RNA–Protein interactions for RNA: ENST00000549347.1

RAPGEF3-220, Transcript of Rap guanine nucleotide exchange factor 3, humanhuman

TSL 4

Gene RAPGEF3, Length 573 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAPGEF3-220ENST00000549347 ITSN2Q9NZM3 1697 aa27.87■■■□□ 2.05
RAPGEF3-220ENST00000549347 AKNAQ7Z591 1439 aa27.86■■■□□ 2.05
RAPGEF3-220ENST00000549347 GPATCH8Q9UKJ3 1502 aaKnown RBP27.85■■■□□ 2.05
RAPGEF3-220ENST00000549347 FRMPD1Q5SYB0 1578 aa27.85■■■□□ 2.05
RAPGEF3-220ENST00000549347 NCOA2Q15596 1464 aa27.84■■■□□ 2.05
RAPGEF3-220ENST00000549347 RICTORQ6R327 1708 aa27.83■■■□□ 2.05
RAPGEF3-220ENST00000549347 ADGRL1O94910 1474 aa27.81■■■□□ 2.04
RAPGEF3-220ENST00000549347 EFCAB2Q5VUJ9 269 aa27.8■■■□□ 2.04
RAPGEF3-220ENST00000549347 CCNB3Q8WWL7 1395 aa27.8■■■□□ 2.04
RAPGEF3-220ENST00000549347 ABCC1P33527 1531 aa27.79■■■□□ 2.04
RAPGEF3-220ENST00000549347 APLP2Q06481 763 aa27.79■■■□□ 2.04
RAPGEF3-220ENST00000549347 KANK4Q5T7N3 995 aaPredicted RBP27.79■■■□□ 2.04
RAPGEF3-220ENST00000549347 DENND4BO75064 1496 aaPredicted RBP27.77■■■□□ 2.04
RAPGEF3-220ENST00000549347 SAMD9LQ8IVG5 1584 aa27.77■■■□□ 2.04
RAPGEF3-220ENST00000549347 POGZQ7Z3K3 1410 aa27.74■■■□□ 2.03
RAPGEF3-220ENST00000549347 ZMYM4Q5VZL5 1548 aa27.73■■■□□ 2.03
RAPGEF3-220ENST00000549347 SCAPERQ9BY12 1400 aa27.72■■■□□ 2.03
RAPGEF3-220ENST00000549347 KDM5CP41229 1560 aa27.68■■■□□ 2.02
RAPGEF3-220ENST00000549347 RAPGEF3O95398 923 aa27.67■■■□□ 2.02
RAPGEF3-220ENST00000549347 CFDP1Q9UEE9 299 aaPredicted RBP27.67■■■□□ 2.02
RAPGEF3-220ENST00000549347 ZNF518AQ6AHZ1 1483 aa27.67■■■□□ 2.02
RAPGEF3-220ENST00000549347 PLEKHH2Q8IVE3 1493 aa27.67■■■□□ 2.02
RAPGEF3-220ENST00000549347 SYCP2Q9BX26 1530 aa27.67■■■□□ 2.02
RAPGEF3-220ENST00000549347 ARHGEF12Q9NZN5 1544 aa27.67■■■□□ 2.02
RAPGEF3-220ENST00000549347 ARHGEF40Q8TER5 1519 aa27.64■■■□□ 2.02
RAPGEF3-220ENST00000549347 MYOM3Q5VTT5 1437 aa27.64■■■□□ 2.02
RAPGEF3-220ENST00000549347 KIAA1107Q9UPP5 1409 aa27.64■■■□□ 2.02
RAPGEF3-220ENST00000549347 MAGI2Q86UL8 1455 aa27.61■■■□□ 2.01
RAPGEF3-220ENST00000549347 CAMSAP2Q08AD1 1489 aa27.6■■■□□ 2.01
RAPGEF3-220ENST00000549347 HECW2Q9P2P5 1572 aa27.6■■■□□ 2.01
RAPGEF3-220ENST00000549347 MIA2Q96PC5 1412 aa27.59■■■□□ 2.01
RAPGEF3-220ENST00000549347 TRAPPC8Q9Y2L5 1435 aa27.59■■■□□ 2.01
RAPGEF3-220ENST00000549347 ZNF777Q9ULD5 760 aaPredicted RBP27.59■■■□□ 2.01
RAPGEF3-220ENST00000549347 ZFYVE16Q7Z3T8 1539 aa27.57■■■□□ 2
RAPGEF3-220ENST00000549347 MBD5Q9P267 1494 aa27.54■■■□□ 2
RAPGEF3-220ENST00000549347 MLH3Q9UHC1 1453 aa27.53■■■□□ 2
RAPGEF3-220ENST00000549347 ZNF644Q9H582 1327 aaPredicted RBP27.53■■■□□ 2
RAPGEF3-220ENST00000549347 PTPN23Q9H3S7 1636 aa27.52■■■□□ 2
RAPGEF3-220ENST00000549347 ARHGEF5Q12774 1597 aa27.52■■■□□ 2
RAPGEF3-220ENST00000549347 AFAP1Q8N556 730 aa27.51■■□□□ 1.99
RAPGEF3-220ENST00000549347 INO80Q9ULG1 1556 aaPredicted RBP27.51■■□□□ 1.99
RAPGEF3-220ENST00000549347 YEATS2Q9ULM3 1422 aa27.5■■□□□ 1.99
RAPGEF3-220ENST00000549347 KIDINS220Q9ULH0 1771 aa27.5■■□□□ 1.99
RAPGEF3-220ENST00000549347 FGD6Q6ZV73 1430 aa27.5■■□□□ 1.99
RAPGEF3-220ENST00000549347 ABCA6Q8N139 1617 aa27.49■■□□□ 1.99
RAPGEF3-220ENST00000549347 HNRNPMP52272 730 aaKnown RBP eCLIP27.48■■□□□ 1.99
RAPGEF3-220ENST00000549347 DIP2CQ9Y2E4 1556 aa27.48■■□□□ 1.99
RAPGEF3-220ENST00000549347 TCOF1Q13428 1488 aaKnown RBP27.47■■□□□ 1.99
RAPGEF3-220ENST00000549347 CCDC141Q6ZP82 1450 aa27.47■■□□□ 1.99
RAPGEF3-220ENST00000549347 ATP7AQ04656 1500 aa27.45■■□□□ 1.98
RAPGEF3-220ENST00000549347 REREQ9P2R6 1566 aa27.43■■□□□ 1.98
RAPGEF3-220ENST00000549347 SIGLEC1Q9BZZ2 1709 aa27.43■■□□□ 1.98
RAPGEF3-220ENST00000549347 CROCC2H7BZ55 1655 aa27.41■■□□□ 1.98
RAPGEF3-220ENST00000549347 ATP10AO60312 1499 aa27.41■■□□□ 1.98
RAPGEF3-220ENST00000549347 C9orf84Q5VXU9 1444 aa27.41■■□□□ 1.98
RAPGEF3-220ENST00000549347 MAST1Q9Y2H9 1570 aa27.39■■□□□ 1.97
RAPGEF3-220ENST00000549347 SPAG9O60271 1321 aaKnown RBP27.39■■□□□ 1.97
RAPGEF3-220ENST00000549347 RSPH4AQ5TD94 716 aa27.38■■□□□ 1.97
RAPGEF3-220ENST00000549347 DNMT1P26358 1616 aaKnown RBP27.38■■□□□ 1.97
RAPGEF3-220ENST00000549347 RTEL1-TNFRSF6BF6WH68 1400 aa27.37■■□□□ 1.97
RAPGEF3-220ENST00000549347 ADGBQ8N7X0 1667 aa27.35■■□□□ 1.97
RAPGEF3-220ENST00000549347 BCORL1Q5H9F3 1711 aa27.34■■□□□ 1.97
RAPGEF3-220ENST00000549347 PPARGC1BQ86YN6 1023 aaKnown RBP27.34■■□□□ 1.97
RAPGEF3-220ENST00000549347 SHANK2Q9UPX8 1470 aa27.32■■□□□ 1.96
RAPGEF3-220ENST00000549347 PLXNC1O60486 1568 aa27.32■■□□□ 1.96
RAPGEF3-220ENST00000549347 MYT1LQ9UL68 1186 aa27.32■■□□□ 1.96
RAPGEF3-220ENST00000549347 AGLP35573 1532 aa27.3■■□□□ 1.96
RAPGEF3-220ENST00000549347 ABCC5O15440 1437 aa27.29■■□□□ 1.96
RAPGEF3-220ENST00000549347 DAPK1P53355 1430 aa27.29■■□□□ 1.96
RAPGEF3-220ENST00000549347 ADAMTSL3P82987 1691 aa27.29■■□□□ 1.96
RAPGEF3-220ENST00000549347 A2MP01023 1474 aa27.25■■□□□ 1.95
RAPGEF3-220ENST00000549347 KDM4FA0A1W2PPD8 638 aa27.24■■□□□ 1.95
RAPGEF3-220ENST00000549347 RRBP1Q9P2E9 1410 aaKnown RBP27.24■■□□□ 1.95
RAPGEF3-220ENST00000549347 TSPY4P0CV99 314 aa27.23■■□□□ 1.95
RAPGEF3-220ENST00000549347 TSPY10P0CW01 314 aa27.23■■□□□ 1.95
RAPGEF3-220ENST00000549347 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP27.22■■□□□ 1.95
RAPGEF3-220ENST00000549347 ARID4BQ4LE39 1312 aaPredicted RBP27.21■■□□□ 1.95
RAPGEF3-220ENST00000549347 MADDQ8WXG6 1647 aa27.2■■□□□ 1.95
RAPGEF3-220ENST00000549347 FAM50AQ14320 339 aaKnown RBP27.19■■□□□ 1.94
RAPGEF3-220ENST00000549347 FER1L4A9Z1Z3 1794 aa27.17■■□□□ 1.94
RAPGEF3-220ENST00000549347 ADGRL2O95490 1459 aa27.16■■□□□ 1.94
RAPGEF3-220ENST00000549347 DHX29Q7Z478 1369 aaKnown RBP27.15■■□□□ 1.94
RAPGEF3-220ENST00000549347 EIF2AK4Q9P2K8 1649 aaKnown RBP27.14■■□□□ 1.94
RAPGEF3-220ENST00000549347 DUOX2Q9NRD8 1548 aa27.12■■□□□ 1.93
RAPGEF3-220ENST00000549347 RIMS1Q86UR5 1692 aaKnown RBP27.12■■□□□ 1.93
RAPGEF3-220ENST00000549347 KIF15Q9NS87 1388 aa27.09■■□□□ 1.93
RAPGEF3-220ENST00000549347 PTPRKQ15262 1439 aa27.08■■□□□ 1.93
RAPGEF3-220ENST00000549347 ANKRD30AQ9BXX3 1397 aa27.08■■□□□ 1.93
RAPGEF3-220ENST00000549347 NCOA1Q15788 1441 aa27.07■■□□□ 1.92
RAPGEF3-220ENST00000549347 RNF17Q9BXT8 1623 aaKnown RBP27.07■■□□□ 1.92
RAPGEF3-220ENST00000549347 MLECQ14165 292 aa27.06■■□□□ 1.92
RAPGEF3-220ENST00000549347 ERBINQ96RT1 1412 aa27.05■■□□□ 1.92
RAPGEF3-220ENST00000549347 PTPRMP28827 1452 aa27.05■■□□□ 1.92
RAPGEF3-220ENST00000549347 FAM135AQ9P2D6 1515 aa27.02■■□□□ 1.92
RAPGEF3-220ENST00000549347 ROCK1Q13464 1354 aa27.02■■□□□ 1.92
RAPGEF3-220ENST00000549347 MROH2AA6NES4 1674 aa27.01■■□□□ 1.92
RAPGEF3-220ENST00000549347 CHIC2Q9UKJ5 165 aa27.01■■□□□ 1.91
RAPGEF3-220ENST00000549347 MROH1Q8NDA8 1641 aa26.99■■□□□ 1.91
RAPGEF3-220ENST00000549347 RRP7BPQ9NSQ0 103 aa26.99■■□□□ 1.91
RAPGEF3-220ENST00000549347 CNTLNQ9NXG0 1405 aa26.99■■□□□ 1.91
Retrieved 100 of 20,778 RNA–protein pairs in 116.7 ms