RNA–Protein interactions for RNA: ENST00000549580.1

SNRPF-202, Transcript of small nuclear ribonucleoprotein polypeptide F, humanhuman

TSL 2

Gene SNRPF, Length 757 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPF-202ENST00000549580 LSM11P83369 360 aaKnown RBP eCLIP12.3□□□□□ -0.44
SNRPF-202ENST00000549580 ZNF316A6NFI3 1004 aaPredicted RBP12.29□□□□□ -0.44
SNRPF-202ENST00000549580 KHSRPQ92945 711 aaKnown RBP eCLIP12.28□□□□□ -0.44
SNRPF-202ENST00000549580 SOX12O15370 315 aa12.26□□□□□ -0.45
SNRPF-202ENST00000549580 TRIM41Q8WV44 630 aa12.23□□□□□ -0.45
SNRPF-202ENST00000549580 PHF8Q9UPP1 1060 aa12.22□□□□□ -0.45
SNRPF-202ENST00000549580 PLA2G2EQ9NZK7 142 aa12.2□□□□□ -0.46
SNRPF-202ENST00000549580 POTEEQ6S8J3 1075 aa12.19□□□□□ -0.46
SNRPF-202ENST00000549580 PBX2P40425 430 aa12.18□□□□□ -0.46
SNRPF-202ENST00000549580 RNF25Q96BH1 459 aaPredicted RBP12.16□□□□□ -0.46
SNRPF-202ENST00000549580 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP12.14□□□□□ -0.47
SNRPF-202ENST00000549580 ZFP91Q96JP5 570 aaPredicted RBP12.14□□□□□ -0.47
SNRPF-202ENST00000549580 RIOK3O14730 519 aaKnown RBP12.12□□□□□ -0.47
SNRPF-202ENST00000549580 HCSTQ9UBK5 93 aa12.12□□□□□ -0.47
SNRPF-202ENST00000549580 KIF3CO14782 793 aa12.11□□□□□ -0.47
SNRPF-202ENST00000549580 NUDT7P0C024 238 aa12.11□□□□□ -0.47
SNRPF-202ENST00000549580 AXIN2Q9Y2T1 843 aa12.11□□□□□ -0.47
SNRPF-202ENST00000549580 FBXO22Q8NEZ5 403 aa12.09□□□□□ -0.47
SNRPF-202ENST00000549580 LHX6Q9UPM6 363 aa12.09□□□□□ -0.47
SNRPF-202ENST00000549580 VGFO15240 615 aaPredicted RBP12.07□□□□□ -0.48
SNRPF-202ENST00000549580 C2orf72A6NCS6 295 aa12.04□□□□□ -0.48
SNRPF-202ENST00000549580 NLRP6P59044 892 aa12.04□□□□□ -0.48
SNRPF-202ENST00000549580 SLC34A2O95436 690 aa12.03□□□□□ -0.48
SNRPF-202ENST00000549580 ADGRD1Q6QNK2 874 aa12.03□□□□□ -0.48
SNRPF-202ENST00000549580 PCDHGA4Q9Y5G9 962 aa12.03□□□□□ -0.48
SNRPF-202ENST00000549580 ARHGAP33O14559 1287 aa11.97□□□□□ -0.49
SNRPF-202ENST00000549580 HRO43593 1189 aa11.96□□□□□ -0.49
SNRPF-202ENST00000549580 MFRPQ9BY79 579 aa11.96□□□□□ -0.49
SNRPF-202ENST00000549580 TK2O00142 265 aa11.93□□□□□ -0.5
SNRPF-202ENST00000549580 KDM4FA0A1W2PPD8 638 aa11.92□□□□□ -0.5
SNRPF-202ENST00000549580 BCL11BQ9C0K0 894 aaPredicted RBP11.92□□□□□ -0.5
SNRPF-202ENST00000549580 DMRTA1Q5VZB9 504 aa11.91□□□□□ -0.5
SNRPF-202ENST00000549580 PSDA5PKW4 1024 aaPredicted RBP11.9□□□□□ -0.5
SNRPF-202ENST00000549580 PSEN2P49810 448 aa11.87□□□□□ -0.51
SNRPF-202ENST00000549580 KCTD12Q96CX2 325 aaKnown RBP11.85□□□□□ -0.51
SNRPF-202ENST00000549580 STK24Q9Y6E0 443 aa11.84□□□□□ -0.51
SNRPF-202ENST00000549580 TMC2Q8TDI7 906 aa11.83□□□□□ -0.52
SNRPF-202ENST00000549580 RGS20O76081 388 aa11.81□□□□□ -0.52
SNRPF-202ENST00000549580 PTCD2Q8WV60 388 aaKnown RBP11.8□□□□□ -0.52
SNRPF-202ENST00000549580 TAOK2Q9UL54 1235 aa11.79□□□□□ -0.52
SNRPF-202ENST00000549580 IFFO2Q5TF58 517 aa11.78□□□□□ -0.52
SNRPF-202ENST00000549580 STK25O00506 426 aa11.74□□□□□ -0.53
SNRPF-202ENST00000549580 PPP4R3BQ5MIZ7 849 aa11.74□□□□□ -0.53
SNRPF-202ENST00000549580 IRX2Q9BZI1 471 aaPredicted RBP11.74□□□□□ -0.53
SNRPF-202ENST00000549580 A0A0G2JS52 829 aa11.7□□□□□ -0.54
SNRPF-202ENST00000549580 PPP1R37O75864 691 aa11.7□□□□□ -0.54
SNRPF-202ENST00000549580 STAC3Q96MF2 364 aa11.7□□□□□ -0.54
SNRPF-202ENST00000549580 VPS9D1Q9Y2B5 631 aa11.7□□□□□ -0.54
SNRPF-202ENST00000549580 PTPN5P54829 565 aa11.69□□□□□ -0.54
SNRPF-202ENST00000549580 KCNK17Q96T54 332 aa11.69□□□□□ -0.54
SNRPF-202ENST00000549580 FOXK1P85037 733 aa11.67□□□□□ -0.54
SNRPF-202ENST00000549580 THSD4Q6ZMP0 1018 aa11.64□□□□□ -0.55
SNRPF-202ENST00000549580 PLPP6Q8IY26 295 aa11.64□□□□□ -0.55
SNRPF-202ENST00000549580 SLC4A5Q9BY07 1137 aa11.63□□□□□ -0.55
SNRPF-202ENST00000549580 KCNH8Q96L42 1107 aa11.62□□□□□ -0.55
SNRPF-202ENST00000549580 BHMG1C9JSJ3 638 aaPredicted RBP11.61□□□□□ -0.55
SNRPF-202ENST00000549580 GPHNQ9NQX3 736 aaPredicted RBP11.59□□□□□ -0.55
SNRPF-202ENST00000549580 TBC1D12O60347 775 aa11.58□□□□□ -0.56
SNRPF-202ENST00000549580 DSG2Q14126 1118 aa11.58□□□□□ -0.56
SNRPF-202ENST00000549580 BCL2L12Q9HB09 334 aa11.57□□□□□ -0.56
SNRPF-202ENST00000549580 ECM2O94769 699 aaPredicted RBP11.56□□□□□ -0.56
SNRPF-202ENST00000549580 RGL2O15211 777 aa11.54□□□□□ -0.56
SNRPF-202ENST00000549580 WNT2BQ93097 391 aa11.53□□□□□ -0.56
SNRPF-202ENST00000549580 ZNF454Q8N9F8 522 aa11.52□□□□□ -0.57
SNRPF-202ENST00000549580 ZBED2Q9BTP6 218 aa11.52□□□□□ -0.57
SNRPF-202ENST00000549580 OXER1Q8TDS5 423 aa11.51□□□□□ -0.57
SNRPF-202ENST00000549580 PKD2Q13563 968 aa11.49□□□□□ -0.57
SNRPF-202ENST00000549580 GOLGA8CPA6NN73 597 aa11.47□□□□□ -0.57
SNRPF-202ENST00000549580 ITGBL1O95965 494 aaPredicted RBP11.47□□□□□ -0.57
SNRPF-202ENST00000549580 FOSBP53539 338 aa11.47□□□□□ -0.57
SNRPF-202ENST00000549580 MRPL50Q8N5N7 158 aaKnown RBP11.47□□□□□ -0.57
SNRPF-202ENST00000549580 PTPREP23469 700 aa11.46□□□□□ -0.57
SNRPF-202ENST00000549580 Q6ZNB5 142 aa11.45□□□□□ -0.58
SNRPF-202ENST00000549580 UPF1Q92900 1129 aaKnown RBP eCLIP11.43□□□□□ -0.58
SNRPF-202ENST00000549580 NBPF3Q9H094 633 aa11.41□□□□□ -0.58
SNRPF-202ENST00000549580 JPH4Q96JJ6 628 aa11.39□□□□□ -0.59
SNRPF-202ENST00000549580 LCE2BO14633 110 aa11.38□□□□□ -0.59
SNRPF-202ENST00000549580 ADAM33Q9BZ11 813 aa11.38□□□□□ -0.59
SNRPF-202ENST00000549580 ANO8Q9HCE9 1232 aaPredicted RBP11.38□□□□□ -0.59
SNRPF-202ENST00000549580 ZDHHC16Q969W1 377 aa11.34□□□□□ -0.59
SNRPF-202ENST00000549580 CRISPLD2Q9H0B8 497 aa11.34□□□□□ -0.59
SNRPF-202ENST00000549580 PPP1R15BQ5SWA1 713 aa11.31□□□□□ -0.6
SNRPF-202ENST00000549580 ANKK1Q8NFD2 765 aa11.31□□□□□ -0.6
SNRPF-202ENST00000549580 RABGEF1Q9UJ41 708 aa11.31□□□□□ -0.6
SNRPF-202ENST00000549580 BCAMP50895 628 aa11.3□□□□□ -0.6
SNRPF-202ENST00000549580 SOWAHBA6NEL2 793 aa11.28□□□□□ -0.6
SNRPF-202ENST00000549580 PPP1R3GB7ZBB8 358 aa11.28□□□□□ -0.6
SNRPF-202ENST00000549580 EVI5O60447 810 aa11.28□□□□□ -0.6
SNRPF-202ENST00000549580 PROX2Q3B8N5 592 aa11.28□□□□□ -0.6
SNRPF-202ENST00000549580 HS6ST3Q8IZP7 471 aa11.28□□□□□ -0.6
SNRPF-202ENST00000549580 LAPTM4AQ15012 233 aa11.27□□□□□ -0.61
SNRPF-202ENST00000549580 NYAP1Q6ZVC0 841 aa11.27□□□□□ -0.61
SNRPF-202ENST00000549580 COL9A1P20849 921 aa11.24□□□□□ -0.61
SNRPF-202ENST00000549580 KCNC4Q03721 635 aa11.24□□□□□ -0.61
SNRPF-202ENST00000549580 LAPTM4BQ86VI4 370 aa11.24□□□□□ -0.61
SNRPF-202ENST00000549580 WBP1LQ9NX94 342 aa11.23□□□□□ -0.61
SNRPF-202ENST00000549580 NCKAP5LQ9HCH0 1330 aa11.23□□□□□ -0.61
SNRPF-202ENST00000549580 TRAF7Q6Q0C0 670 aa11.22□□□□□ -0.61
SNRPF-202ENST00000549580 ZFRQ96KR1 1074 aaKnown RBP11.2□□□□□ -0.62
SNRPF-202ENST00000549580 PCDHGA10Q9Y5H3 936 aa11.2□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 7.5 ms