RNA–Protein interactions for RNA: ENST00000549279.1

TPCN1-212, Transcript of two pore segment channel 1, humanhuman

TSL 4

Gene TPCN1, Length 544 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPCN1-212ENST00000549279 VPS8Q8N3P4 1428 aa32.07■■■□□ 2.72
TPCN1-212ENST00000549279 PREX2Q70Z35 1606 aa32.06■■■□□ 2.72
TPCN1-212ENST00000549279 SCAPERQ9BY12 1400 aa32.06■■■□□ 2.72
TPCN1-212ENST00000549279 CDC42BPBQ9Y5S2 1711 aa32.05■■■□□ 2.72
TPCN1-212ENST00000549279 POGZQ7Z3K3 1410 aa32■■■□□ 2.71
TPCN1-212ENST00000549279 ZMYM4Q5VZL5 1548 aa32■■■□□ 2.71
TPCN1-212ENST00000549279 EHBP1L1Q8N3D4 1523 aa32■■■□□ 2.71
TPCN1-212ENST00000549279 CDC42BPAQ5VT25 1732 aa32■■■□□ 2.71
TPCN1-212ENST00000549279 ARHGEF40Q8TER5 1519 aa31.96■■■□□ 2.71
TPCN1-212ENST00000549279 MAGI2Q86UL8 1455 aa31.96■■■□□ 2.71
TPCN1-212ENST00000549279 ZNF518AQ6AHZ1 1483 aa31.93■■■□□ 2.7
TPCN1-212ENST00000549279 GPATCH8Q9UKJ3 1502 aaKnown RBP31.93■■■□□ 2.7
TPCN1-212ENST00000549279 TIAM1Q13009 1591 aa31.93■■■□□ 2.7
TPCN1-212ENST00000549279 CCNB3Q8WWL7 1395 aa31.93■■■□□ 2.7
TPCN1-212ENST00000549279 ZFYVE16Q7Z3T8 1539 aa31.92■■■□□ 2.7
TPCN1-212ENST00000549279 ABCC1P33527 1531 aa31.9■■■□□ 2.7
TPCN1-212ENST00000549279 YEATS2Q9ULM3 1422 aa31.85■■■□□ 2.69
TPCN1-212ENST00000549279 CFDP1Q9UEE9 299 aaPredicted RBP31.85■■■□□ 2.69
TPCN1-212ENST00000549279 ZNF777Q9ULD5 760 aaPredicted RBP31.85■■■□□ 2.69
TPCN1-212ENST00000549279 ITSN2Q9NZM3 1697 aa31.85■■■□□ 2.69
TPCN1-212ENST00000549279 KDM5CP41229 1560 aa31.85■■■□□ 2.69
TPCN1-212ENST00000549279 SUPT6HQ7KZ85 1726 aaKnown RBP31.83■■■□□ 2.69
TPCN1-212ENST00000549279 ARID4BQ4LE39 1312 aaPredicted RBP31.83■■■□□ 2.69
TPCN1-212ENST00000549279 AFAP1Q8N556 730 aa31.83■■■□□ 2.69
TPCN1-212ENST00000549279 MAP3K1Q13233 1512 aa31.83■■■□□ 2.69
TPCN1-212ENST00000549279 SAMD9LQ8IVG5 1584 aa31.81■■■□□ 2.68
TPCN1-212ENST00000549279 ARHGEF12Q9NZN5 1544 aa31.8■■■□□ 2.68
TPCN1-212ENST00000549279 HECW2Q9P2P5 1572 aa31.79■■■□□ 2.68
TPCN1-212ENST00000549279 LRRC9Q6ZRR7 1453 aa31.78■■■□□ 2.68
TPCN1-212ENST00000549279 PLEKHH2Q8IVE3 1493 aa31.78■■■□□ 2.68
TPCN1-212ENST00000549279 TRAPPC8Q9Y2L5 1435 aa31.78■■■□□ 2.68
TPCN1-212ENST00000549279 MYT1LQ9UL68 1186 aa31.78■■■□□ 2.68
TPCN1-212ENST00000549279 NCOA2Q15596 1464 aa31.78■■■□□ 2.68
TPCN1-212ENST00000549279 SYCP2Q9BX26 1530 aa31.75■■■□□ 2.67
TPCN1-212ENST00000549279 BCORL1Q5H9F3 1711 aa31.75■■■□□ 2.67
TPCN1-212ENST00000549279 ATP10AO60312 1499 aa31.75■■■□□ 2.67
TPCN1-212ENST00000549279 MLH3Q9UHC1 1453 aa31.74■■■□□ 2.67
TPCN1-212ENST00000549279 APLP2Q06481 763 aa31.74■■■□□ 2.67
TPCN1-212ENST00000549279 KIAA1107Q9UPP5 1409 aa31.74■■■□□ 2.67
TPCN1-212ENST00000549279 C9orf84Q5VXU9 1444 aa31.73■■■□□ 2.67
TPCN1-212ENST00000549279 ADAMTSL3P82987 1691 aa31.73■■■□□ 2.67
TPCN1-212ENST00000549279 HNRNPMP52272 730 aaKnown RBP eCLIP31.69■■■□□ 2.66
TPCN1-212ENST00000549279 SIGLEC1Q9BZZ2 1709 aa31.67■■■□□ 2.66
TPCN1-212ENST00000549279 KANK4Q5T7N3 995 aaPredicted RBP31.67■■■□□ 2.66
TPCN1-212ENST00000549279 DIP2CQ9Y2E4 1556 aa31.67■■■□□ 2.66
TPCN1-212ENST00000549279 ABCA6Q8N139 1617 aa31.64■■■□□ 2.66
TPCN1-212ENST00000549279 MADDQ8WXG6 1647 aa31.63■■■□□ 2.65
TPCN1-212ENST00000549279 KIDINS220Q9ULH0 1771 aa31.63■■■□□ 2.65
TPCN1-212ENST00000549279 SPAG9O60271 1321 aaKnown RBP31.62■■■□□ 2.65
TPCN1-212ENST00000549279 ZNF644Q9H582 1327 aaPredicted RBP31.62■■■□□ 2.65
TPCN1-212ENST00000549279 REREQ9P2R6 1566 aa31.62■■■□□ 2.65
TPCN1-212ENST00000549279 PTPRMP28827 1452 aa31.59■■■□□ 2.65
TPCN1-212ENST00000549279 MLECQ14165 292 aa31.57■■■□□ 2.64
TPCN1-212ENST00000549279 CAMSAP2Q08AD1 1489 aa31.57■■■□□ 2.64
TPCN1-212ENST00000549279 ATP7AQ04656 1500 aa31.56■■■□□ 2.64
TPCN1-212ENST00000549279 MBD5Q9P267 1494 aa31.56■■■□□ 2.64
TPCN1-212ENST00000549279 INO80Q9ULG1 1556 aaPredicted RBP31.55■■■□□ 2.64
TPCN1-212ENST00000549279 RIMS1Q86UR5 1692 aaKnown RBP31.54■■■□□ 2.64
TPCN1-212ENST00000549279 MYOM3Q5VTT5 1437 aa31.51■■■□□ 2.64
TPCN1-212ENST00000549279 AGLP35573 1532 aa31.51■■■□□ 2.63
TPCN1-212ENST00000549279 RSPH4AQ5TD94 716 aa31.51■■■□□ 2.63
TPCN1-212ENST00000549279 FER1L4A9Z1Z3 1794 aa31.5■■■□□ 2.63
TPCN1-212ENST00000549279 CCDC141Q6ZP82 1450 aa31.49■■■□□ 2.63
TPCN1-212ENST00000549279 MIA2Q96PC5 1412 aa31.49■■■□□ 2.63
TPCN1-212ENST00000549279 RTEL1-TNFRSF6BF6WH68 1400 aa31.46■■■□□ 2.63
TPCN1-212ENST00000549279 ARHGEF5Q12774 1597 aa31.44■■■□□ 2.62
TPCN1-212ENST00000549279 ADGBQ8N7X0 1667 aa31.41■■■□□ 2.62
TPCN1-212ENST00000549279 A2MP01023 1474 aa31.41■■■□□ 2.62
TPCN1-212ENST00000549279 TSPY4P0CV99 314 aa31.38■■■□□ 2.61
TPCN1-212ENST00000549279 TSPY10P0CW01 314 aa31.38■■■□□ 2.61
TPCN1-212ENST00000549279 PLXNC1O60486 1568 aa31.38■■■□□ 2.61
TPCN1-212ENST00000549279 ESF1Q9H501 851 aaKnown RBP31.35■■■□□ 2.61
TPCN1-212ENST00000549279 PLPPR3Q6T4P5 718 aa31.33■■■□□ 2.61
TPCN1-212ENST00000549279 PTPN23Q9H3S7 1636 aa31.31■■■□□ 2.6
TPCN1-212ENST00000549279 FGD6Q6ZV73 1430 aa31.3■■■□□ 2.6
TPCN1-212ENST00000549279 DHX29Q7Z478 1369 aaKnown RBP31.29■■■□□ 2.6
TPCN1-212ENST00000549279 MAST1Q9Y2H9 1570 aa31.28■■■□□ 2.6
TPCN1-212ENST00000549279 CNTLNQ9NXG0 1405 aa31.27■■■□□ 2.6
TPCN1-212ENST00000549279 TCOF1Q13428 1488 aaKnown RBP31.24■■■□□ 2.59
TPCN1-212ENST00000549279 CEBPAP49715 358 aaPredicted RBP31.21■■■□□ 2.59
TPCN1-212ENST00000549279 GGT6Q6P531 493 aa31.21■■■□□ 2.59
TPCN1-212ENST00000549279 C3P01024 1663 aa31.19■■■□□ 2.58
TPCN1-212ENST00000549279 LMTK3Q96Q04 1460 aa31.19■■■□□ 2.58
TPCN1-212ENST00000549279 PPP6R1Q9UPN7 881 aa31.18■■■□□ 2.58
TPCN1-212ENST00000549279 SHANK2Q9UPX8 1470 aa31.18■■■□□ 2.58
TPCN1-212ENST00000549279 MROH2AA6NES4 1674 aa31.18■■■□□ 2.58
TPCN1-212ENST00000549279 CROCC2H7BZ55 1655 aa31.18■■■□□ 2.58
TPCN1-212ENST00000549279 DNMT1P26358 1616 aaKnown RBP31.16■■■□□ 2.58
TPCN1-212ENST00000549279 ABCC5O15440 1437 aa31.16■■■□□ 2.58
TPCN1-212ENST00000549279 KIF3BO15066 747 aa31.15■■■□□ 2.58
TPCN1-212ENST00000549279 DAPK1P53355 1430 aa31.15■■■□□ 2.58
TPCN1-212ENST00000549279 CLTCQ00610 1675 aaKnown RBP31.13■■■□□ 2.57
TPCN1-212ENST00000549279 PREX1Q8TCU6 1659 aa31.13■■■□□ 2.57
TPCN1-212ENST00000549279 ZMYM3Q14202 1370 aa31.1■■■□□ 2.57
TPCN1-212ENST00000549279 FAM50AQ14320 339 aaKnown RBP31.08■■■□□ 2.57
TPCN1-212ENST00000549279 DUOX2Q9NRD8 1548 aa31.08■■■□□ 2.57
TPCN1-212ENST00000549279 FAM135AQ9P2D6 1515 aa31.08■■■□□ 2.57
TPCN1-212ENST00000549279 SETD1BQ9UPS6 1966 aaKnown RBP31.07■■■□□ 2.56
TPCN1-212ENST00000549279 EIF2AK4Q9P2K8 1649 aaKnown RBP31.07■■■□□ 2.56
TPCN1-212ENST00000549279 UHRF1BP1Q6BDS2 1440 aa31.06■■■□□ 2.56
Retrieved 100 of 20,778 RNA–protein pairs in 13.5 ms