENST00000549727 C2orf72A6NCS6 295 aa12.84□□□□□ -0.35
ATP2B1-206ENST00000549727 DOK7Q18PE1 504 aa12.84□□□□□ -0.35
ATP2B1-206ENST00000549727 ZNF710Q8N1W2 664 aa12.83□□□□□ -0.36
ATP2B1-206ENST00000549727 GPR153Q6NV75 609 aa12.82□□□□□ -0.36
ATP2B1-206ENST00000549727 KHSRPQ92945 711 aaKnown RBP eCLIP12.79□□□□□ -0.36
ATP2B1-206ENST00000549727 KRTAP3-3Q9BYR6 98 aa12.79□□□□□ -0.36
ATP2B1-206ENST00000549727 KRTAP3-2Q9BYR7 98 aa12.79□□□□□ -0.36
ATP2B1-206ENST00000549727 ARSIQ5FYB1 569 aa12.77□□□□□ -0.37
ATP2B1-206ENST00000549727 DNAJC5Q9H3Z4 198 aa12.76□□□□□ -0.37
ATP2B1-206ENST00000549727 SPNS2Q8IVW8 549 aa12.73□□□□□ -0.37
ATP2B1-206ENST00000549727 RIMBP2O15034 1052 aa12.71□□□□□ -0.37
ATP2B1-206ENST00000549727 ZSWIM6Q9HCJ5 1215 aa12.71□□□□□ -0.37
ATP2B1-206ENST00000549727 ERBB3P21860 1342 aa12.71□□□□□ -0.38
ATP2B1-206ENST00000549727 VARS2Q5ST30 1063 aaKnown RBP12.69□□□□□ -0.38
ATP2B1-206ENST00000549727 TMC2Q8TDI7 906 aa12.66□□□□□ -0.38
ATP2B1-206ENST00000549727 MMRN1Q13201 1228 aa12.64□□□□□ -0.39
ATP2B1-206ENST00000549727 GTPBP6O43824 516 aaPredicted RBP12.63□□□□□ -0.39
ATP2B1-206ENST00000549727 NUDT7P0C024 238 aa12.62□□□□□ -0.39
ATP2B1-206ENST00000549727 SLC34A2O95436 690 aa12.61□□□□□ -0.39
ATP2B1-206ENST00000549727 PCDHGA4Q9Y5G9 962 aa12.61□□□□□ -0.39
ATP2B1-206ENST00000549727 DSG2Q14126 1118 aa12.6□□□□□ -0.39
ATP2B1-206ENST00000549727 GPHNQ9NQX3 736 aaPredicted RBP12.6□□□□□ -0.39
ATP2B1-206ENST00000549727 ZNF316A6NFI3 1004 aaPredicted RBP12.59□□□□□ -0.39
ATP2B1-206ENST00000549727 DCAF8L2P0C7V8 631 aa12.59□□□□□ -0.39
ATP2B1-206ENST00000549727 FOXK1P85037 733 aa12.59□□□□□ -0.39
ATP2B1-206ENST00000549727 ZNF687Q8N1G0 1237 aa12.59□□□□□ -0.39
ATP2B1-206ENST00000549727 PLPP6Q8IY26 295 aa12.58□□□□□ -0.4
ATP2B1-206ENST00000549727 LHX6Q9UPM6 363 aa12.55□□□□□ -0.4
ATP2B1-206ENST00000549727 KDM4FA0A1W2PPD8 638 aa12.54□□□□□ -0.4
ATP2B1-206ENST00000549727 POTEEQ6S8J3 1075 aa12.53□□□□□ -0.4
ATP2B1-206ENST00000549727 CRISPLD2Q9H0B8 497 aa12.53□□□□□ -0.4
ATP2B1-206ENST00000549727 NCKAP5LQ9HCH0 1330 aa12.52□□□□□ -0.41
ATP2B1-206ENST00000549727 PTCD2Q8WV60 388 aaKnown RBP12.51□□□□□ -0.41
ATP2B1-206ENST00000549727 RYDENQ9NUL5 291 aaKnown RBP12.46□□□□□ -0.41
ATP2B1-206ENST00000549727 CADPS2Q86UW7 1296 aa12.45□□□□□ -0.42
ATP2B1-206ENST00000549727 AXIN2Q9Y2T1 843 aa12.45□□□□□ -0.42
ATP2B1-206ENST00000549727 RTN4Q9NQC3 1192 aaKnown RBP12.45□□□□□ -0.42
ATP2B1-206ENST00000549727 PPP1R15BQ5SWA1 713 aa12.41□□□□□ -0.42
ATP2B1-206ENST00000549727 OXER1Q8TDS5 423 aa12.41□□□□□ -0.42
ATP2B1-206ENST00000549727 UPF1Q92900 1129 aaKnown RBP eCLIP12.41□□□□□ -0.42
ATP2B1-206ENST00000549727 PDE4AP27815 886 aa12.39□□□□□ -0.43
ATP2B1-206ENST00000549727 ANKRD13DQ6ZTN6 518 aa12.39□□□□□ -0.43
ATP2B1-206ENST00000549727 LARP6Q9BRS8 491 aaKnown RBP12.39□□□□□ -0.43
ATP2B1-206ENST00000549727 LSM11P83369 360 aaKnown RBP eCLIP12.36□□□□□ -0.43
ATP2B1-206ENST00000549727 MFSD10Q14728 455 aa12.33□□□□□ -0.44
ATP2B1-206ENST00000549727 TBC1D12O60347 775 aa12.32□□□□□ -0.44
ATP2B1-206ENST00000549727 AMER1Q5JTC6 1135 aaPredicted RBP12.32□□□□□ -0.44
ATP2B1-206ENST00000549727 BBXQ8WY36 941 aaPredicted RBP12.32□□□□□ -0.44
ATP2B1-206ENST00000549727 PSEN2P49810 448 aa12.31□□□□□ -0.44
ATP2B1-206ENST00000549727 DDX27Q96GQ7 796 aaKnown RBP12.31□□□□□ -0.44
ATP2B1-206ENST00000549727 DMRTA1Q5VZB9 504 aa12.3□□□□□ -0.44
ATP2B1-206ENST00000549727 EMILIN3Q9NT22 766 aa12.3□□□□□ -0.44
ATP2B1-206ENST00000549727 MYT1LQ9UL68 1186 aa12.3□□□□□ -0.44
ATP2B1-206ENST00000549727 RNF166Q96A37 237 aaPredicted RBP12.29□□□□□ -0.44
ATP2B1-206ENST00000549727 PBX2P40425 430 aa12.28□□□□□ -0.44
ATP2B1-206ENST00000549727 ARHGAP33O14559 1287 aa12.28□□□□□ -0.44
ATP2B1-206ENST00000549727 ANO8Q9HCE9 1232 aaPredicted RBP12.27□□□□□ -0.45
ATP2B1-206ENST00000549727 PSDA5PKW4 1024 aaPredicted RBP12.25□□□□□ -0.45
ATP2B1-206ENST00000549727 EVI5O60447 810 aa12.23□□□□□ -0.45
ATP2B1-206ENST00000549727 PPP4R3BQ5MIZ7 849 aa12.23□□□□□ -0.45
ATP2B1-206ENST00000549727 ADGRD1Q6QNK2 874 aa12.21□□□□□ -0.45
ATP2B1-206ENST00000549727 ZNF454Q8N9F8 522 aa12.21□□□□□ -0.45
ATP2B1-206ENST00000549727 FOSBP53539 338 aa12.2□□□□□ -0.46
ATP2B1-206ENST00000549727 MAP3K9P80192 1104 aa12.19□□□□□ -0.46
ATP2B1-206ENST00000549727 HRO43593 1189 aa12.18□□□□□ -0.46
ATP2B1-206ENST00000549727 SPRYD3Q8NCJ5 442 aa12.18□□□□□ -0.46
ATP2B1-206ENST00000549727 PTGER2P43116 358 aa12.17□□□□□ -0.46
ATP2B1-206ENST00000549727 KCNK17Q96T54 332 aa12.17□□□□□ -0.46
ATP2B1-206ENST00000549727 CAMK2BQ13554 666 aa12.16□□□□□ -0.46
ATP2B1-206ENST00000549727 PAXIP1Q6ZW49 1069 aaPredicted RBP12.14□□□□□ -0.47
ATP2B1-206ENST00000549727 ADAM33Q9BZ11 813 aa12.14□□□□□ -0.47
ATP2B1-206ENST00000549727 CFAP44Q96MT7 982 aa12.13□□□□□ -0.47
ATP2B1-206ENST00000549727 BCL2L12Q9HB09 334 aa12.13□□□□□ -0.47
ATP2B1-206ENST00000549727 TK2O00142 265 aa12.12□□□□□ -0.47
ATP2B1-206ENST00000549727 JPH4Q96JJ6 628 aa12.11□□□□□ -0.47
ATP2B1-206ENST00000549727 PCDHGA10Q9Y5H3 936 aa12.11□□□□□ -0.47
ATP2B1-206ENST00000549727 DPYSL4O14531 572 aa12.11□□□□□ -0.47
ATP2B1-206ENST00000549727 ZBTB4Q9P1Z0 1013 aaPredicted RBP12.1□□□□□ -0.47
ATP2B1-206ENST00000549727 VPS9D1Q9Y2B5 631 aa12.1□□□□□ -0.47
ATP2B1-206ENST00000549727 ZDHHC16Q969W1 377 aa12.09□□□□□ -0.47
ATP2B1-206ENST00000549727 ZBED2Q9BTP6 218 aa12.06□□□□□ -0.48
ATP2B1-206ENST00000549727 PTPREP23469 700 aa12.04□□□□□ -0.48
ATP2B1-206ENST00000549727 BHMG1C9JSJ3 638 aaPredicted RBP12.03□□□□□ -0.48
ATP2B1-206ENST00000549727 COL9A1P20849 921 aa12.03□□□□□ -0.48
ATP2B1-206ENST00000549727 SLC4A5Q9BY07 1137 aa12.02□□□□□ -0.49
ATP2B1-206ENST00000549727 PHF14O94880 888 aa12.01□□□□□ -0.49
ATP2B1-206ENST00000549727 DDX12PQ92771 950 aa11.99□□□□□ -0.49
ATP2B1-206ENST00000549727 KCTD12Q96CX2 325 aaKnown RBP11.99□□□□□ -0.49
ATP2B1-206ENST00000549727 PROX2Q3B8N5 592 aa11.98□□□□□ -0.49
ATP2B1-206ENST00000549727 TYW1BQ6NUM6 668 aa11.97□□□□□ -0.49
ATP2B1-206ENST00000549727 KCNH8Q96L42 1107 aa11.97□□□□□ -0.49
ATP2B1-206ENST00000549727 TSHZ2Q9NRE2 1034 aa11.94□□□□□ -0.5
ATP2B1-206ENST00000549727 HCSTQ9UBK5 93 aa11.94□□□□□ -0.5
ATP2B1-206ENST00000549727 E2F4Q16254 413 aa11.94□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 169.5 ms