RNA–Protein interactions for RNA: ENST00000549606.5

CDK4-206, Transcript of cyclin dependent kinase 4, humanhuman

TSL 2 BASIC

Gene CDK4, Length 558 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK4-206ENST00000549606 ZFYVE16Q7Z3T8 1539 aa25.63■■□□□ 1.69
CDK4-206ENST00000549606 CASKIN1Q8WXD9 1431 aa25.63■■□□□ 1.69
CDK4-206ENST00000549606 PTPRMP28827 1452 aa25.62■■□□□ 1.69
CDK4-206ENST00000549606 MADDQ8WXG6 1647 aa25.61■■□□□ 1.69
CDK4-206ENST00000549606 POGZQ7Z3K3 1410 aa25.6■■□□□ 1.69
CDK4-206ENST00000549606 YEATS2Q9ULM3 1422 aa25.6■■□□□ 1.69
CDK4-206ENST00000549606 CCDC18Q5T9S5 1454 aa25.6■■□□□ 1.69
CDK4-206ENST00000549606 ARHGAP5Q13017 1502 aa25.59■■□□□ 1.69
CDK4-206ENST00000549606 MAGI2Q86UL8 1455 aa25.59■■□□□ 1.69
CDK4-206ENST00000549606 SIGLEC1Q9BZZ2 1709 aa25.55■■□□□ 1.68
CDK4-206ENST00000549606 RIMS1Q86UR5 1692 aaKnown RBP25.55■■□□□ 1.68
CDK4-206ENST00000549606 CDC42BPBQ9Y5S2 1711 aa25.54■■□□□ 1.68
CDK4-206ENST00000549606 FYCO1Q9BQS8 1478 aa25.53■■□□□ 1.68
CDK4-206ENST00000549606 MLECQ14165 292 aa25.5■■□□□ 1.67
CDK4-206ENST00000549606 PREX2Q70Z35 1606 aa25.48■■□□□ 1.67
CDK4-206ENST00000549606 ZNF518AQ6AHZ1 1483 aa25.48■■□□□ 1.67
CDK4-206ENST00000549606 AFAP1Q8N556 730 aa25.48■■□□□ 1.67
CDK4-206ENST00000549606 MYT1LQ9UL68 1186 aa25.48■■□□□ 1.67
CDK4-206ENST00000549606 ATP10AO60312 1499 aa25.47■■□□□ 1.67
CDK4-206ENST00000549606 PLPPR3Q6T4P5 718 aa25.47■■□□□ 1.67
CDK4-206ENST00000549606 CDC42BPAQ5VT25 1732 aa25.44■■□□□ 1.66
CDK4-206ENST00000549606 C9orf84Q5VXU9 1444 aa25.44■■□□□ 1.66
CDK4-206ENST00000549606 FER1L4A9Z1Z3 1794 aa25.43■■□□□ 1.66
CDK4-206ENST00000549606 KDM5CP41229 1560 aa25.43■■□□□ 1.66
CDK4-206ENST00000549606 ITSN2Q9NZM3 1697 aa25.39■■□□□ 1.66
CDK4-206ENST00000549606 ABCC1P33527 1531 aa25.39■■□□□ 1.66
CDK4-206ENST00000549606 ARHGEF12Q9NZN5 1544 aa25.37■■□□□ 1.65
CDK4-206ENST00000549606 ILDR1Q86SU0 546 aaPredicted RBP25.37■■□□□ 1.65
CDK4-206ENST00000549606 ZNF777Q9ULD5 760 aaPredicted RBP25.37■■□□□ 1.65
CDK4-206ENST00000549606 TRAPPC8Q9Y2L5 1435 aa25.37■■□□□ 1.65
CDK4-206ENST00000549606 DIP2CQ9Y2E4 1556 aa25.35■■□□□ 1.65
CDK4-206ENST00000549606 LMTK3Q96Q04 1460 aa25.35■■□□□ 1.65
CDK4-206ENST00000549606 MLH3Q9UHC1 1453 aa25.34■■□□□ 1.65
CDK4-206ENST00000549606 ABCA6Q8N139 1617 aa25.34■■□□□ 1.65
CDK4-206ENST00000549606 CEP162Q5TB80 1403 aa25.32■■□□□ 1.64
CDK4-206ENST00000549606 GPATCH8Q9UKJ3 1502 aaKnown RBP25.32■■□□□ 1.64
CDK4-206ENST00000549606 SAMD9LQ8IVG5 1584 aa25.31■■□□□ 1.64
CDK4-206ENST00000549606 MTUS2Q5JR59 1369 aa25.31■■□□□ 1.64
CDK4-206ENST00000549606 REREQ9P2R6 1566 aa25.28■■□□□ 1.64
CDK4-206ENST00000549606 KIDINS220Q9ULH0 1771 aa25.28■■□□□ 1.64
CDK4-206ENST00000549606 CCNB3Q8WWL7 1395 aa25.27■■□□□ 1.64
CDK4-206ENST00000549606 SYCP2Q9BX26 1530 aa25.27■■□□□ 1.64
CDK4-206ENST00000549606 HNRNPMP52272 730 aaKnown RBP eCLIP25.26■■□□□ 1.63
CDK4-206ENST00000549606 HSPA2P54652 639 aa25.26■■□□□ 1.63
CDK4-206ENST00000549606 CFDP1Q9UEE9 299 aaPredicted RBP25.26■■□□□ 1.63
CDK4-206ENST00000549606 CEBPAP49715 358 aaPredicted RBP25.25■■□□□ 1.63
CDK4-206ENST00000549606 AGLP35573 1532 aa25.2■■□□□ 1.62
CDK4-206ENST00000549606 EHBP1L1Q8N3D4 1523 aa25.2■■□□□ 1.62
CDK4-206ENST00000549606 SPAG9O60271 1321 aaKnown RBP25.19■■□□□ 1.62
CDK4-206ENST00000549606 LOC105371045A0A1W2PR82 267 aa25.19■■□□□ 1.62
CDK4-206ENST00000549606 PLEKHH2Q8IVE3 1493 aa25.19■■□□□ 1.62
CDK4-206ENST00000549606 PREX1Q8TCU6 1659 aa25.18■■□□□ 1.62
CDK4-206ENST00000549606 ESF1Q9H501 851 aaKnown RBP25.18■■□□□ 1.62
CDK4-206ENST00000549606 TIAM1Q13009 1591 aa25.18■■□□□ 1.62
CDK4-206ENST00000549606 KIAA1107Q9UPP5 1409 aa25.17■■□□□ 1.62
CDK4-206ENST00000549606 ATP7AQ04656 1500 aa25.14■■□□□ 1.62
CDK4-206ENST00000549606 SUPT6HQ7KZ85 1726 aaKnown RBP25.14■■□□□ 1.61
CDK4-206ENST00000549606 C3P01024 1663 aa25.13■■□□□ 1.61
CDK4-206ENST00000549606 ZNF644Q9H582 1327 aaPredicted RBP25.12■■□□□ 1.61
CDK4-206ENST00000549606 INO80Q9ULG1 1556 aaPredicted RBP25.11■■□□□ 1.61
CDK4-206ENST00000549606 SETD1BQ9UPS6 1966 aaKnown RBP25.07■■□□□ 1.6
CDK4-206ENST00000549606 UHRF1BP1Q6BDS2 1440 aa25.07■■□□□ 1.6
CDK4-206ENST00000549606 A2MP01023 1474 aa25.06■■□□□ 1.6
CDK4-206ENST00000549606 NCOA2Q15596 1464 aa25.06■■□□□ 1.6
CDK4-206ENST00000549606 CNTLNQ9NXG0 1405 aa25.05■■□□□ 1.6
CDK4-206ENST00000549606 FBXO41Q8TF61 875 aa25.04■■□□□ 1.6
CDK4-206ENST00000549606 VPS8Q8N3P4 1428 aa25.03■■□□□ 1.6
CDK4-206ENST00000549606 MBD5Q9P267 1494 aa25.03■■□□□ 1.6
CDK4-206ENST00000549606 PLXNC1O60486 1568 aa25.03■■□□□ 1.6
CDK4-206ENST00000549606 ADGBQ8N7X0 1667 aa25.03■■□□□ 1.6
CDK4-206ENST00000549606 MROH2AA6NES4 1674 aa25.01■■□□□ 1.59
CDK4-206ENST00000549606 CLTCQ00610 1675 aaKnown RBP24.99■■□□□ 1.59
CDK4-206ENST00000549606 GGT6Q6P531 493 aa24.99■■□□□ 1.59
CDK4-206ENST00000549606 STRCQ7RTU9 1775 aa24.98■■□□□ 1.59
CDK4-206ENST00000549606 CAMSAP2Q08AD1 1489 aa24.98■■□□□ 1.59
CDK4-206ENST00000549606 ZMYM3Q14202 1370 aa24.97■■□□□ 1.59
CDK4-206ENST00000549606 LRRC9Q6ZRR7 1453 aa24.96■■□□□ 1.59
CDK4-206ENST00000549606 RTEL1-TNFRSF6BF6WH68 1400 aa24.96■■□□□ 1.59
CDK4-206ENST00000549606 CCDC141Q6ZP82 1450 aa24.95■■□□□ 1.58
CDK4-206ENST00000549606 DMRT2Q9Y5R5 561 aa24.93■■□□□ 1.58
CDK4-206ENST00000549606 RSPH4AQ5TD94 716 aa24.92■■□□□ 1.58
CDK4-206ENST00000549606 NPATQ14207 1427 aa24.91■■□□□ 1.58
CDK4-206ENST00000549606 KANK4Q5T7N3 995 aaPredicted RBP24.9■■□□□ 1.58
CDK4-206ENST00000549606 DHX29Q7Z478 1369 aaKnown RBP24.9■■□□□ 1.58
CDK4-206ENST00000549606 CERKQ8TCT0 537 aa24.89■■□□□ 1.58
CDK4-206ENST00000549606 MAP3K1Q13233 1512 aa24.87■■□□□ 1.57
CDK4-206ENST00000549606 PPP6R1Q9UPN7 881 aa24.87■■□□□ 1.57
CDK4-206ENST00000549606 ARHGEF5Q12774 1597 aa24.87■■□□□ 1.57
CDK4-206ENST00000549606 TSPY4P0CV99 314 aa24.86■■□□□ 1.57
CDK4-206ENST00000549606 TSPY10P0CW01 314 aa24.86■■□□□ 1.57
CDK4-206ENST00000549606 KIF3BO15066 747 aa24.85■■□□□ 1.57
CDK4-206ENST00000549606 PTPRKQ15262 1439 aa24.83■■□□□ 1.57
CDK4-206ENST00000549606 CAMSAP1Q5T5Y3 1602 aa24.82■■□□□ 1.56
CDK4-206ENST00000549606 MYO3AQ8NEV4 1616 aa24.82■■□□□ 1.56
CDK4-206ENST00000549606 PTPRTO14522 1441 aa24.8■■□□□ 1.56
CDK4-206ENST00000549606 NCOA1Q15788 1441 aa24.8■■□□□ 1.56
CDK4-206ENST00000549606 APLP2Q06481 763 aa24.8■■□□□ 1.56
CDK4-206ENST00000549606 MYOM3Q5VTT5 1437 aa24.78■■□□□ 1.56
CDK4-206ENST00000549606 ZNF142P52746 1687 aaPredicted RBP24.78■■□□□ 1.56
CDK4-206ENST00000549606 MIA2Q96PC5 1412 aa24.76■■□□□ 1.55
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms