RNA–Protein interactions for RNA: ENST00000548211.1

RPAP3-205, Transcript of RNA polymerase II associated protein 3, human

TSL 2

Gene RPAP3, Length 555 nt, Biotype processed transcript.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
RPAP3-205	ENST00000548211	ZNF710	Q8N1W2	664 aa		11.94	□□□□□ -0.5
RPAP3-205	ENST00000548211	DOK7	Q18PE1	504 aa		11.93	□□□□□ -0.5
RPAP3-205	ENST00000548211	HS3ST6	Q96QI5	342 aa		11.93	□□□□□ -0.5
RPAP3-205	ENST00000548211	HOXB1	P14653	301 aa	Predicted RBP	11.91	□□□□□ -0.5
RPAP3-205	ENST00000548211	CHGA	P10645	457 aa	Known RBP	11.89	□□□□□ -0.51
RPAP3-205	ENST00000548211	HS6ST3	Q8IZP7	471 aa		11.88	□□□□□ -0.51
RPAP3-205	ENST00000548211	C2orf72	A6NCS6	295 aa		11.87	□□□□□ -0.51
RPAP3-205	ENST00000548211	KIF3C	O14782	793 aa		11.86	□□□□□ -0.51
RPAP3-205	ENST00000548211	RIMBP2	O15034	1052 aa		11.84	□□□□□ -0.51
RPAP3-205	ENST00000548211	GPR153	Q6NV75	609 aa		11.84	□□□□□ -0.51
RPAP3-205	ENST00000548211	KRTAP3-3	Q9BYR6	98 aa		11.84	□□□□□ -0.51
RPAP3-205	ENST00000548211	KRTAP3-2	Q9BYR7	98 aa		11.84	□□□□□ -0.51
RPAP3-205	ENST00000548211	NKX1-1	Q15270	411 aa	Predicted RBP	11.82	□□□□□ -0.52
RPAP3-205	ENST00000548211	ARSI	Q5FYB1	569 aa		11.82	□□□□□ -0.52
RPAP3-205	ENST00000548211	KHSRP	Q92945	711 aa	Known RBP eCLIP	11.82	□□□□□ -0.52
RPAP3-205	ENST00000548211	ERBB3	P21860	1342 aa		11.82	□□□□□ -0.52
RPAP3-205	ENST00000548211	SPNS2	Q8IVW8	549 aa		11.81	□□□□□ -0.52
RPAP3-205	ENST00000548211	ZSWIM6	Q9HCJ5	1215 aa		11.79	□□□□□ -0.52
RPAP3-205	ENST00000548211	VARS2	Q5ST30	1063 aa	Known RBP	11.78	□□□□□ -0.52
RPAP3-205	ENST00000548211	MMRN1	Q13201	1228 aa		11.75	□□□□□ -0.53
RPAP3-205	ENST00000548211	TMC2	Q8TDI7	906 aa		11.75	□□□□□ -0.53
RPAP3-205	ENST00000548211	DNAJC5	Q9H3Z4	198 aa		11.72	□□□□□ -0.53
RPAP3-205	ENST00000548211	NUDT7	P0C024	238 aa		11.69	□□□□□ -0.54
RPAP3-205	ENST00000548211	DCAF8L2	P0C7V8	631 aa		11.67	□□□□□ -0.54
RPAP3-205	ENST00000548211	PCDHGA4	Q9Y5G9	962 aa		11.67	□□□□□ -0.54
RPAP3-205	ENST00000548211	ZNF316	A6NFI3	1004 aa	Predicted RBP	11.66	□□□□□ -0.54
RPAP3-205	ENST00000548211	ZNF687	Q8N1G0	1237 aa		11.66	□□□□□ -0.54
RPAP3-205	ENST00000548211	SLC34A2	O95436	690 aa		11.65	□□□□□ -0.54
RPAP3-205	ENST00000548211	DSG2	Q14126	1118 aa		11.64	□□□□□ -0.55
RPAP3-205	ENST00000548211	GPHN	Q9NQX3	736 aa	Predicted RBP	11.64	□□□□□ -0.55
RPAP3-205	ENST00000548211	PLPP6	Q8IY26	295 aa		11.63	□□□□□ -0.55
RPAP3-205	ENST00000548211	GTPBP6	O43824	516 aa	Predicted RBP	11.62	□□□□□ -0.55
RPAP3-205	ENST00000548211	FOXK1	P85037	733 aa		11.62	□□□□□ -0.55
RPAP3-205	ENST00000548211	LHX6	Q9UPM6	363 aa		11.62	□□□□□ -0.55
RPAP3-205	ENST00000548211	PTCD2	Q8WV60	388 aa	Known RBP	11.56	□□□□□ -0.56
RPAP3-205	ENST00000548211	RYDEN	Q9NUL5	291 aa	Known RBP	11.56	□□□□□ -0.56
RPAP3-205	ENST00000548211	KDM4F	A0A1W2PPD8	638 aa		11.55	□□□□□ -0.56
RPAP3-205	ENST00000548211	POTEE	Q6S8J3	1075 aa		11.55	□□□□□ -0.56
RPAP3-205	ENST00000548211	CRISPLD2	Q9H0B8	497 aa		11.55	□□□□□ -0.56
RPAP3-205	ENST00000548211	NCKAP5L	Q9HCH0	1330 aa		11.54	□□□□□ -0.56
RPAP3-205	ENST00000548211	AXIN2	Q9Y2T1	843 aa		11.53	□□□□□ -0.56
RPAP3-205	ENST00000548211	ANKRD13D	Q6ZTN6	518 aa		11.52	□□□□□ -0.57
RPAP3-205	ENST00000548211	UPF1	Q92900	1129 aa	Known RBP eCLIP	11.5	□□□□□ -0.57
RPAP3-205	ENST00000548211	LSM11	P83369	360 aa	Known RBP eCLIP	11.48	□□□□□ -0.57
RPAP3-205	ENST00000548211	PPP1R15B	Q5SWA1	713 aa		11.48	□□□□□ -0.57
RPAP3-205	ENST00000548211	PDE4A	P27815	886 aa		11.46	□□□□□ -0.57
RPAP3-205	ENST00000548211	OXER1	Q8TDS5	423 aa		11.46	□□□□□ -0.57
RPAP3-205	ENST00000548211	CADPS2	Q86UW7	1296 aa		11.45	□□□□□ -0.58
RPAP3-205	ENST00000548211	LARP6	Q9BRS8	491 aa	Known RBP	11.45	□□□□□ -0.58
RPAP3-205	ENST00000548211	MYT1L	Q9UL68	1186 aa		11.45	□□□□□ -0.58
RPAP3-205	ENST00000548211	RNF166	Q96A37	237 aa	Predicted RBP	11.44	□□□□□ -0.58
RPAP3-205	ENST00000548211	TBC1D12	O60347	775 aa		11.43	□□□□□ -0.58
RPAP3-205	ENST00000548211	PBX2	P40425	430 aa		11.42	□□□□□ -0.58
RPAP3-205	ENST00000548211	PSEN2	P49810	448 aa		11.4	□□□□□ -0.58
RPAP3-205	ENST00000548211	RTN4	Q9NQC3	1192 aa	Known RBP	11.39	□□□□□ -0.59
RPAP3-205	ENST00000548211	PSD	A5PKW4	1024 aa	Predicted RBP	11.38	□□□□□ -0.59
RPAP3-205	ENST00000548211	ARHGAP33	O14559	1287 aa		11.38	□□□□□ -0.59
RPAP3-205	ENST00000548211	DMRTA1	Q5VZB9	504 aa		11.38	□□□□□ -0.59
RPAP3-205	ENST00000548211	DDX27	Q96GQ7	796 aa	Known RBP	11.38	□□□□□ -0.59
RPAP3-205	ENST00000548211	MFSD10	Q14728	455 aa		11.36	□□□□□ -0.59
RPAP3-205	ENST00000548211	PPP4R3B	Q5MIZ7	849 aa		11.35	□□□□□ -0.59
RPAP3-205	ENST00000548211	EMILIN3	Q9NT22	766 aa		11.34	□□□□□ -0.59
RPAP3-205	ENST00000548211	PTGER2	P43116	358 aa		11.33	□□□□□ -0.6
RPAP3-205	ENST00000548211	ADGRD1	Q6QNK2	874 aa		11.33	□□□□□ -0.6
RPAP3-205	ENST00000548211	ZNF454	Q8N9F8	522 aa		11.33	□□□□□ -0.6
RPAP3-205	ENST00000548211	BBX	Q8WY36	941 aa	Predicted RBP	11.33	□□□□□ -0.6
RPAP3-205	ENST00000548211	AMER1	Q5JTC6	1135 aa	Predicted RBP	11.32	□□□□□ -0.6
RPAP3-205	ENST00000548211	EVI5	O60447	810 aa		11.31	□□□□□ -0.6
RPAP3-205	ENST00000548211	KCNK17	Q96T54	332 aa		11.3	□□□□□ -0.6
RPAP3-205	ENST00000548211	ANO8	Q9HCE9	1232 aa	Predicted RBP	11.3	□□□□□ -0.6
RPAP3-205	ENST00000548211	FOSB	P53539	338 aa		11.28	□□□□□ -0.6
RPAP3-205	ENST00000548211	MAP3K9	P80192	1104 aa		11.28	□□□□□ -0.6
RPAP3-205	ENST00000548211	HR	O43593	1189 aa		11.26	□□□□□ -0.61
RPAP3-205	ENST00000548211	TK2	O00142	265 aa		11.25	□□□□□ -0.61
RPAP3-205	ENST00000548211	BCL2L12	Q9HB09	334 aa		11.24	□□□□□ -0.61
RPAP3-205	ENST00000548211	SPRYD3	Q8NCJ5	442 aa		11.22	□□□□□ -0.61
RPAP3-205	ENST00000548211	JPH4	Q96JJ6	628 aa		11.22	□□□□□ -0.61
RPAP3-205	ENST00000548211	ADAM33	Q9BZ11	813 aa		11.22	□□□□□ -0.61
RPAP3-205	ENST00000548211	CAMK2B	Q13554	666 aa		11.2	□□□□□ -0.62
RPAP3-205	ENST00000548211	ZDHHC16	Q969W1	377 aa		11.2	□□□□□ -0.62
RPAP3-205	ENST00000548211	VPS9D1	Q9Y2B5	631 aa		11.2	□□□□□ -0.62
RPAP3-205	ENST00000548211	PCDHGA10	Q9Y5H3	936 aa		11.19	□□□□□ -0.62
RPAP3-205	ENST00000548211	DPYSL4	O14531	572 aa		11.18	□□□□□ -0.62
RPAP3-205	ENST00000548211	PAXIP1	Q6ZW49	1069 aa	Predicted RBP	11.18	□□□□□ -0.62
RPAP3-205	ENST00000548211	KCNH8	Q96L42	1107 aa		11.18	□□□□□ -0.62
RPAP3-205	ENST00000548211	CFAP44	Q96MT7	982 aa		11.18	□□□□□ -0.62
RPAP3-205	ENST00000548211	ZBTB4	Q9P1Z0	1013 aa	Predicted RBP	11.18	□□□□□ -0.62
RPAP3-205	ENST00000548211	PTPRE	P23469	700 aa		11.17	□□□□□ -0.62
RPAP3-205	ENST00000548211	ZBED2	Q9BTP6	218 aa		11.15	□□□□□ -0.62
RPAP3-205	ENST00000548211	KCTD12	Q96CX2	325 aa	Known RBP	11.14	□□□□□ -0.63
RPAP3-205	ENST00000548211	STAC3	Q96MF2	364 aa		11.12	□□□□□ -0.63
RPAP3-205	ENST00000548211	SLC4A5	Q9BY07	1137 aa		11.12	□□□□□ -0.63
RPAP3-205	ENST00000548211	BHMG1	C9JSJ3	638 aa	Predicted RBP	11.11	□□□□□ -0.63
RPAP3-205	ENST00000548211	COL9A1	P20849	921 aa		11.11	□□□□□ -0.63
RPAP3-205	ENST00000548211	HCST	Q9UBK5	93 aa		11.11	□□□□□ -0.63
RPAP3-205	ENST00000548211	PHF14	O94880	888 aa		11.09	□□□□□ -0.63
RPAP3-205	ENST00000548211	TYW1B	Q6NUM6	668 aa		11.09	□□□□□ -0.63
RPAP3-205	ENST00000548211	PROX2	Q3B8N5	592 aa		11.08	□□□□□ -0.64
RPAP3-205	ENST00000548211	DDX12P	Q92771	950 aa		11.08	□□□□□ -0.64
RPAP3-205	ENST00000548211	PPP1R3G	B7ZBB8	358 aa		11.05	□□□□□ -0.64

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