RNA–Protein interactions for RNA: ENST00000548092.5

TRAFD1-204, Transcript of TRAF-type zinc finger domain containing 1, humanhuman

TSL 3

Gene TRAFD1, Length 584 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAFD1-204ENST00000548092 C2orf72A6NCS6 295 aa9.9□□□□□ -0.82
TRAFD1-204ENST00000548092 KIF3CO14782 793 aa9.9□□□□□ -0.82
TRAFD1-204ENST00000548092 DCAF8L2P0C7V8 631 aa9.9□□□□□ -0.82
TRAFD1-204ENST00000548092 POTEB3A0JP26 581 aa9.89□□□□□ -0.83
TRAFD1-204ENST00000548092 POTEBQ6S5H4 581 aa9.89□□□□□ -0.83
TRAFD1-204ENST00000548092 CDAN1Q8IWY9 1227 aa9.89□□□□□ -0.83
TRAFD1-204ENST00000548092 PCDH10Q9P2E7 1040 aa9.88□□□□□ -0.83
TRAFD1-204ENST00000548092 DOK7Q18PE1 504 aa9.87□□□□□ -0.83
TRAFD1-204ENST00000548092 HOXB1P14653 301 aaPredicted RBP9.86□□□□□ -0.83
TRAFD1-204ENST00000548092 RTN4Q9NQC3 1192 aaKnown RBP9.86□□□□□ -0.83
TRAFD1-204ENST00000548092 EMP3P54852 163 aa9.85□□□□□ -0.83
TRAFD1-204ENST00000548092 ZNF710Q8N1W2 664 aa9.85□□□□□ -0.83
TRAFD1-204ENST00000548092 GTPBP6O43824 516 aaPredicted RBP9.84□□□□□ -0.83
TRAFD1-204ENST00000548092 FAM205CA6NFA0 338 aa9.83□□□□□ -0.84
TRAFD1-204ENST00000548092 GPR153Q6NV75 609 aa9.83□□□□□ -0.84
TRAFD1-204ENST00000548092 KHSRPQ92945 711 aaKnown RBP eCLIP9.81□□□□□ -0.84
TRAFD1-204ENST00000548092 HS3ST6Q96QI5 342 aa9.81□□□□□ -0.84
TRAFD1-204ENST00000548092 ARSIQ5FYB1 569 aa9.8□□□□□ -0.84
TRAFD1-204ENST00000548092 AMER1Q5JTC6 1135 aaPredicted RBP9.8□□□□□ -0.84
TRAFD1-204ENST00000548092 TMC2Q8TDI7 906 aa9.8□□□□□ -0.84
TRAFD1-204ENST00000548092 RIMBP2O15034 1052 aa9.78□□□□□ -0.84
TRAFD1-204ENST00000548092 ZSWIM6Q9HCJ5 1215 aa9.78□□□□□ -0.84
TRAFD1-204ENST00000548092 GPHNQ9NQX3 736 aaPredicted RBP9.76□□□□□ -0.85
TRAFD1-204ENST00000548092 RYDENQ9NUL5 291 aaKnown RBP9.75□□□□□ -0.85
TRAFD1-204ENST00000548092 ERBB3P21860 1342 aa9.75□□□□□ -0.85
TRAFD1-204ENST00000548092 FOXK1P85037 733 aa9.74□□□□□ -0.85
TRAFD1-204ENST00000548092 DSG2Q14126 1118 aa9.74□□□□□ -0.85
TRAFD1-204ENST00000548092 KRTAP3-3Q9BYR6 98 aa9.73□□□□□ -0.85
TRAFD1-204ENST00000548092 KRTAP3-2Q9BYR7 98 aa9.73□□□□□ -0.85
TRAFD1-204ENST00000548092 SLC34A2O95436 690 aa9.72□□□□□ -0.85
TRAFD1-204ENST00000548092 PLPP6Q8IY26 295 aa9.72□□□□□ -0.85
TRAFD1-204ENST00000548092 VARS2Q5ST30 1063 aaKnown RBP9.71□□□□□ -0.86
TRAFD1-204ENST00000548092 CRISPLD2Q9H0B8 497 aa9.71□□□□□ -0.86
TRAFD1-204ENST00000548092 PCDHGA4Q9Y5G9 962 aa9.71□□□□□ -0.86
TRAFD1-204ENST00000548092 NCKAP5LQ9HCH0 1330 aa9.71□□□□□ -0.86
TRAFD1-204ENST00000548092 NUDT7P0C024 238 aa9.7□□□□□ -0.86
TRAFD1-204ENST00000548092 CADPS2Q86UW7 1296 aa9.68□□□□□ -0.86
TRAFD1-204ENST00000548092 BBXQ8WY36 941 aaPredicted RBP9.68□□□□□ -0.86
TRAFD1-204ENST00000548092 PTCD2Q8WV60 388 aaKnown RBP9.67□□□□□ -0.86
TRAFD1-204ENST00000548092 ZNF316A6NFI3 1004 aaPredicted RBP9.66□□□□□ -0.86
TRAFD1-204ENST00000548092 KDM4FA0A1W2PPD8 638 aa9.65□□□□□ -0.86
TRAFD1-204ENST00000548092 SPNS2Q8IVW8 549 aa9.65□□□□□ -0.86
TRAFD1-204ENST00000548092 PDE4AP27815 886 aa9.64□□□□□ -0.87
TRAFD1-204ENST00000548092 ZNF687Q8N1G0 1237 aa9.64□□□□□ -0.87
TRAFD1-204ENST00000548092 LHX6Q9UPM6 363 aa9.64□□□□□ -0.87
TRAFD1-204ENST00000548092 LARP6Q9BRS8 491 aaKnown RBP9.63□□□□□ -0.87
TRAFD1-204ENST00000548092 PPP1R15BQ5SWA1 713 aa9.62□□□□□ -0.87
TRAFD1-204ENST00000548092 POTEEQ6S8J3 1075 aa9.59□□□□□ -0.87
TRAFD1-204ENST00000548092 OXER1Q8TDS5 423 aa9.59□□□□□ -0.87
TRAFD1-204ENST00000548092 UPF1Q92900 1129 aaKnown RBP eCLIP9.59□□□□□ -0.87
TRAFD1-204ENST00000548092 MMRN1Q13201 1228 aa9.58□□□□□ -0.88
TRAFD1-204ENST00000548092 MFSD10Q14728 455 aa9.57□□□□□ -0.88
TRAFD1-204ENST00000548092 SPRYD3Q8NCJ5 442 aa9.57□□□□□ -0.88
TRAFD1-204ENST00000548092 DDX27Q96GQ7 796 aaKnown RBP9.57□□□□□ -0.88
TRAFD1-204ENST00000548092 PAXIP1Q6ZW49 1069 aaPredicted RBP9.55□□□□□ -0.88
TRAFD1-204ENST00000548092 TBC1D12O60347 775 aa9.54□□□□□ -0.88
TRAFD1-204ENST00000548092 AXIN2Q9Y2T1 843 aa9.54□□□□□ -0.88
TRAFD1-204ENST00000548092 CFAP44Q96MT7 982 aa9.53□□□□□ -0.88
TRAFD1-204ENST00000548092 EMILIN3Q9NT22 766 aa9.53□□□□□ -0.88
TRAFD1-204ENST00000548092 ZBTB4Q9P1Z0 1013 aaPredicted RBP9.53□□□□□ -0.88
TRAFD1-204ENST00000548092 CCDC180Q9P1Z9 1646 aa9.52□□□□□ -0.89
TRAFD1-204ENST00000548092 ANKRD13DQ6ZTN6 518 aa9.49□□□□□ -0.89
TRAFD1-204ENST00000548092 ANO8Q9HCE9 1232 aaPredicted RBP9.48□□□□□ -0.89
TRAFD1-204ENST00000548092 LSM11P83369 360 aaKnown RBP eCLIP9.47□□□□□ -0.89
TRAFD1-204ENST00000548092 EVI5O60447 810 aa9.46□□□□□ -0.9
TRAFD1-204ENST00000548092 PSDA5PKW4 1024 aaPredicted RBP9.45□□□□□ -0.9
TRAFD1-204ENST00000548092 PSEN2P49810 448 aa9.45□□□□□ -0.9
TRAFD1-204ENST00000548092 MAP3K9P80192 1104 aa9.45□□□□□ -0.9
TRAFD1-204ENST00000548092 CAMK2BQ13554 666 aa9.45□□□□□ -0.9
TRAFD1-204ENST00000548092 PBX2P40425 430 aa9.44□□□□□ -0.9
TRAFD1-204ENST00000548092 ARHGAP33O14559 1287 aa9.43□□□□□ -0.9
TRAFD1-204ENST00000548092 PPP4R3BQ5MIZ7 849 aa9.43□□□□□ -0.9
TRAFD1-204ENST00000548092 DMRTA1Q5VZB9 504 aa9.43□□□□□ -0.9
TRAFD1-204ENST00000548092 ZNF454Q8N9F8 522 aa9.42□□□□□ -0.9
TRAFD1-204ENST00000548092 FOSBP53539 338 aa9.41□□□□□ -0.9
TRAFD1-204ENST00000548092 RB1CC1Q8TDY2 1594 aa9.41□□□□□ -0.9
TRAFD1-204ENST00000548092 DPYSL4O14531 572 aa9.39□□□□□ -0.91
TRAFD1-204ENST00000548092 MYT1LQ9UL68 1186 aa9.39□□□□□ -0.91
TRAFD1-204ENST00000548092 ADGRD1Q6QNK2 874 aa9.37□□□□□ -0.91
TRAFD1-204ENST00000548092 KCNK17Q96T54 332 aa9.37□□□□□ -0.91
TRAFD1-204ENST00000548092 TSHZ2Q9NRE2 1034 aa9.37□□□□□ -0.91
TRAFD1-204ENST00000548092 RNF166Q96A37 237 aaPredicted RBP9.36□□□□□ -0.91
TRAFD1-204ENST00000548092 ADAM33Q9BZ11 813 aa9.36□□□□□ -0.91
TRAFD1-204ENST00000548092 BCL2L12Q9HB09 334 aa9.36□□□□□ -0.91
TRAFD1-204ENST00000548092 JPH4Q96JJ6 628 aa9.35□□□□□ -0.91
TRAFD1-204ENST00000548092 PCDHGA10Q9Y5H3 936 aa9.35□□□□□ -0.91
TRAFD1-204ENST00000548092 ZDHHC16Q969W1 377 aa9.34□□□□□ -0.91
TRAFD1-204ENST00000548092 HRO43593 1189 aa9.33□□□□□ -0.92
TRAFD1-204ENST00000548092 TK2O00142 265 aa9.32□□□□□ -0.92
TRAFD1-204ENST00000548092 PTGER2P43116 358 aa9.32□□□□□ -0.92
TRAFD1-204ENST00000548092 E2F4Q16254 413 aa9.32□□□□□ -0.92
TRAFD1-204ENST00000548092 WDR70Q9NW82 654 aa9.31□□□□□ -0.92
TRAFD1-204ENST00000548092 VPS9D1Q9Y2B5 631 aa9.31□□□□□ -0.92
TRAFD1-204ENST00000548092 CECR2Q9BXF3 1484 aa9.31□□□□□ -0.92
TRAFD1-204ENST00000548092 PTPREP23469 700 aa9.3□□□□□ -0.92
TRAFD1-204ENST00000548092 PHF14O94880 888 aa9.29□□□□□ -0.92
TRAFD1-204ENST00000548092 DDX12PQ92771 950 aa9.28□□□□□ -0.92
TRAFD1-204ENST00000548092 COL9A1P20849 921 aa9.27□□□□□ -0.93
TRAFD1-204ENST00000548092 PDIA6Q15084 440 aa9.27□□□□□ -0.93
TRAFD1-204ENST00000548092 TYW1BQ6NUM6 668 aa9.27□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 110.5 ms