RNA–Protein interactions for RNA: ENST00000549102.1

NR4A1-212, Transcript of nuclear receptor subfamily 4 group A member 1, humanhuman

TSL 1 (best)

Gene NR4A1, Length 600 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NR4A1-212ENST00000549102 SCAPERQ9BY12 1400 aa24.2■■□□□ 1.46
NR4A1-212ENST00000549102 PREX2Q70Z35 1606 aa24.2■■□□□ 1.46
NR4A1-212ENST00000549102 ZMYM4Q5VZL5 1548 aa24.2■■□□□ 1.46
NR4A1-212ENST00000549102 ARHGEF40Q8TER5 1519 aa24.18■■□□□ 1.46
NR4A1-212ENST00000549102 POGZQ7Z3K3 1410 aa24.18■■□□□ 1.46
NR4A1-212ENST00000549102 CDC42BPAQ5VT25 1732 aa24.16■■□□□ 1.46
NR4A1-212ENST00000549102 MTUS2Q5JR59 1369 aa24.13■■□□□ 1.45
NR4A1-212ENST00000549102 ZFYVE16Q7Z3T8 1539 aa24.12■■□□□ 1.45
NR4A1-212ENST00000549102 MAGI2Q86UL8 1455 aa24.12■■□□□ 1.45
NR4A1-212ENST00000549102 EHBP1L1Q8N3D4 1523 aa24.09■■□□□ 1.45
NR4A1-212ENST00000549102 YEATS2Q9ULM3 1422 aa24.09■■□□□ 1.45
NR4A1-212ENST00000549102 ZNF518AQ6AHZ1 1483 aa24.08■■□□□ 1.45
NR4A1-212ENST00000549102 VPS8Q8N3P4 1428 aa24.08■■□□□ 1.44
NR4A1-212ENST00000549102 ABCC1P33527 1531 aa24.07■■□□□ 1.44
NR4A1-212ENST00000549102 GPATCH8Q9UKJ3 1502 aaKnown RBP24.07■■□□□ 1.44
NR4A1-212ENST00000549102 KDM5CP41229 1560 aa24.06■■□□□ 1.44
NR4A1-212ENST00000549102 ARID4BQ4LE39 1312 aaPredicted RBP24.06■■□□□ 1.44
NR4A1-212ENST00000549102 ITSN2Q9NZM3 1697 aa24.05■■□□□ 1.44
NR4A1-212ENST00000549102 BCORL1Q5H9F3 1711 aa24.05■■□□□ 1.44
NR4A1-212ENST00000549102 ADAMTSL3P82987 1691 aa24.05■■□□□ 1.44
NR4A1-212ENST00000549102 ARHGEF12Q9NZN5 1544 aa24.03■■□□□ 1.44
NR4A1-212ENST00000549102 CCNB3Q8WWL7 1395 aa24.03■■□□□ 1.44
NR4A1-212ENST00000549102 AFAP1Q8N556 730 aa24.02■■□□□ 1.44
NR4A1-212ENST00000549102 TIAM1Q13009 1591 aa24.02■■□□□ 1.44
NR4A1-212ENST00000549102 SAMD9LQ8IVG5 1584 aa24.01■■□□□ 1.43
NR4A1-212ENST00000549102 HECW2Q9P2P5 1572 aa24.01■■□□□ 1.43
NR4A1-212ENST00000549102 SIGLEC1Q9BZZ2 1709 aa24.01■■□□□ 1.43
NR4A1-212ENST00000549102 ZNF777Q9ULD5 760 aaPredicted RBP24■■□□□ 1.43
NR4A1-212ENST00000549102 TRAPPC8Q9Y2L5 1435 aa24■■□□□ 1.43
NR4A1-212ENST00000549102 CFDP1Q9UEE9 299 aaPredicted RBP23.98■■□□□ 1.43
NR4A1-212ENST00000549102 ATP10AO60312 1499 aa23.98■■□□□ 1.43
NR4A1-212ENST00000549102 SUPT6HQ7KZ85 1726 aaKnown RBP23.97■■□□□ 1.43
NR4A1-212ENST00000549102 MADDQ8WXG6 1647 aa23.96■■□□□ 1.43
NR4A1-212ENST00000549102 SYCP2Q9BX26 1530 aa23.96■■□□□ 1.43
NR4A1-212ENST00000549102 C9orf84Q5VXU9 1444 aa23.96■■□□□ 1.43
NR4A1-212ENST00000549102 MLH3Q9UHC1 1453 aa23.95■■□□□ 1.42
NR4A1-212ENST00000549102 MYT1LQ9UL68 1186 aa23.95■■□□□ 1.42
NR4A1-212ENST00000549102 PLEKHH2Q8IVE3 1493 aa23.94■■□□□ 1.42
NR4A1-212ENST00000549102 DIP2CQ9Y2E4 1556 aa23.93■■□□□ 1.42
NR4A1-212ENST00000549102 PTPRMP28827 1452 aa23.93■■□□□ 1.42
NR4A1-212ENST00000549102 ABCA6Q8N139 1617 aa23.92■■□□□ 1.42
NR4A1-212ENST00000549102 NCOA2Q15596 1464 aa23.92■■□□□ 1.42
NR4A1-212ENST00000549102 KIAA1107Q9UPP5 1409 aa23.92■■□□□ 1.42
NR4A1-212ENST00000549102 MAP3K1Q13233 1512 aa23.91■■□□□ 1.42
NR4A1-212ENST00000549102 RIMS1Q86UR5 1692 aaKnown RBP23.9■■□□□ 1.42
NR4A1-212ENST00000549102 LRRC9Q6ZRR7 1453 aa23.9■■□□□ 1.42
NR4A1-212ENST00000549102 KIDINS220Q9ULH0 1771 aa23.9■■□□□ 1.42
NR4A1-212ENST00000549102 HNRNPMP52272 730 aaKnown RBP eCLIP23.89■■□□□ 1.41
NR4A1-212ENST00000549102 REREQ9P2R6 1566 aa23.88■■□□□ 1.41
NR4A1-212ENST00000549102 MLECQ14165 292 aa23.86■■□□□ 1.41
NR4A1-212ENST00000549102 FER1L4A9Z1Z3 1794 aa23.86■■□□□ 1.41
NR4A1-212ENST00000549102 ZNF644Q9H582 1327 aaPredicted RBP23.84■■□□□ 1.41
NR4A1-212ENST00000549102 SPAG9O60271 1321 aaKnown RBP23.84■■□□□ 1.41
NR4A1-212ENST00000549102 KANK4Q5T7N3 995 aaPredicted RBP23.82■■□□□ 1.4
NR4A1-212ENST00000549102 ATP7AQ04656 1500 aa23.81■■□□□ 1.4
NR4A1-212ENST00000549102 INO80Q9ULG1 1556 aaPredicted RBP23.81■■□□□ 1.4
NR4A1-212ENST00000549102 MBD5Q9P267 1494 aa23.8■■□□□ 1.4
NR4A1-212ENST00000549102 AGLP35573 1532 aa23.79■■□□□ 1.4
NR4A1-212ENST00000549102 CAMSAP2Q08AD1 1489 aa23.79■■□□□ 1.4
NR4A1-212ENST00000549102 APLP2Q06481 763 aa23.78■■□□□ 1.4
NR4A1-212ENST00000549102 PLPPR3Q6T4P5 718 aa23.72■■□□□ 1.39
NR4A1-212ENST00000549102 CCDC141Q6ZP82 1450 aa23.72■■□□□ 1.39
NR4A1-212ENST00000549102 ADGBQ8N7X0 1667 aa23.71■■□□□ 1.39
NR4A1-212ENST00000549102 PLXNC1O60486 1568 aa23.7■■□□□ 1.38
NR4A1-212ENST00000549102 MYOM3Q5VTT5 1437 aa23.7■■□□□ 1.38
NR4A1-212ENST00000549102 ARHGEF5Q12774 1597 aa23.69■■□□□ 1.38
NR4A1-212ENST00000549102 A2MP01023 1474 aa23.69■■□□□ 1.38
NR4A1-212ENST00000549102 RTEL1-TNFRSF6BF6WH68 1400 aa23.69■■□□□ 1.38
NR4A1-212ENST00000549102 RSPH4AQ5TD94 716 aa23.68■■□□□ 1.38
NR4A1-212ENST00000549102 MIA2Q96PC5 1412 aa23.67■■□□□ 1.38
NR4A1-212ENST00000549102 LMTK3Q96Q04 1460 aa23.64■■□□□ 1.38
NR4A1-212ENST00000549102 ESF1Q9H501 851 aaKnown RBP23.63■■□□□ 1.37
NR4A1-212ENST00000549102 CEBPAP49715 358 aaPredicted RBP23.62■■□□□ 1.37
NR4A1-212ENST00000549102 C3P01024 1663 aa23.61■■□□□ 1.37
NR4A1-212ENST00000549102 CNTLNQ9NXG0 1405 aa23.6■■□□□ 1.37
NR4A1-212ENST00000549102 TSPY4P0CV99 314 aa23.59■■□□□ 1.37
NR4A1-212ENST00000549102 TSPY10P0CW01 314 aa23.59■■□□□ 1.37
NR4A1-212ENST00000549102 DHX29Q7Z478 1369 aaKnown RBP23.58■■□□□ 1.37
NR4A1-212ENST00000549102 PREX1Q8TCU6 1659 aa23.57■■□□□ 1.36
NR4A1-212ENST00000549102 MAST1Q9Y2H9 1570 aa23.57■■□□□ 1.36
NR4A1-212ENST00000549102 PTPN23Q9H3S7 1636 aa23.57■■□□□ 1.36
NR4A1-212ENST00000549102 MROH2AA6NES4 1674 aa23.57■■□□□ 1.36
NR4A1-212ENST00000549102 SETD1BQ9UPS6 1966 aaKnown RBP23.55■■□□□ 1.36
NR4A1-212ENST00000549102 CLTCQ00610 1675 aaKnown RBP23.54■■□□□ 1.36
NR4A1-212ENST00000549102 FGD6Q6ZV73 1430 aa23.54■■□□□ 1.36
NR4A1-212ENST00000549102 GGT6Q6P531 493 aa23.54■■□□□ 1.36
NR4A1-212ENST00000549102 CROCC2H7BZ55 1655 aa23.51■■□□□ 1.35
NR4A1-212ENST00000549102 TCOF1Q13428 1488 aaKnown RBP23.5■■□□□ 1.35
NR4A1-212ENST00000549102 HSPA2P54652 639 aa23.5■■□□□ 1.35
NR4A1-212ENST00000549102 KIF3BO15066 747 aa23.49■■□□□ 1.35
NR4A1-212ENST00000549102 PPP6R1Q9UPN7 881 aa23.49■■□□□ 1.35
NR4A1-212ENST00000549102 ZMYM3Q14202 1370 aa23.49■■□□□ 1.35
NR4A1-212ENST00000549102 UHRF1BP1Q6BDS2 1440 aa23.48■■□□□ 1.35
NR4A1-212ENST00000549102 ABCC5O15440 1437 aa23.47■■□□□ 1.35
NR4A1-212ENST00000549102 SHANK2Q9UPX8 1470 aa23.47■■□□□ 1.35
NR4A1-212ENST00000549102 DNMT1P26358 1616 aaKnown RBP23.47■■□□□ 1.35
NR4A1-212ENST00000549102 DAPK1P53355 1430 aa23.44■■□□□ 1.34
NR4A1-212ENST00000549102 NPATQ14207 1427 aa23.44■■□□□ 1.34
NR4A1-212ENST00000549102 FAM135AQ9P2D6 1515 aa23.43■■□□□ 1.34
NR4A1-212ENST00000549102 EIF2AK4Q9P2K8 1649 aaKnown RBP23.42■■□□□ 1.34
Retrieved 100 of 20,778 RNA–protein pairs in 18 ms