RNA–Protein interactions for RNA: ENST00000549044.5

BRF1-214, Transcript of BRF1, RNA polymerase III transcription initiation factor subunit, humanhuman

TSL 4

Gene BRF1, Length 521 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRF1-214ENST00000549044 CDC42BPBQ9Y5S2 1711 aa29.59■■■□□ 2.33
BRF1-214ENST00000549044 RICTORQ6R327 1708 aa29.59■■■□□ 2.33
BRF1-214ENST00000549044 PREX2Q70Z35 1606 aa29.58■■■□□ 2.33
BRF1-214ENST00000549044 KDM4FA0A1W2PPD8 638 aa29.57■■■□□ 2.32
BRF1-214ENST00000549044 TIAM1Q13009 1591 aa29.56■■■□□ 2.32
BRF1-214ENST00000549044 EHBP1L1Q8N3D4 1523 aa29.55■■■□□ 2.32
BRF1-214ENST00000549044 CDC42BPAQ5VT25 1732 aa29.55■■■□□ 2.32
BRF1-214ENST00000549044 GPATCH8Q9UKJ3 1502 aaKnown RBP29.55■■■□□ 2.32
BRF1-214ENST00000549044 POGZQ7Z3K3 1410 aa29.53■■■□□ 2.32
BRF1-214ENST00000549044 CCNB3Q8WWL7 1395 aa29.49■■■□□ 2.31
BRF1-214ENST00000549044 ZMYM4Q5VZL5 1548 aa29.48■■■□□ 2.31
BRF1-214ENST00000549044 ARHGEF12Q9NZN5 1544 aa29.48■■■□□ 2.31
BRF1-214ENST00000549044 KANK4Q5T7N3 995 aaPredicted RBP29.47■■■□□ 2.31
BRF1-214ENST00000549044 YEATS2Q9ULM3 1422 aa29.45■■■□□ 2.31
BRF1-214ENST00000549044 LRRC9Q6ZRR7 1453 aa29.45■■■□□ 2.31
BRF1-214ENST00000549044 AFAP1Q8N556 730 aa29.45■■■□□ 2.31
BRF1-214ENST00000549044 ZNF777Q9ULD5 760 aaPredicted RBP29.45■■■□□ 2.31
BRF1-214ENST00000549044 ABCC1P33527 1531 aa29.45■■■□□ 2.3
BRF1-214ENST00000549044 MAP3K1Q13233 1512 aa29.43■■■□□ 2.3
BRF1-214ENST00000549044 ARHGEF40Q8TER5 1519 aa29.43■■■□□ 2.3
BRF1-214ENST00000549044 TRAPPC8Q9Y2L5 1435 aa29.43■■■□□ 2.3
BRF1-214ENST00000549044 SAMD9LQ8IVG5 1584 aa29.43■■■□□ 2.3
BRF1-214ENST00000549044 NCOA2Q15596 1464 aa29.42■■■□□ 2.3
BRF1-214ENST00000549044 CFDP1Q9UEE9 299 aaPredicted RBP29.42■■■□□ 2.3
BRF1-214ENST00000549044 ZNF518AQ6AHZ1 1483 aa29.4■■■□□ 2.3
BRF1-214ENST00000549044 ZFYVE16Q7Z3T8 1539 aa29.39■■■□□ 2.3
BRF1-214ENST00000549044 SUPT6HQ7KZ85 1726 aaKnown RBP29.37■■■□□ 2.29
BRF1-214ENST00000549044 MAGI2Q86UL8 1455 aa29.37■■■□□ 2.29
BRF1-214ENST00000549044 KDM5CP41229 1560 aa29.37■■■□□ 2.29
BRF1-214ENST00000549044 ZNF644Q9H582 1327 aaPredicted RBP29.37■■■□□ 2.29
BRF1-214ENST00000549044 ITSN2Q9NZM3 1697 aa29.37■■■□□ 2.29
BRF1-214ENST00000549044 HNRNPMP52272 730 aaKnown RBP eCLIP29.35■■■□□ 2.29
BRF1-214ENST00000549044 SYCP2Q9BX26 1530 aa29.35■■■□□ 2.29
BRF1-214ENST00000549044 SIGLEC1Q9BZZ2 1709 aa29.31■■■□□ 2.28
BRF1-214ENST00000549044 KIAA1107Q9UPP5 1409 aa29.28■■■□□ 2.28
BRF1-214ENST00000549044 ARID4BQ4LE39 1312 aaPredicted RBP29.28■■■□□ 2.28
BRF1-214ENST00000549044 HECW2Q9P2P5 1572 aa29.28■■■□□ 2.28
BRF1-214ENST00000549044 APLP2Q06481 763 aa29.28■■■□□ 2.28
BRF1-214ENST00000549044 MLH3Q9UHC1 1453 aa29.27■■■□□ 2.28
BRF1-214ENST00000549044 ATP10AO60312 1499 aa29.26■■■□□ 2.27
BRF1-214ENST00000549044 PLEKHH2Q8IVE3 1493 aa29.26■■■□□ 2.27
BRF1-214ENST00000549044 MYT1LQ9UL68 1186 aa29.26■■■□□ 2.27
BRF1-214ENST00000549044 DIP2CQ9Y2E4 1556 aa29.23■■■□□ 2.27
BRF1-214ENST00000549044 MBD5Q9P267 1494 aa29.23■■■□□ 2.27
BRF1-214ENST00000549044 ABCA6Q8N139 1617 aa29.22■■■□□ 2.27
BRF1-214ENST00000549044 C9orf84Q5VXU9 1444 aa29.21■■■□□ 2.27
BRF1-214ENST00000549044 BCORL1Q5H9F3 1711 aa29.2■■■□□ 2.27
BRF1-214ENST00000549044 CAMSAP2Q08AD1 1489 aa29.2■■■□□ 2.26
BRF1-214ENST00000549044 ADAMTSL3P82987 1691 aa29.2■■■□□ 2.26
BRF1-214ENST00000549044 KIDINS220Q9ULH0 1771 aa29.2■■■□□ 2.26
BRF1-214ENST00000549044 SPAG9O60271 1321 aaKnown RBP29.19■■■□□ 2.26
BRF1-214ENST00000549044 MYOM3Q5VTT5 1437 aa29.16■■■□□ 2.26
BRF1-214ENST00000549044 MLECQ14165 292 aa29.15■■■□□ 2.26
BRF1-214ENST00000549044 ATP7AQ04656 1500 aa29.12■■■□□ 2.25
BRF1-214ENST00000549044 INO80Q9ULG1 1556 aaPredicted RBP29.12■■■□□ 2.25
BRF1-214ENST00000549044 MADDQ8WXG6 1647 aa29.12■■■□□ 2.25
BRF1-214ENST00000549044 REREQ9P2R6 1566 aa29.1■■■□□ 2.25
BRF1-214ENST00000549044 MIA2Q96PC5 1412 aa29.09■■■□□ 2.25
BRF1-214ENST00000549044 PTPRMP28827 1452 aa29.07■■■□□ 2.24
BRF1-214ENST00000549044 CCDC141Q6ZP82 1450 aa29.07■■■□□ 2.24
BRF1-214ENST00000549044 ARHGEF5Q12774 1597 aa29.04■■■□□ 2.24
BRF1-214ENST00000549044 AGLP35573 1532 aa29.03■■■□□ 2.24
BRF1-214ENST00000549044 RIMS1Q86UR5 1692 aaKnown RBP29.02■■■□□ 2.24
BRF1-214ENST00000549044 RTEL1-TNFRSF6BF6WH68 1400 aa29.01■■■□□ 2.23
BRF1-214ENST00000549044 RSPH4AQ5TD94 716 aa29■■■□□ 2.23
BRF1-214ENST00000549044 FGD6Q6ZV73 1430 aa29■■■□□ 2.23
BRF1-214ENST00000549044 PPARGC1BQ86YN6 1023 aaKnown RBP28.99■■■□□ 2.23
BRF1-214ENST00000549044 A2MP01023 1474 aa28.98■■■□□ 2.23
BRF1-214ENST00000549044 PTPN23Q9H3S7 1636 aa28.98■■■□□ 2.23
BRF1-214ENST00000549044 PLXNC1O60486 1568 aa28.96■■■□□ 2.23
BRF1-214ENST00000549044 FER1L4A9Z1Z3 1794 aa28.94■■■□□ 2.22
BRF1-214ENST00000549044 TCOF1Q13428 1488 aaKnown RBP28.93■■■□□ 2.22
BRF1-214ENST00000549044 PLPPR3Q6T4P5 718 aa28.93■■■□□ 2.22
BRF1-214ENST00000549044 TSPY4P0CV99 314 aa28.92■■■□□ 2.22
BRF1-214ENST00000549044 TSPY10P0CW01 314 aa28.92■■■□□ 2.22
BRF1-214ENST00000549044 ADGBQ8N7X0 1667 aa28.91■■■□□ 2.22
BRF1-214ENST00000549044 DHX29Q7Z478 1369 aaKnown RBP28.89■■■□□ 2.22
BRF1-214ENST00000549044 ABCC5O15440 1437 aa28.89■■■□□ 2.22
BRF1-214ENST00000549044 MAST1Q9Y2H9 1570 aa28.88■■■□□ 2.21
BRF1-214ENST00000549044 CEBPAP49715 358 aaPredicted RBP28.86■■■□□ 2.21
BRF1-214ENST00000549044 DAPK1P53355 1430 aa28.84■■■□□ 2.21
BRF1-214ENST00000549044 GGT6Q6P531 493 aa28.82■■■□□ 2.2
BRF1-214ENST00000549044 DNMT1P26358 1616 aaKnown RBP28.81■■■□□ 2.2
BRF1-214ENST00000549044 FAM50AQ14320 339 aaKnown RBP28.81■■■□□ 2.2
BRF1-214ENST00000549044 CROCC2H7BZ55 1655 aa28.8■■■□□ 2.2
BRF1-214ENST00000549044 KIF3BO15066 747 aa28.79■■■□□ 2.2
BRF1-214ENST00000549044 SHANK2Q9UPX8 1470 aa28.78■■■□□ 2.2
BRF1-214ENST00000549044 ESF1Q9H501 851 aaKnown RBP28.76■■■□□ 2.19
BRF1-214ENST00000549044 CHIC2Q9UKJ5 165 aa28.75■■■□□ 2.19
BRF1-214ENST00000549044 RRP7BPQ9NSQ0 103 aa28.73■■■□□ 2.19
BRF1-214ENST00000549044 CNTLNQ9NXG0 1405 aa28.73■■■□□ 2.19
BRF1-214ENST00000549044 C3P01024 1663 aa28.72■■■□□ 2.19
BRF1-214ENST00000549044 LMTK3Q96Q04 1460 aa28.72■■■□□ 2.19
BRF1-214ENST00000549044 KIF15Q9NS87 1388 aa28.71■■■□□ 2.19
BRF1-214ENST00000549044 CLTCQ00610 1675 aaKnown RBP28.7■■■□□ 2.18
BRF1-214ENST00000549044 ZMYM3Q14202 1370 aa28.69■■■□□ 2.18
BRF1-214ENST00000549044 DUOX2Q9NRD8 1548 aa28.68■■■□□ 2.18
BRF1-214ENST00000549044 PTPRKQ15262 1439 aa28.68■■■□□ 2.18
BRF1-214ENST00000549044 PPP6R1Q9UPN7 881 aa28.66■■■□□ 2.18
BRF1-214ENST00000549044 MROH2AA6NES4 1674 aa28.66■■■□□ 2.18
Retrieved 100 of 20,778 RNA–protein pairs in 50.2 ms