RNA–Protein interactions for RNA: ENST00000549100.5

DEPDC4-206, Transcript of DEP domain containing 4, humanhuman

TSL 3

Gene DEPDC4, Length 501 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DEPDC4-206ENST00000549100 KCTD12Q96CX2 325 aaKnown RBP6.45□□□□□ -1.38
DEPDC4-206ENST00000549100 A0A0G2JS52 829 aa6.44□□□□□ -1.38
DEPDC4-206ENST00000549100 HRO43593 1189 aa6.43□□□□□ -1.38
DEPDC4-206ENST00000549100 MICALL2Q8IY33 904 aa6.43□□□□□ -1.38
DEPDC4-206ENST00000549100 IFFO2Q5TF58 517 aa6.42□□□□□ -1.38
DEPDC4-206ENST00000549100 LHX6Q9UPM6 363 aa6.41□□□□□ -1.38
DEPDC4-206ENST00000549100 NUDT7P0C024 238 aa6.4□□□□□ -1.38
DEPDC4-206ENST00000549100 CHRM1P11229 460 aaPredicted RBP6.39□□□□□ -1.39
DEPDC4-206ENST00000549100 PTPN5P54829 565 aa6.39□□□□□ -1.39
DEPDC4-206ENST00000549100 PDAP1Q13442 181 aaKnown RBP6.39□□□□□ -1.39
DEPDC4-206ENST00000549100 DMRTA1Q5VZB9 504 aa6.39□□□□□ -1.39
DEPDC4-206ENST00000549100 ARHGAP33O14559 1287 aa6.35□□□□□ -1.39
DEPDC4-206ENST00000549100 EFCAB3Q8N7B9 438 aa6.35□□□□□ -1.39
DEPDC4-206ENST00000549100 PSEN2P49810 448 aa6.34□□□□□ -1.39
DEPDC4-206ENST00000549100 TK2O00142 265 aa6.32□□□□□ -1.4
DEPDC4-206ENST00000549100 TRAF7Q6Q0C0 670 aa6.32□□□□□ -1.4
DEPDC4-206ENST00000549100 ZNF775Q96BV0 537 aaPredicted RBP6.31□□□□□ -1.4
DEPDC4-206ENST00000549100 MS4A4AQ96JQ5 239 aa6.31□□□□□ -1.4
DEPDC4-206ENST00000549100 GSE1Q14687 1217 aa6.3□□□□□ -1.4
DEPDC4-206ENST00000549100 PCDHGA4Q9Y5G9 962 aa6.27□□□□□ -1.41
DEPDC4-206ENST00000549100 LOC100996750A0A140TA64 210 aa6.26□□□□□ -1.41
DEPDC4-206ENST00000549100 KRTAP4-6Q9BYQ5 205 aa6.26□□□□□ -1.41
DEPDC4-206ENST00000549100 ZNF787Q6DD87 383 aa6.23□□□□□ -1.41
DEPDC4-206ENST00000549100 THSD4Q6ZMP0 1018 aa6.23□□□□□ -1.41
DEPDC4-206ENST00000549100 STAC3Q96MF2 364 aa6.23□□□□□ -1.41
DEPDC4-206ENST00000549100 GFRA3O60609 400 aa6.22□□□□□ -1.41
DEPDC4-206ENST00000549100 KDM4FA0A1W2PPD8 638 aa6.21□□□□□ -1.42
DEPDC4-206ENST00000549100 KIF3CO14782 793 aa6.21□□□□□ -1.42
DEPDC4-206ENST00000549100 C2orf72A6NCS6 295 aa6.19□□□□□ -1.42
DEPDC4-206ENST00000549100 PHF8Q9UPP1 1060 aa6.19□□□□□ -1.42
DEPDC4-206ENST00000549100 VPS9D1Q9Y2B5 631 aa6.19□□□□□ -1.42
DEPDC4-206ENST00000549100 SLC34A2O95436 690 aa6.18□□□□□ -1.42
DEPDC4-206ENST00000549100 LAPTM4AQ15012 233 aa6.18□□□□□ -1.42
DEPDC4-206ENST00000549100 ITGBL1O95965 494 aaPredicted RBP6.15□□□□□ -1.42
DEPDC4-206ENST00000549100 KLHL34Q8N239 644 aa6.15□□□□□ -1.42
DEPDC4-206ENST00000549100 BHMG1C9JSJ3 638 aaPredicted RBP6.14□□□□□ -1.43
DEPDC4-206ENST00000549100 SOX12O15370 315 aa6.14□□□□□ -1.43
DEPDC4-206ENST00000549100 KCNK17Q96T54 332 aa6.14□□□□□ -1.43
DEPDC4-206ENST00000549100 WNT2BQ93097 391 aa6.13□□□□□ -1.43
DEPDC4-206ENST00000549100 PSDA5PKW4 1024 aaPredicted RBP6.12□□□□□ -1.43
DEPDC4-206ENST00000549100 NRG2O14511 850 aaPredicted RBP6.08□□□□□ -1.44
DEPDC4-206ENST00000549100 LCE2AQ5TA79 106 aaPredicted RBP6.08□□□□□ -1.44
DEPDC4-206ENST00000549100 PPP4R3BQ5MIZ7 849 aa6.07□□□□□ -1.44
DEPDC4-206ENST00000549100 CIZ1Q9ULV3 898 aaPredicted RBP6.07□□□□□ -1.44
DEPDC4-206ENST00000549100 POTECB2RU33 542 aa6.06□□□□□ -1.44
DEPDC4-206ENST00000549100 GOLGA8CPA6NN73 597 aa6.05□□□□□ -1.44
DEPDC4-206ENST00000549100 FBXO22Q8NEZ5 403 aa6.05□□□□□ -1.44
DEPDC4-206ENST00000549100 SLC4A5Q9BY07 1137 aa6.04□□□□□ -1.44
DEPDC4-206ENST00000549100 MRPL50Q8N5N7 158 aaKnown RBP6.03□□□□□ -1.44
DEPDC4-206ENST00000549100 PTCD2Q8WV60 388 aaKnown RBP6.03□□□□□ -1.44
DEPDC4-206ENST00000549100 KCNC4Q03721 635 aa6.01□□□□□ -1.45
DEPDC4-206ENST00000549100 PRKD2Q9BZL6 878 aa6.01□□□□□ -1.45
DEPDC4-206ENST00000549100 TREML4Q6UXN2 200 aa6□□□□□ -1.45
DEPDC4-206ENST00000549100 ZBED2Q9BTP6 218 aa6□□□□□ -1.45
DEPDC4-206ENST00000549100 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP5.99□□□□□ -1.45
DEPDC4-206ENST00000549100 VASPP50552 380 aaPredicted RBP5.99□□□□□ -1.45
DEPDC4-206ENST00000549100 BCAMP50895 628 aa5.99□□□□□ -1.45
DEPDC4-206ENST00000549100 ZFP91Q96JP5 570 aaPredicted RBP5.99□□□□□ -1.45
DEPDC4-206ENST00000549100 NLRP6P59044 892 aa5.98□□□□□ -1.45
DEPDC4-206ENST00000549100 KCNH8Q96L42 1107 aa5.97□□□□□ -1.45
DEPDC4-206ENST00000549100 TMC2Q8TDI7 906 aa5.96□□□□□ -1.46
DEPDC4-206ENST00000549100 RNF25Q96BH1 459 aaPredicted RBP5.96□□□□□ -1.46
DEPDC4-206ENST00000549100 BCL2L12Q9HB09 334 aa5.96□□□□□ -1.46
DEPDC4-206ENST00000549100 WBP1LQ9NX94 342 aa5.96□□□□□ -1.46
DEPDC4-206ENST00000549100 FKBP8Q14318 412 aa5.95□□□□□ -1.46
DEPDC4-206ENST00000549100 MFRPQ9BY79 579 aa5.95□□□□□ -1.46
DEPDC4-206ENST00000549100 PDZRN3Q9UPQ7 1066 aa5.95□□□□□ -1.46
DEPDC4-206ENST00000549100 FBXO3Q9UK99 471 aa5.93□□□□□ -1.46
DEPDC4-206ENST00000549100 ZNF454Q8N9F8 522 aa5.92□□□□□ -1.46
DEPDC4-206ENST00000549100 SPOCK2Q92563 424 aa5.92□□□□□ -1.46
DEPDC4-206ENST00000549100 ANKK1Q8NFD2 765 aa5.91□□□□□ -1.46
DEPDC4-206ENST00000549100 NBPF3Q9H094 633 aa5.91□□□□□ -1.46
DEPDC4-206ENST00000549100 STK17AQ9UEE5 414 aa5.91□□□□□ -1.46
DEPDC4-206ENST00000549100 SOWAHBA6NEL2 793 aa5.9□□□□□ -1.46
DEPDC4-206ENST00000549100 IFNLR1Q8IU57 520 aaPredicted RBP5.9□□□□□ -1.46
DEPDC4-206ENST00000549100 PTPREP23469 700 aa5.89□□□□□ -1.47
DEPDC4-206ENST00000549100 MYT1Q01538 1121 aa5.89□□□□□ -1.47
DEPDC4-206ENST00000549100 SUZ12Q15022 739 aaKnown RBP5.89□□□□□ -1.47
DEPDC4-206ENST00000549100 PLPP6Q8IY26 295 aa5.89□□□□□ -1.47
DEPDC4-206ENST00000549100 V9GY48 417 aaPredicted RBP5.89□□□□□ -1.47
DEPDC4-206ENST00000549100 RIOK3O14730 519 aaKnown RBP5.88□□□□□ -1.47
DEPDC4-206ENST00000549100 PPP1R18Q6NYC8 613 aa5.87□□□□□ -1.47
DEPDC4-206ENST00000549100 FOSBP53539 338 aa5.86□□□□□ -1.47
DEPDC4-206ENST00000549100 PROX2Q3B8N5 592 aa5.86□□□□□ -1.47
DEPDC4-206ENST00000549100 TRIM67Q6ZTA4 783 aa5.86□□□□□ -1.47
DEPDC4-206ENST00000549100 NYAP1Q6ZVC0 841 aa5.86□□□□□ -1.47
DEPDC4-206ENST00000549100 VGFO15240 615 aaPredicted RBP5.85□□□□□ -1.47
DEPDC4-206ENST00000549100 ADAM33Q9BZ11 813 aa5.85□□□□□ -1.47
DEPDC4-206ENST00000549100 PPP1R37O75864 691 aa5.84□□□□□ -1.47
DEPDC4-206ENST00000549100 FOXK1P85037 733 aa5.84□□□□□ -1.47
DEPDC4-206ENST00000549100 ZFRQ96KR1 1074 aaKnown RBP5.84□□□□□ -1.47
DEPDC4-206ENST00000549100 TBC1D12O60347 775 aa5.83□□□□□ -1.48
DEPDC4-206ENST00000549100 LCE2CQ5TA81 110 aa5.83□□□□□ -1.48
DEPDC4-206ENST00000549100 RABGEF1Q9UJ41 708 aa5.83□□□□□ -1.48
DEPDC4-206ENST00000549100 DSG2Q14126 1118 aa5.82□□□□□ -1.48
DEPDC4-206ENST00000549100 TJAP1Q5JTD0 557 aa5.82□□□□□ -1.48
DEPDC4-206ENST00000549100 BCL11BQ9C0K0 894 aaPredicted RBP5.82□□□□□ -1.48
DEPDC4-206ENST00000549100 WFS1O76024 890 aa5.81□□□□□ -1.48
DEPDC4-206ENST00000549100 WIPF1O43516 503 aa5.8□□□□□ -1.48
DEPDC4-206ENST00000549100 COL9A1P20849 921 aa5.8□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 49.8 ms