RNA–Protein interactions for RNA: ENST00000548401.1

LETMD1-216, Transcript of LETM1 domain containing 1, humanhuman

TSL 3

Gene LETMD1, Length 433 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LETMD1-216ENST00000548401 FANCAO15360 1455 aa26.99■■□□□ 1.91
LETMD1-216ENST00000548401 NEO1Q92859 1461 aa26.99■■□□□ 1.91
LETMD1-216ENST00000548401 CCNB3Q8WWL7 1395 aa26.97■■□□□ 1.91
LETMD1-216ENST00000548401 SAMD9LQ8IVG5 1584 aa26.92■■□□□ 1.9
LETMD1-216ENST00000548401 PHLDB1Q86UU1 1377 aa26.92■■□□□ 1.9
LETMD1-216ENST00000548401 MYOM3Q5VTT5 1437 aa26.91■■□□□ 1.9
LETMD1-216ENST00000548401 ABCC1P33527 1531 aa26.9■■□□□ 1.9
LETMD1-216ENST00000548401 KDM6BO15054 1643 aa26.88■■□□□ 1.89
LETMD1-216ENST00000548401 AKNAQ7Z591 1439 aa26.88■■□□□ 1.89
LETMD1-216ENST00000548401 COL17A1Q9UMD9 1497 aaPredicted RBP26.87■■□□□ 1.89
LETMD1-216ENST00000548401 FRMPD1Q5SYB0 1578 aa26.86■■□□□ 1.89
LETMD1-216ENST00000548401 ADGRL1O94910 1474 aa26.86■■□□□ 1.89
LETMD1-216ENST00000548401 MIA2Q96PC5 1412 aa26.84■■□□□ 1.89
LETMD1-216ENST00000548401 EFCAB2Q5VUJ9 269 aa26.84■■□□□ 1.89
LETMD1-216ENST00000548401 RICTORQ6R327 1708 aa26.83■■□□□ 1.89
LETMD1-216ENST00000548401 CAMSAP2Q08AD1 1489 aa26.82■■□□□ 1.88
LETMD1-216ENST00000548401 FGD6Q6ZV73 1430 aa26.82■■□□□ 1.88
LETMD1-216ENST00000548401 SYCP2Q9BX26 1530 aa26.81■■□□□ 1.88
LETMD1-216ENST00000548401 ARHGEF12Q9NZN5 1544 aa26.81■■□□□ 1.88
LETMD1-216ENST00000548401 PPARGC1BQ86YN6 1023 aaKnown RBP26.81■■□□□ 1.88
LETMD1-216ENST00000548401 CFDP1Q9UEE9 299 aaPredicted RBP26.81■■□□□ 1.88
LETMD1-216ENST00000548401 PTPN23Q9H3S7 1636 aa26.79■■□□□ 1.88
LETMD1-216ENST00000548401 PLEKHH2Q8IVE3 1493 aa26.79■■□□□ 1.88
LETMD1-216ENST00000548401 POGZQ7Z3K3 1410 aa26.78■■□□□ 1.88
LETMD1-216ENST00000548401 TCOF1Q13428 1488 aaKnown RBP26.77■■□□□ 1.88
LETMD1-216ENST00000548401 DENND4BO75064 1496 aaPredicted RBP26.76■■□□□ 1.87
LETMD1-216ENST00000548401 SCAPERQ9BY12 1400 aa26.76■■□□□ 1.87
LETMD1-216ENST00000548401 KIAA1107Q9UPP5 1409 aa26.76■■□□□ 1.87
LETMD1-216ENST00000548401 KDM5CP41229 1560 aa26.75■■□□□ 1.87
LETMD1-216ENST00000548401 ZMYM4Q5VZL5 1548 aa26.75■■□□□ 1.87
LETMD1-216ENST00000548401 ZNF644Q9H582 1327 aaPredicted RBP26.73■■□□□ 1.87
LETMD1-216ENST00000548401 MBD5Q9P267 1494 aa26.73■■□□□ 1.87
LETMD1-216ENST00000548401 ARHGEF5Q12774 1597 aa26.71■■□□□ 1.87
LETMD1-216ENST00000548401 ZNF518AQ6AHZ1 1483 aa26.71■■□□□ 1.87
LETMD1-216ENST00000548401 ZNF777Q9ULD5 760 aaPredicted RBP26.71■■□□□ 1.87
LETMD1-216ENST00000548401 TRAPPC8Q9Y2L5 1435 aa26.71■■□□□ 1.87
LETMD1-216ENST00000548401 RRBP1Q9P2E9 1410 aaKnown RBP26.67■■□□□ 1.86
LETMD1-216ENST00000548401 CROCC2H7BZ55 1655 aa26.66■■□□□ 1.86
LETMD1-216ENST00000548401 RAPGEF3O95398 923 aa26.65■■□□□ 1.86
LETMD1-216ENST00000548401 CCDC141Q6ZP82 1450 aa26.65■■□□□ 1.86
LETMD1-216ENST00000548401 HECW2Q9P2P5 1572 aa26.65■■□□□ 1.86
LETMD1-216ENST00000548401 DNMT1P26358 1616 aaKnown RBP26.65■■□□□ 1.86
LETMD1-216ENST00000548401 INO80Q9ULG1 1556 aaPredicted RBP26.64■■□□□ 1.86
LETMD1-216ENST00000548401 ARHGEF40Q8TER5 1519 aa26.63■■□□□ 1.85
LETMD1-216ENST00000548401 ZFYVE16Q7Z3T8 1539 aa26.61■■□□□ 1.85
LETMD1-216ENST00000548401 HNRNPMP52272 730 aaKnown RBP eCLIP26.61■■□□□ 1.85
LETMD1-216ENST00000548401 KIDINS220Q9ULH0 1771 aa26.59■■□□□ 1.85
LETMD1-216ENST00000548401 MAST1Q9Y2H9 1570 aa26.58■■□□□ 1.85
LETMD1-216ENST00000548401 MAGI2Q86UL8 1455 aa26.58■■□□□ 1.85
LETMD1-216ENST00000548401 MLH3Q9UHC1 1453 aa26.58■■□□□ 1.85
LETMD1-216ENST00000548401 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP26.58■■□□□ 1.84
LETMD1-216ENST00000548401 AFAP1Q8N556 730 aa26.57■■□□□ 1.84
LETMD1-216ENST00000548401 SHANK2Q9UPX8 1470 aa26.56■■□□□ 1.84
LETMD1-216ENST00000548401 ATP7AQ04656 1500 aa26.56■■□□□ 1.84
LETMD1-216ENST00000548401 ABCA6Q8N139 1617 aa26.56■■□□□ 1.84
LETMD1-216ENST00000548401 ABCC5O15440 1437 aa26.56■■□□□ 1.84
LETMD1-216ENST00000548401 DAPK1P53355 1430 aa26.56■■□□□ 1.84
LETMD1-216ENST00000548401 YEATS2Q9ULM3 1422 aa26.55■■□□□ 1.84
LETMD1-216ENST00000548401 DIP2CQ9Y2E4 1556 aa26.54■■□□□ 1.84
LETMD1-216ENST00000548401 RTEL1-TNFRSF6BF6WH68 1400 aa26.49■■□□□ 1.83
LETMD1-216ENST00000548401 C9orf84Q5VXU9 1444 aa26.49■■□□□ 1.83
LETMD1-216ENST00000548401 FAM50AQ14320 339 aaKnown RBP26.49■■□□□ 1.83
LETMD1-216ENST00000548401 RSPH4AQ5TD94 716 aa26.49■■□□□ 1.83
LETMD1-216ENST00000548401 PLXNC1O60486 1568 aa26.49■■□□□ 1.83
LETMD1-216ENST00000548401 ADGBQ8N7X0 1667 aa26.48■■□□□ 1.83
LETMD1-216ENST00000548401 SPAG9O60271 1321 aaKnown RBP26.47■■□□□ 1.83
LETMD1-216ENST00000548401 REREQ9P2R6 1566 aa26.46■■□□□ 1.83
LETMD1-216ENST00000548401 SIGLEC1Q9BZZ2 1709 aa26.46■■□□□ 1.83
LETMD1-216ENST00000548401 PTPRKQ15262 1439 aa26.45■■□□□ 1.82
LETMD1-216ENST00000548401 ADGRL2O95490 1459 aa26.43■■□□□ 1.82
LETMD1-216ENST00000548401 ATP10AO60312 1499 aa26.4■■□□□ 1.82
LETMD1-216ENST00000548401 TSPY4P0CV99 314 aa26.36■■□□□ 1.81
LETMD1-216ENST00000548401 TSPY10P0CW01 314 aa26.36■■□□□ 1.81
LETMD1-216ENST00000548401 A2MP01023 1474 aa26.35■■□□□ 1.81
LETMD1-216ENST00000548401 NCOA1Q15788 1441 aa26.33■■□□□ 1.81
LETMD1-216ENST00000548401 AGLP35573 1532 aa26.33■■□□□ 1.81
LETMD1-216ENST00000548401 ROCK1Q13464 1354 aa26.32■■□□□ 1.8
LETMD1-216ENST00000548401 BCORL1Q5H9F3 1711 aa26.31■■□□□ 1.8
LETMD1-216ENST00000548401 DUOX2Q9NRD8 1548 aa26.31■■□□□ 1.8
LETMD1-216ENST00000548401 MYT1LQ9UL68 1186 aa26.31■■□□□ 1.8
LETMD1-216ENST00000548401 ANKRD30AQ9BXX3 1397 aa26.3■■□□□ 1.8
LETMD1-216ENST00000548401 KIF15Q9NS87 1388 aa26.3■■□□□ 1.8
LETMD1-216ENST00000548401 EIF2AK4Q9P2K8 1649 aaKnown RBP26.28■■□□□ 1.8
LETMD1-216ENST00000548401 CHIC2Q9UKJ5 165 aa26.27■■□□□ 1.8
LETMD1-216ENST00000548401 GCC2Q8IWJ2 1684 aa26.27■■□□□ 1.8
LETMD1-216ENST00000548401 DHX29Q7Z478 1369 aaKnown RBP26.26■■□□□ 1.79
LETMD1-216ENST00000548401 ITGAEP38570 1179 aa26.26■■□□□ 1.79
LETMD1-216ENST00000548401 ERBINQ96RT1 1412 aa26.24■■□□□ 1.79
LETMD1-216ENST00000548401 RNF17Q9BXT8 1623 aaKnown RBP26.22■■□□□ 1.79
LETMD1-216ENST00000548401 RRP7BPQ9NSQ0 103 aa26.2■■□□□ 1.78
LETMD1-216ENST00000548401 MROH1Q8NDA8 1641 aa26.19■■□□□ 1.78
LETMD1-216ENST00000548401 HFM1A2PYH4 1435 aa26.19■■□□□ 1.78
LETMD1-216ENST00000548401 ADAMTSL3P82987 1691 aa26.19■■□□□ 1.78
LETMD1-216ENST00000548401 DEPDC5O75140 1603 aa26.18■■□□□ 1.78
LETMD1-216ENST00000548401 NAIPQ13075 1403 aa26.18■■□□□ 1.78
LETMD1-216ENST00000548401 ANKRD50Q9ULJ7 1429 aa26.16■■□□□ 1.78
LETMD1-216ENST00000548401 PRDM15P57071 1507 aaPredicted RBP26.14■■□□□ 1.78
LETMD1-216ENST00000548401 UNC13BO14795 1591 aa26.12■■□□□ 1.77
LETMD1-216ENST00000548401 MADDQ8WXG6 1647 aa26.12■■□□□ 1.77
LETMD1-216ENST00000548401 FER1L4A9Z1Z3 1794 aa26.12■■□□□ 1.77
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms