RNA–Protein interactions for RNA: ENST00000549274.1

SMARCD1-206, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 1, humanhuman

TSL 3

Gene SMARCD1, Length 611 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD1-206ENST00000549274 MIA2Q96PC5 1412 aa15.02■□□□□ -0
SMARCD1-206ENST00000549274 PHLDB1Q86UU1 1377 aa15.02■□□□□ -0
SMARCD1-206ENST00000549274 PLCH2O75038 1416 aa15.01□□□□□ -0.01
SMARCD1-206ENST00000549274 MYOM3Q5VTT5 1437 aa15.01□□□□□ -0.01
SMARCD1-206ENST00000549274 TRHP20396 242 aaPredicted RBP15□□□□□ -0.01
SMARCD1-206ENST00000549274 ARHGAP5Q13017 1502 aa14.99□□□□□ -0.01
SMARCD1-206ENST00000549274 GPATCH8Q9UKJ3 1502 aaKnown RBP14.99□□□□□ -0.01
SMARCD1-206ENST00000549274 EFCAB2Q5VUJ9 269 aa14.99□□□□□ -0.01
SMARCD1-206ENST00000549274 PLEKHH2Q8IVE3 1493 aa14.99□□□□□ -0.01
SMARCD1-206ENST00000549274 CDC42BPBQ9Y5S2 1711 aa14.98□□□□□ -0.01
SMARCD1-206ENST00000549274 NEO1Q92859 1461 aa14.98□□□□□ -0.01
SMARCD1-206ENST00000549274 CFDP1Q9UEE9 299 aaPredicted RBP14.97□□□□□ -0.01
SMARCD1-206ENST00000549274 FANCAO15360 1455 aa14.96□□□□□ -0.01
SMARCD1-206ENST00000549274 TSPOAP1O95153 1857 aa14.96□□□□□ -0.01
SMARCD1-206ENST00000549274 FGD6Q6ZV73 1430 aa14.95□□□□□ -0.02
SMARCD1-206ENST00000549274 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP14.94□□□□□ -0.02
SMARCD1-206ENST00000549274 PTPN23Q9H3S7 1636 aa14.92□□□□□ -0.02
SMARCD1-206ENST00000549274 RSPH4AQ5TD94 716 aa14.92□□□□□ -0.02
SMARCD1-206ENST00000549274 PPRC1Q5VV67 1664 aaKnown RBP14.92□□□□□ -0.02
SMARCD1-206ENST00000549274 KIAA1107Q9UPP5 1409 aa14.92□□□□□ -0.02
SMARCD1-206ENST00000549274 TCOF1Q13428 1488 aaKnown RBP14.91□□□□□ -0.02
SMARCD1-206ENST00000549274 RRBP1Q9P2E9 1410 aaKnown RBP14.91□□□□□ -0.02
SMARCD1-206ENST00000549274 PLPPR3Q6T4P5 718 aa14.9□□□□□ -0.02
SMARCD1-206ENST00000549274 PIAS4Q8N2W9 510 aaPredicted RBP14.9□□□□□ -0.02
SMARCD1-206ENST00000549274 AKNAQ7Z591 1439 aa14.9□□□□□ -0.02
SMARCD1-206ENST00000549274 CAMSAP2Q08AD1 1489 aa14.89□□□□□ -0.03
SMARCD1-206ENST00000549274 ABCC1P33527 1531 aa14.89□□□□□ -0.03
SMARCD1-206ENST00000549274 PPARGC1BQ86YN6 1023 aaKnown RBP14.89□□□□□ -0.03
SMARCD1-206ENST00000549274 ADGRL1O94910 1474 aa14.89□□□□□ -0.03
SMARCD1-206ENST00000549274 ARHGEF5Q12774 1597 aa14.88□□□□□ -0.03
SMARCD1-206ENST00000549274 SAMD9LQ8IVG5 1584 aa14.88□□□□□ -0.03
SMARCD1-206ENST00000549274 ZNF777Q9ULD5 760 aaPredicted RBP14.86□□□□□ -0.03
SMARCD1-206ENST00000549274 ZNF518AQ6AHZ1 1483 aa14.86□□□□□ -0.03
SMARCD1-206ENST00000549274 DENND4BO75064 1496 aaPredicted RBP14.85□□□□□ -0.03
SMARCD1-206ENST00000549274 SYCP2Q9BX26 1530 aa14.84□□□□□ -0.03
SMARCD1-206ENST00000549274 SCAPERQ9BY12 1400 aa14.83□□□□□ -0.03
SMARCD1-206ENST00000549274 CCDC141Q6ZP82 1450 aa14.83□□□□□ -0.03
SMARCD1-206ENST00000549274 FAM50AQ14320 339 aaKnown RBP14.83□□□□□ -0.04
SMARCD1-206ENST00000549274 DNMT1P26358 1616 aaKnown RBP14.83□□□□□ -0.04
SMARCD1-206ENST00000549274 SHANK2Q9UPX8 1470 aa14.82□□□□□ -0.04
SMARCD1-206ENST00000549274 CROCC2H7BZ55 1655 aa14.81□□□□□ -0.04
SMARCD1-206ENST00000549274 TSPY4P0CV99 314 aa14.81□□□□□ -0.04
SMARCD1-206ENST00000549274 TSPY10P0CW01 314 aa14.81□□□□□ -0.04
SMARCD1-206ENST00000549274 POGZQ7Z3K3 1410 aa14.81□□□□□ -0.04
SMARCD1-206ENST00000549274 KDM6BO15054 1643 aa14.81□□□□□ -0.04
SMARCD1-206ENST00000549274 RICTORQ6R327 1708 aa14.8□□□□□ -0.04
SMARCD1-206ENST00000549274 MAGI2Q86UL8 1455 aa14.8□□□□□ -0.04
SMARCD1-206ENST00000549274 KDM5CP41229 1560 aa14.79□□□□□ -0.04
SMARCD1-206ENST00000549274 ZMYM4Q5VZL5 1548 aa14.79□□□□□ -0.04
SMARCD1-206ENST00000549274 MBD5Q9P267 1494 aa14.79□□□□□ -0.04
SMARCD1-206ENST00000549274 MAST1Q9Y2H9 1570 aa14.79□□□□□ -0.04
SMARCD1-206ENST00000549274 RTEL1-TNFRSF6BF6WH68 1400 aa14.78□□□□□ -0.04
SMARCD1-206ENST00000549274 DAPK1P53355 1430 aa14.78□□□□□ -0.04
SMARCD1-206ENST00000549274 TRIM26Q12899 539 aaPredicted RBP14.78□□□□□ -0.04
SMARCD1-206ENST00000549274 ADGBQ8N7X0 1667 aa14.77□□□□□ -0.04
SMARCD1-206ENST00000549274 HECW2Q9P2P5 1572 aa14.77□□□□□ -0.04
SMARCD1-206ENST00000549274 ZNF644Q9H582 1327 aaPredicted RBP14.77□□□□□ -0.04
SMARCD1-206ENST00000549274 HNRNPMP52272 730 aaKnown RBP eCLIP14.76□□□□□ -0.05
SMARCD1-206ENST00000549274 MLH3Q9UHC1 1453 aa14.76□□□□□ -0.05
SMARCD1-206ENST00000549274 SPAG9O60271 1321 aaKnown RBP14.75□□□□□ -0.05
SMARCD1-206ENST00000549274 ARHGEF12Q9NZN5 1544 aa14.75□□□□□ -0.05
SMARCD1-206ENST00000549274 ABCC5O15440 1437 aa14.75□□□□□ -0.05
SMARCD1-206ENST00000549274 C9orf84Q5VXU9 1444 aa14.75□□□□□ -0.05
SMARCD1-206ENST00000549274 TRAPPC8Q9Y2L5 1435 aa14.75□□□□□ -0.05
SMARCD1-206ENST00000549274 ROCK1Q13464 1354 aa14.73□□□□□ -0.05
SMARCD1-206ENST00000549274 ANKRD30AQ9BXX3 1397 aa14.73□□□□□ -0.05
SMARCD1-206ENST00000549274 PLXNC1O60486 1568 aa14.73□□□□□ -0.05
SMARCD1-206ENST00000549274 INO80Q9ULG1 1556 aaPredicted RBP14.73□□□□□ -0.05
SMARCD1-206ENST00000549274 ACIN1Q9UKV3 1341 aaKnown RBP14.73□□□□□ -0.05
SMARCD1-206ENST00000549274 ATP7AQ04656 1500 aa14.73□□□□□ -0.05
SMARCD1-206ENST00000549274 ADGRL2O95490 1459 aa14.73□□□□□ -0.05
SMARCD1-206ENST00000549274 FRMPD1Q5SYB0 1578 aa14.73□□□□□ -0.05
SMARCD1-206ENST00000549274 ZFYVE16Q7Z3T8 1539 aa14.71□□□□□ -0.05
SMARCD1-206ENST00000549274 MYT1LQ9UL68 1186 aa14.71□□□□□ -0.05
SMARCD1-206ENST00000549274 AFAP1Q8N556 730 aa14.7□□□□□ -0.06
SMARCD1-206ENST00000549274 KIDINS220Q9ULH0 1771 aa14.7□□□□□ -0.06
SMARCD1-206ENST00000549274 RAPGEF3O95398 923 aa14.69□□□□□ -0.06
SMARCD1-206ENST00000549274 ARHGEF40Q8TER5 1519 aa14.68□□□□□ -0.06
SMARCD1-206ENST00000549274 COL17A1Q9UMD9 1497 aaPredicted RBP14.67□□□□□ -0.06
SMARCD1-206ENST00000549274 REREQ9P2R6 1566 aa14.67□□□□□ -0.06
SMARCD1-206ENST00000549274 NCOA1Q15788 1441 aa14.66□□□□□ -0.06
SMARCD1-206ENST00000549274 DUOX2Q9NRD8 1548 aa14.66□□□□□ -0.06
SMARCD1-206ENST00000549274 ITGAEP38570 1179 aa14.66□□□□□ -0.06
SMARCD1-206ENST00000549274 GCC2Q8IWJ2 1684 aa14.65□□□□□ -0.06
SMARCD1-206ENST00000549274 KIF15Q9NS87 1388 aa14.65□□□□□ -0.06
SMARCD1-206ENST00000549274 HFM1A2PYH4 1435 aa14.65□□□□□ -0.06
SMARCD1-206ENST00000549274 ERBINQ96RT1 1412 aa14.65□□□□□ -0.06
SMARCD1-206ENST00000549274 ATP10AO60312 1499 aa14.64□□□□□ -0.07
SMARCD1-206ENST00000549274 EIF2AK4Q9P2K8 1649 aaKnown RBP14.64□□□□□ -0.07
SMARCD1-206ENST00000549274 DIP2CQ9Y2E4 1556 aa14.64□□□□□ -0.07
SMARCD1-206ENST00000549274 ABCA6Q8N139 1617 aa14.63□□□□□ -0.07
SMARCD1-206ENST00000549274 A2MP01023 1474 aa14.63□□□□□ -0.07
SMARCD1-206ENST00000549274 PTPRKQ15262 1439 aa14.62□□□□□ -0.07
SMARCD1-206ENST00000549274 CHIC2Q9UKJ5 165 aa14.62□□□□□ -0.07
SMARCD1-206ENST00000549274 DHX29Q7Z478 1369 aaKnown RBP14.61□□□□□ -0.07
SMARCD1-206ENST00000549274 BCORL1Q5H9F3 1711 aa14.61□□□□□ -0.07
SMARCD1-206ENST00000549274 AGLP35573 1532 aa14.6□□□□□ -0.07
SMARCD1-206ENST00000549274 ANKRD50Q9ULJ7 1429 aa14.59□□□□□ -0.07
SMARCD1-206ENST00000549274 YEATS2Q9ULM3 1422 aa14.59□□□□□ -0.07
SMARCD1-206ENST00000549274 RRP7BPQ9NSQ0 103 aa14.59□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 79.7 ms