RNA–Protein interactions for RNA: ENST00000548868.5

SCRN3-212, Transcript of secernin 3, humanhuman

TSL 2

Gene SCRN3, Length 1,594 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCRN3-212ENST00000548868 KIF13AQ9H1H9 1805 aa17.29■□□□□ 0.36
SCRN3-212ENST00000548868 CDC42BPBQ9Y5S2 1711 aa17.29■□□□□ 0.36
SCRN3-212ENST00000548868 GPATCH8Q9UKJ3 1502 aaKnown RBP17.29■□□□□ 0.36
SCRN3-212ENST00000548868 ARAP3Q8WWN8 1544 aa17.28■□□□□ 0.36
SCRN3-212ENST00000548868 MAP3K4Q9Y6R4 1608 aa17.28■□□□□ 0.36
SCRN3-212ENST00000548868 MIA2Q96PC5 1412 aa17.27■□□□□ 0.35
SCRN3-212ENST00000548868 FGD6Q6ZV73 1430 aa17.25■□□□□ 0.35
SCRN3-212ENST00000548868 PLCH2O75038 1416 aa17.25■□□□□ 0.35
SCRN3-212ENST00000548868 RRBP1Q9P2E9 1410 aaKnown RBP17.25■□□□□ 0.35
SCRN3-212ENST00000548868 PTPN23Q9H3S7 1636 aa17.24■□□□□ 0.35
SCRN3-212ENST00000548868 CD109Q6YHK3 1445 aa17.22■□□□□ 0.35
SCRN3-212ENST00000548868 ARHGAP5Q13017 1502 aa17.22■□□□□ 0.35
SCRN3-212ENST00000548868 CFAP74Q9C0B2 1584 aa17.22■□□□□ 0.35
SCRN3-212ENST00000548868 FAM69CQ0P6D2 419 aa17.21■□□□□ 0.35
SCRN3-212ENST00000548868 CFDP1Q9UEE9 299 aaPredicted RBP17.21■□□□□ 0.35
SCRN3-212ENST00000548868 TCOF1Q13428 1488 aaKnown RBP17.21■□□□□ 0.35
SCRN3-212ENST00000548868 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP17.2■□□□□ 0.34
SCRN3-212ENST00000548868 TSPOAP1O95153 1857 aa17.18■□□□□ 0.34
SCRN3-212ENST00000548868 TRIM26Q12899 539 aaPredicted RBP17.17■□□□□ 0.34
SCRN3-212ENST00000548868 EFCAB2Q5VUJ9 269 aa17.17■□□□□ 0.34
SCRN3-212ENST00000548868 SAMD9LQ8IVG5 1584 aa17.17■□□□□ 0.34
SCRN3-212ENST00000548868 PPRC1Q5VV67 1664 aaKnown RBP17.17■□□□□ 0.34
SCRN3-212ENST00000548868 FANCAO15360 1455 aa17.17■□□□□ 0.34
SCRN3-212ENST00000548868 CAMSAP2Q08AD1 1489 aa17.17■□□□□ 0.34
SCRN3-212ENST00000548868 PLEKHH2Q8IVE3 1493 aa17.16■□□□□ 0.34
SCRN3-212ENST00000548868 TEX14Q8IWB6 1497 aa17.14■□□□□ 0.34
SCRN3-212ENST00000548868 NEO1Q92859 1461 aa17.14■□□□□ 0.33
SCRN3-212ENST00000548868 ABCC1P33527 1531 aa17.12■□□□□ 0.33
SCRN3-212ENST00000548868 KIAA1107Q9UPP5 1409 aa17.12■□□□□ 0.33
SCRN3-212ENST00000548868 FAM50AQ14320 339 aaKnown RBP17.12■□□□□ 0.33
SCRN3-212ENST00000548868 ZNF777Q9ULD5 760 aaPredicted RBP17.12■□□□□ 0.33
SCRN3-212ENST00000548868 DNMT1P26358 1616 aaKnown RBP17.11■□□□□ 0.33
SCRN3-212ENST00000548868 ARHGEF5Q12774 1597 aa17.11■□□□□ 0.33
SCRN3-212ENST00000548868 AKNAQ7Z591 1439 aa17.1■□□□□ 0.33
SCRN3-212ENST00000548868 ZNF644Q9H582 1327 aaPredicted RBP17.1■□□□□ 0.33
SCRN3-212ENST00000548868 SYCP2Q9BX26 1530 aa17.09■□□□□ 0.33
SCRN3-212ENST00000548868 TRHP20396 242 aaPredicted RBP17.09■□□□□ 0.33
SCRN3-212ENST00000548868 ADGRL1O94910 1474 aa17.09■□□□□ 0.33
SCRN3-212ENST00000548868 CROCC2H7BZ55 1655 aa17.09■□□□□ 0.33
SCRN3-212ENST00000548868 RSPH4AQ5TD94 716 aa17.07■□□□□ 0.32
SCRN3-212ENST00000548868 MBD5Q9P267 1494 aa17.07■□□□□ 0.32
SCRN3-212ENST00000548868 ARHGEF12Q9NZN5 1544 aa17.06■□□□□ 0.32
SCRN3-212ENST00000548868 CCDC141Q6ZP82 1450 aa17.05■□□□□ 0.32
SCRN3-212ENST00000548868 DAPK1P53355 1430 aa17.05■□□□□ 0.32
SCRN3-212ENST00000548868 ABCC5O15440 1437 aa17.04■□□□□ 0.32
SCRN3-212ENST00000548868 SCAPERQ9BY12 1400 aa17.04■□□□□ 0.32
SCRN3-212ENST00000548868 HNRNPMP52272 730 aaKnown RBP eCLIP17.03■□□□□ 0.32
SCRN3-212ENST00000548868 SHANK2Q9UPX8 1470 aa17.03■□□□□ 0.32
SCRN3-212ENST00000548868 ADGBQ8N7X0 1667 aa17.03■□□□□ 0.32
SCRN3-212ENST00000548868 MAST1Q9Y2H9 1570 aa17.02■□□□□ 0.32
SCRN3-212ENST00000548868 RICTORQ6R327 1708 aa17.02■□□□□ 0.31
SCRN3-212ENST00000548868 DENND4BO75064 1496 aaPredicted RBP17■□□□□ 0.31
SCRN3-212ENST00000548868 ZNF518AQ6AHZ1 1483 aa17■□□□□ 0.31
SCRN3-212ENST00000548868 POGZQ7Z3K3 1410 aa17■□□□□ 0.31
SCRN3-212ENST00000548868 TRAPPC8Q9Y2L5 1435 aa17■□□□□ 0.31
SCRN3-212ENST00000548868 KDM5CP41229 1560 aa16.99■□□□□ 0.31
SCRN3-212ENST00000548868 PTPRKQ15262 1439 aa16.99■□□□□ 0.31
SCRN3-212ENST00000548868 TSPY4P0CV99 314 aa16.98■□□□□ 0.31
SCRN3-212ENST00000548868 TSPY10P0CW01 314 aa16.98■□□□□ 0.31
SCRN3-212ENST00000548868 ITGAEP38570 1179 aa16.98■□□□□ 0.31
SCRN3-212ENST00000548868 PCGF6Q9BYE7 350 aa16.98■□□□□ 0.31
SCRN3-212ENST00000548868 C9orf84Q5VXU9 1444 aa16.97■□□□□ 0.31
SCRN3-212ENST00000548868 ADGRL2O95490 1459 aa16.97■□□□□ 0.31
SCRN3-212ENST00000548868 ROCK1Q13464 1354 aa16.96■□□□□ 0.31
SCRN3-212ENST00000548868 FRMPD1Q5SYB0 1578 aa16.95■□□□□ 0.3
SCRN3-212ENST00000548868 INO80Q9ULG1 1556 aaPredicted RBP16.95■□□□□ 0.3
SCRN3-212ENST00000548868 RTEL1-TNFRSF6BF6WH68 1400 aa16.95■□□□□ 0.3
SCRN3-212ENST00000548868 PLXNC1O60486 1568 aa16.95■□□□□ 0.3
SCRN3-212ENST00000548868 ZMYM4Q5VZL5 1548 aa16.94■□□□□ 0.3
SCRN3-212ENST00000548868 HECW2Q9P2P5 1572 aa16.94■□□□□ 0.3
SCRN3-212ENST00000548868 GCC2Q8IWJ2 1684 aa16.94■□□□□ 0.3
SCRN3-212ENST00000548868 AFAP1Q8N556 730 aa16.94■□□□□ 0.3
SCRN3-212ENST00000548868 ATP7AQ04656 1500 aa16.93■□□□□ 0.3
SCRN3-212ENST00000548868 ZFYVE16Q7Z3T8 1539 aa16.93■□□□□ 0.3
SCRN3-212ENST00000548868 SPAG9O60271 1321 aaKnown RBP16.93■□□□□ 0.3
SCRN3-212ENST00000548868 ANKRD30AQ9BXX3 1397 aa16.93■□□□□ 0.3
SCRN3-212ENST00000548868 MLH3Q9UHC1 1453 aa16.93■□□□□ 0.3
SCRN3-212ENST00000548868 KIDINS220Q9ULH0 1771 aa16.93■□□□□ 0.3
SCRN3-212ENST00000548868 KDM6BO15054 1643 aa16.92■□□□□ 0.3
SCRN3-212ENST00000548868 NCOA1Q15788 1441 aa16.91■□□□□ 0.3
SCRN3-212ENST00000548868 CHIC2Q9UKJ5 165 aa16.91■□□□□ 0.3
SCRN3-212ENST00000548868 RAPGEF3O95398 923 aa16.9■□□□□ 0.3
SCRN3-212ENST00000548868 MAGI2Q86UL8 1455 aa16.9■□□□□ 0.3
SCRN3-212ENST00000548868 COL17A1Q9UMD9 1497 aaPredicted RBP16.9■□□□□ 0.3
SCRN3-212ENST00000548868 HFM1A2PYH4 1435 aa16.9■□□□□ 0.3
SCRN3-212ENST00000548868 NAIPQ13075 1403 aa16.87■□□□□ 0.29
SCRN3-212ENST00000548868 SETD5Q9C0A6 1442 aa16.85■□□□□ 0.29
SCRN3-212ENST00000548868 RRP7BPQ9NSQ0 103 aa16.85■□□□□ 0.29
SCRN3-212ENST00000548868 DUOX2Q9NRD8 1548 aa16.85■□□□□ 0.29
SCRN3-212ENST00000548868 KIF15Q9NS87 1388 aa16.85■□□□□ 0.29
SCRN3-212ENST00000548868 ABCA6Q8N139 1617 aa16.85■□□□□ 0.29
SCRN3-212ENST00000548868 MYT1LQ9UL68 1186 aa16.85■□□□□ 0.29
SCRN3-212ENST00000548868 DIP2CQ9Y2E4 1556 aa16.84■□□□□ 0.29
SCRN3-212ENST00000548868 ARHGEF40Q8TER5 1519 aa16.82■□□□□ 0.28
SCRN3-212ENST00000548868 EIF2AK4Q9P2K8 1649 aaKnown RBP16.81■□□□□ 0.28
SCRN3-212ENST00000548868 ERBINQ96RT1 1412 aa16.81■□□□□ 0.28
SCRN3-212ENST00000548868 ANKRD50Q9ULJ7 1429 aa16.8■□□□□ 0.28
SCRN3-212ENST00000548868 REREQ9P2R6 1566 aa16.8■□□□□ 0.28
SCRN3-212ENST00000548868 HRCP23327 699 aa16.8■□□□□ 0.28
SCRN3-212ENST00000548868 ACIN1Q9UKV3 1341 aaKnown RBP16.79■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 14.6 ms