RNA–Protein interactions for RNA: ENST00000549705.1

CNOT2-218, Transcript of CCR4-NOT transcription complex subunit 2, humanhuman

TSL 3

Gene CNOT2, Length 550 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT2-218ENST00000549705 FAM205CA6NFA0 338 aa14.5□□□□□ -0.09
CNOT2-218ENST00000549705 HOXB1P14653 301 aaPredicted RBP14.49□□□□□ -0.09
CNOT2-218ENST00000549705 ZNF710Q8N1W2 664 aa14.49□□□□□ -0.09
CNOT2-218ENST00000549705 RIMBP2O15034 1052 aa14.43□□□□□ -0.1
CNOT2-218ENST00000549705 SPNS2Q8IVW8 549 aa14.43□□□□□ -0.1
CNOT2-218ENST00000549705 KRTAP3-3Q9BYR6 98 aa14.43□□□□□ -0.1
CNOT2-218ENST00000549705 KRTAP3-2Q9BYR7 98 aa14.43□□□□□ -0.1
CNOT2-218ENST00000549705 ZSWIM6Q9HCJ5 1215 aa14.4□□□□□ -0.1
CNOT2-218ENST00000549705 MMRN1Q13201 1228 aa14.38□□□□□ -0.11
CNOT2-218ENST00000549705 GPR153Q6NV75 609 aa14.35□□□□□ -0.11
CNOT2-218ENST00000549705 ERBB3P21860 1342 aa14.34□□□□□ -0.11
CNOT2-218ENST00000549705 KIF3CO14782 793 aa14.33□□□□□ -0.12
CNOT2-218ENST00000549705 C2orf72A6NCS6 295 aa14.29□□□□□ -0.12
CNOT2-218ENST00000549705 VARS2Q5ST30 1063 aaKnown RBP14.28□□□□□ -0.12
CNOT2-218ENST00000549705 PPP1R37O75864 691 aa14.26□□□□□ -0.13
CNOT2-218ENST00000549705 HS6ST3Q8IZP7 471 aa14.26□□□□□ -0.13
CNOT2-218ENST00000549705 ARSIQ5FYB1 569 aa14.25□□□□□ -0.13
CNOT2-218ENST00000549705 KHSRPQ92945 711 aaKnown RBP eCLIP14.21□□□□□ -0.13
CNOT2-218ENST00000549705 ZNF687Q8N1G0 1237 aa14.19□□□□□ -0.14
CNOT2-218ENST00000549705 TMC2Q8TDI7 906 aa14.18□□□□□ -0.14
CNOT2-218ENST00000549705 ZNF316A6NFI3 1004 aaPredicted RBP14.15□□□□□ -0.14
CNOT2-218ENST00000549705 SLC34A2O95436 690 aa14.15□□□□□ -0.14
CNOT2-218ENST00000549705 CHGAP10645 457 aaKnown RBP14.15□□□□□ -0.14
CNOT2-218ENST00000549705 DNAJC5Q9H3Z4 198 aa14.11□□□□□ -0.15
CNOT2-218ENST00000549705 NUDT7P0C024 238 aa14.1□□□□□ -0.15
CNOT2-218ENST00000549705 PCDHGA4Q9Y5G9 962 aa14.1□□□□□ -0.15
CNOT2-218ENST00000549705 NKX1-1Q15270 411 aaPredicted RBP14.08□□□□□ -0.16
CNOT2-218ENST00000549705 FOXK1P85037 733 aa14.03□□□□□ -0.16
CNOT2-218ENST00000549705 LHX6Q9UPM6 363 aa14.03□□□□□ -0.16
CNOT2-218ENST00000549705 GPHNQ9NQX3 736 aaPredicted RBP14.02□□□□□ -0.17
CNOT2-218ENST00000549705 PLPP6Q8IY26 295 aa13.99□□□□□ -0.17
CNOT2-218ENST00000549705 PTCD2Q8WV60 388 aaKnown RBP13.98□□□□□ -0.17
CNOT2-218ENST00000549705 RNF166Q96A37 237 aaPredicted RBP13.98□□□□□ -0.17
CNOT2-218ENST00000549705 KDM4FA0A1W2PPD8 638 aa13.97□□□□□ -0.17
CNOT2-218ENST00000549705 DSG2Q14126 1118 aa13.97□□□□□ -0.17
CNOT2-218ENST00000549705 RYDENQ9NUL5 291 aaKnown RBP13.97□□□□□ -0.17
CNOT2-218ENST00000549705 LSM11P83369 360 aaKnown RBP eCLIP13.96□□□□□ -0.17
CNOT2-218ENST00000549705 MYT1LQ9UL68 1186 aa13.96□□□□□ -0.17
CNOT2-218ENST00000549705 PBX2P40425 430 aa13.95□□□□□ -0.18
CNOT2-218ENST00000549705 POTEEQ6S8J3 1075 aa13.95□□□□□ -0.18
CNOT2-218ENST00000549705 PTGER2P43116 358 aa13.94□□□□□ -0.18
CNOT2-218ENST00000549705 ANKRD13DQ6ZTN6 518 aa13.94□□□□□ -0.18
CNOT2-218ENST00000549705 CRISPLD2Q9H0B8 497 aa13.89□□□□□ -0.19
CNOT2-218ENST00000549705 AXIN2Q9Y2T1 843 aa13.89□□□□□ -0.19
CNOT2-218ENST00000549705 PSDA5PKW4 1024 aaPredicted RBP13.88□□□□□ -0.19
CNOT2-218ENST00000549705 GTPBP6O43824 516 aaPredicted RBP13.86□□□□□ -0.19
CNOT2-218ENST00000549705 TBC1D12O60347 775 aa13.83□□□□□ -0.2
CNOT2-218ENST00000549705 OXER1Q8TDS5 423 aa13.82□□□□□ -0.2
CNOT2-218ENST00000549705 NCKAP5LQ9HCH0 1330 aa13.82□□□□□ -0.2
CNOT2-218ENST00000549705 ARHGAP33O14559 1287 aa13.81□□□□□ -0.2
CNOT2-218ENST00000549705 PPP1R15BQ5SWA1 713 aa13.8□□□□□ -0.2
CNOT2-218ENST00000549705 PPP4R3BQ5MIZ7 849 aa13.77□□□□□ -0.21
CNOT2-218ENST00000549705 UPF1Q92900 1129 aaKnown RBP eCLIP13.77□□□□□ -0.21
CNOT2-218ENST00000549705 DCAF8L2P0C7V8 631 aa13.76□□□□□ -0.21
CNOT2-218ENST00000549705 PDE4AP27815 886 aa13.76□□□□□ -0.21
CNOT2-218ENST00000549705 ADGRD1Q6QNK2 874 aa13.76□□□□□ -0.21
CNOT2-218ENST00000549705 PSEN2P49810 448 aa13.73□□□□□ -0.21
CNOT2-218ENST00000549705 DMRTA1Q5VZB9 504 aa13.73□□□□□ -0.21
CNOT2-218ENST00000549705 TK2O00142 265 aa13.71□□□□□ -0.21
CNOT2-218ENST00000549705 MFSD10Q14728 455 aa13.68□□□□□ -0.22
CNOT2-218ENST00000549705 DDX27Q96GQ7 796 aaKnown RBP13.68□□□□□ -0.22
CNOT2-218ENST00000549705 LARP6Q9BRS8 491 aaKnown RBP13.68□□□□□ -0.22
CNOT2-218ENST00000549705 HRO43593 1189 aa13.67□□□□□ -0.22
CNOT2-218ENST00000549705 ZNF454Q8N9F8 522 aa13.65□□□□□ -0.22
CNOT2-218ENST00000549705 KCNK17Q96T54 332 aa13.65□□□□□ -0.22
CNOT2-218ENST00000549705 FOSBP53539 338 aa13.63□□□□□ -0.23
CNOT2-218ENST00000549705 ANO8Q9HCE9 1232 aaPredicted RBP13.63□□□□□ -0.23
CNOT2-218ENST00000549705 CADPS2Q86UW7 1296 aa13.62□□□□□ -0.23
CNOT2-218ENST00000549705 BCL2L12Q9HB09 334 aa13.62□□□□□ -0.23
CNOT2-218ENST00000549705 EVI5O60447 810 aa13.6□□□□□ -0.23
CNOT2-218ENST00000549705 KCNH8Q96L42 1107 aa13.6□□□□□ -0.23
CNOT2-218ENST00000549705 JPH4Q96JJ6 628 aa13.58□□□□□ -0.24
CNOT2-218ENST00000549705 EMILIN3Q9NT22 766 aa13.58□□□□□ -0.24
CNOT2-218ENST00000549705 HCSTQ9UBK5 93 aa13.56□□□□□ -0.24
CNOT2-218ENST00000549705 VPS9D1Q9Y2B5 631 aa13.56□□□□□ -0.24
CNOT2-218ENST00000549705 MAP3K9P80192 1104 aa13.54□□□□□ -0.24
CNOT2-218ENST00000549705 SLC4A5Q9BY07 1137 aa13.54□□□□□ -0.24
CNOT2-218ENST00000549705 PTPREP23469 700 aa13.52□□□□□ -0.25
CNOT2-218ENST00000549705 ZDHHC16Q969W1 377 aa13.51□□□□□ -0.25
CNOT2-218ENST00000549705 ADAM33Q9BZ11 813 aa13.51□□□□□ -0.25
CNOT2-218ENST00000549705 KCTD12Q96CX2 325 aaKnown RBP13.49□□□□□ -0.25
CNOT2-218ENST00000549705 ZBED2Q9BTP6 218 aa13.49□□□□□ -0.25
CNOT2-218ENST00000549705 BBXQ8WY36 941 aaPredicted RBP13.48□□□□□ -0.25
CNOT2-218ENST00000549705 STAC3Q96MF2 364 aa13.48□□□□□ -0.25
CNOT2-218ENST00000549705 CAMK2BQ13554 666 aa13.47□□□□□ -0.25
CNOT2-218ENST00000549705 BHMG1C9JSJ3 638 aaPredicted RBP13.46□□□□□ -0.25
CNOT2-218ENST00000549705 PLA2G2EQ9NZK7 142 aa13.45□□□□□ -0.26
CNOT2-218ENST00000549705 PCDHGA10Q9Y5H3 936 aa13.45□□□□□ -0.26
CNOT2-218ENST00000549705 PHF14O94880 888 aa13.39□□□□□ -0.27
CNOT2-218ENST00000549705 PPP1R3GB7ZBB8 358 aa13.38□□□□□ -0.27
CNOT2-218ENST00000549705 DPYSL4O14531 572 aa13.38□□□□□ -0.27
CNOT2-218ENST00000549705 AMER1Q5JTC6 1135 aaPredicted RBP13.38□□□□□ -0.27
CNOT2-218ENST00000549705 TYW1BQ6NUM6 668 aa13.38□□□□□ -0.27
CNOT2-218ENST00000549705 FBXW7Q969H0 707 aa13.37□□□□□ -0.27
CNOT2-218ENST00000549705 THSD4Q6ZMP0 1018 aa13.35□□□□□ -0.27
CNOT2-218ENST00000549705 MRPL50Q8N5N7 158 aaKnown RBP13.35□□□□□ -0.27
CNOT2-218ENST00000549705 COL9A1P20849 921 aa13.34□□□□□ -0.27
CNOT2-218ENST00000549705 NBPF3Q9H094 633 aa13.34□□□□□ -0.27
CNOT2-218ENST00000549705 PTPN5P54829 565 aa13.33□□□□□ -0.28
CNOT2-218ENST00000549705 SPRYD3Q8NCJ5 442 aa13.33□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 11.6 ms