RNA–Protein interactions for RNA: ENST00000548786.1

DDX54-205, Transcript of DEAD-box helicase 54, humanhuman

TSL 2

Gene DDX54, Length 498 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX54-205ENST00000548786 SCAPERQ9BY12 1400 aa25.12■■□□□ 1.61
DDX54-205ENST00000548786 CDC42BPBQ9Y5S2 1711 aa25.12■■□□□ 1.61
DDX54-205ENST00000548786 PREX2Q70Z35 1606 aa25.12■■□□□ 1.61
DDX54-205ENST00000548786 VPS8Q8N3P4 1428 aa25.12■■□□□ 1.61
DDX54-205ENST00000548786 CDC42BPAQ5VT25 1732 aa25.09■■□□□ 1.61
DDX54-205ENST00000548786 POGZQ7Z3K3 1410 aa25.07■■□□□ 1.6
DDX54-205ENST00000548786 EHBP1L1Q8N3D4 1523 aa25.05■■□□□ 1.6
DDX54-205ENST00000548786 ARHGEF40Q8TER5 1519 aa25.04■■□□□ 1.6
DDX54-205ENST00000548786 ZNF777Q9ULD5 760 aaPredicted RBP25.04■■□□□ 1.6
DDX54-205ENST00000548786 ZMYM4Q5VZL5 1548 aa25.02■■□□□ 1.6
DDX54-205ENST00000548786 TIAM1Q13009 1591 aa25.02■■□□□ 1.6
DDX54-205ENST00000548786 YEATS2Q9ULM3 1422 aa25.02■■□□□ 1.6
DDX54-205ENST00000548786 GPATCH8Q9UKJ3 1502 aaKnown RBP25.02■■□□□ 1.6
DDX54-205ENST00000548786 CCNB3Q8WWL7 1395 aa25.01■■□□□ 1.59
DDX54-205ENST00000548786 ZFYVE16Q7Z3T8 1539 aa25.01■■□□□ 1.59
DDX54-205ENST00000548786 ABCC1P33527 1531 aa24.99■■□□□ 1.59
DDX54-205ENST00000548786 ARID4BQ4LE39 1312 aaPredicted RBP24.99■■□□□ 1.59
DDX54-205ENST00000548786 AFAP1Q8N556 730 aa24.98■■□□□ 1.59
DDX54-205ENST00000548786 ARHGEF12Q9NZN5 1544 aa24.96■■□□□ 1.59
DDX54-205ENST00000548786 ZNF518AQ6AHZ1 1483 aa24.96■■□□□ 1.59
DDX54-205ENST00000548786 MYT1LQ9UL68 1186 aa24.96■■□□□ 1.59
DDX54-205ENST00000548786 ITSN2Q9NZM3 1697 aa24.96■■□□□ 1.59
DDX54-205ENST00000548786 SAMD9LQ8IVG5 1584 aa24.96■■□□□ 1.59
DDX54-205ENST00000548786 CFDP1Q9UEE9 299 aaPredicted RBP24.95■■□□□ 1.58
DDX54-205ENST00000548786 TRAPPC8Q9Y2L5 1435 aa24.95■■□□□ 1.58
DDX54-205ENST00000548786 SUPT6HQ7KZ85 1726 aaKnown RBP24.93■■□□□ 1.58
DDX54-205ENST00000548786 SYCP2Q9BX26 1530 aa24.92■■□□□ 1.58
DDX54-205ENST00000548786 NCOA2Q15596 1464 aa24.92■■□□□ 1.58
DDX54-205ENST00000548786 MAGI2Q86UL8 1455 aa24.92■■□□□ 1.58
DDX54-205ENST00000548786 KDM5CP41229 1560 aa24.91■■□□□ 1.58
DDX54-205ENST00000548786 SIGLEC1Q9BZZ2 1709 aa24.91■■□□□ 1.58
DDX54-205ENST00000548786 LRRC9Q6ZRR7 1453 aa24.9■■□□□ 1.58
DDX54-205ENST00000548786 KANK4Q5T7N3 995 aaPredicted RBP24.9■■□□□ 1.58
DDX54-205ENST00000548786 HECW2Q9P2P5 1572 aa24.89■■□□□ 1.58
DDX54-205ENST00000548786 HNRNPMP52272 730 aaKnown RBP eCLIP24.89■■□□□ 1.58
DDX54-205ENST00000548786 ZNF644Q9H582 1327 aaPredicted RBP24.87■■□□□ 1.57
DDX54-205ENST00000548786 BCORL1Q5H9F3 1711 aa24.86■■□□□ 1.57
DDX54-205ENST00000548786 ATP10AO60312 1499 aa24.84■■□□□ 1.57
DDX54-205ENST00000548786 APLP2Q06481 763 aa24.84■■□□□ 1.57
DDX54-205ENST00000548786 MLECQ14165 292 aa24.84■■□□□ 1.57
DDX54-205ENST00000548786 ADAMTSL3P82987 1691 aa24.84■■□□□ 1.57
DDX54-205ENST00000548786 ABCA6Q8N139 1617 aa24.83■■□□□ 1.57
DDX54-205ENST00000548786 MAP3K1Q13233 1512 aa24.83■■□□□ 1.57
DDX54-205ENST00000548786 DIP2CQ9Y2E4 1556 aa24.83■■□□□ 1.57
DDX54-205ENST00000548786 MADDQ8WXG6 1647 aa24.83■■□□□ 1.56
DDX54-205ENST00000548786 C9orf84Q5VXU9 1444 aa24.82■■□□□ 1.56
DDX54-205ENST00000548786 PLEKHH2Q8IVE3 1493 aa24.82■■□□□ 1.56
DDX54-205ENST00000548786 MLH3Q9UHC1 1453 aa24.8■■□□□ 1.56
DDX54-205ENST00000548786 KIAA1107Q9UPP5 1409 aa24.78■■□□□ 1.56
DDX54-205ENST00000548786 KIDINS220Q9ULH0 1771 aa24.78■■□□□ 1.56
DDX54-205ENST00000548786 SPAG9O60271 1321 aaKnown RBP24.77■■□□□ 1.56
DDX54-205ENST00000548786 CAMSAP2Q08AD1 1489 aa24.77■■□□□ 1.56
DDX54-205ENST00000548786 RIMS1Q86UR5 1692 aaKnown RBP24.76■■□□□ 1.55
DDX54-205ENST00000548786 PLPPR3Q6T4P5 718 aa24.75■■□□□ 1.55
DDX54-205ENST00000548786 PTPRMP28827 1452 aa24.75■■□□□ 1.55
DDX54-205ENST00000548786 ATP7AQ04656 1500 aa24.72■■□□□ 1.55
DDX54-205ENST00000548786 MBD5Q9P267 1494 aa24.71■■□□□ 1.55
DDX54-205ENST00000548786 INO80Q9ULG1 1556 aaPredicted RBP24.71■■□□□ 1.55
DDX54-205ENST00000548786 FER1L4A9Z1Z3 1794 aa24.7■■□□□ 1.54
DDX54-205ENST00000548786 MYOM3Q5VTT5 1437 aa24.69■■□□□ 1.54
DDX54-205ENST00000548786 REREQ9P2R6 1566 aa24.67■■□□□ 1.54
DDX54-205ENST00000548786 CCDC141Q6ZP82 1450 aa24.65■■□□□ 1.54
DDX54-205ENST00000548786 AGLP35573 1532 aa24.61■■□□□ 1.53
DDX54-205ENST00000548786 A2MP01023 1474 aa24.6■■□□□ 1.53
DDX54-205ENST00000548786 MIA2Q96PC5 1412 aa24.59■■□□□ 1.53
DDX54-205ENST00000548786 ARHGEF5Q12774 1597 aa24.59■■□□□ 1.53
DDX54-205ENST00000548786 ADGBQ8N7X0 1667 aa24.57■■□□□ 1.52
DDX54-205ENST00000548786 PLXNC1O60486 1568 aa24.56■■□□□ 1.52
DDX54-205ENST00000548786 RTEL1-TNFRSF6BF6WH68 1400 aa24.55■■□□□ 1.52
DDX54-205ENST00000548786 PTPN23Q9H3S7 1636 aa24.55■■□□□ 1.52
DDX54-205ENST00000548786 CEBPAP49715 358 aaPredicted RBP24.55■■□□□ 1.52
DDX54-205ENST00000548786 PPARGC1BQ86YN6 1023 aaKnown RBP24.54■■□□□ 1.52
DDX54-205ENST00000548786 FGD6Q6ZV73 1430 aa24.53■■□□□ 1.52
DDX54-205ENST00000548786 TSPY4P0CV99 314 aa24.53■■□□□ 1.52
DDX54-205ENST00000548786 TSPY10P0CW01 314 aa24.53■■□□□ 1.52
DDX54-205ENST00000548786 RSPH4AQ5TD94 716 aa24.53■■□□□ 1.52
DDX54-205ENST00000548786 ESF1Q9H501 851 aaKnown RBP24.53■■□□□ 1.52
DDX54-205ENST00000548786 GGT6Q6P531 493 aa24.5■■□□□ 1.51
DDX54-205ENST00000548786 DHX29Q7Z478 1369 aaKnown RBP24.47■■□□□ 1.51
DDX54-205ENST00000548786 MAST1Q9Y2H9 1570 aa24.46■■□□□ 1.51
DDX54-205ENST00000548786 C3P01024 1663 aa24.45■■□□□ 1.5
DDX54-205ENST00000548786 LMTK3Q96Q04 1460 aa24.45■■□□□ 1.5
DDX54-205ENST00000548786 TCOF1Q13428 1488 aaKnown RBP24.44■■□□□ 1.5
DDX54-205ENST00000548786 ABCC5O15440 1437 aa24.44■■□□□ 1.5
DDX54-205ENST00000548786 CROCC2H7BZ55 1655 aa24.43■■□□□ 1.5
DDX54-205ENST00000548786 CLTCQ00610 1675 aaKnown RBP24.43■■□□□ 1.5
DDX54-205ENST00000548786 KIF3BO15066 747 aa24.43■■□□□ 1.5
DDX54-205ENST00000548786 FAM50AQ14320 339 aaKnown RBP24.43■■□□□ 1.5
DDX54-205ENST00000548786 DNMT1P26358 1616 aaKnown RBP24.41■■□□□ 1.5
DDX54-205ENST00000548786 DAPK1P53355 1430 aa24.41■■□□□ 1.5
DDX54-205ENST00000548786 CNTLNQ9NXG0 1405 aa24.41■■□□□ 1.5
DDX54-205ENST00000548786 HSPA2P54652 639 aa24.4■■□□□ 1.5
DDX54-205ENST00000548786 CHIC2Q9UKJ5 165 aa24.38■■□□□ 1.49
DDX54-205ENST00000548786 SHANK2Q9UPX8 1470 aa24.37■■□□□ 1.49
DDX54-205ENST00000548786 RRP7BPQ9NSQ0 103 aa24.36■■□□□ 1.49
DDX54-205ENST00000548786 MROH2AA6NES4 1674 aa24.36■■□□□ 1.49
DDX54-205ENST00000548786 PREX1Q8TCU6 1659 aa24.36■■□□□ 1.49
DDX54-205ENST00000548786 ZMYM3Q14202 1370 aa24.35■■□□□ 1.49
DDX54-205ENST00000548786 KIF15Q9NS87 1388 aa24.34■■□□□ 1.49
DDX54-205ENST00000548786 DUOX2Q9NRD8 1548 aa24.31■■□□□ 1.48
Retrieved 100 of 20,778 RNA–protein pairs in 16.4 ms