RNA–Protein interactions for RNA: ENST00000547949.6

CALCOCO1-207, Transcript of calcium binding and coiled-coil domain 1, humanhuman

TSL 5

Gene CALCOCO1, Length 532 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALCOCO1-207ENST00000547949 PTPRKQ15262 1439 aa19.08■□□□□ 0.64
CALCOCO1-207ENST00000547949 MYO5CQ9NQX4 1742 aa19.06■□□□□ 0.64
CALCOCO1-207ENST00000547949 CDC42BPBQ9Y5S2 1711 aa19.05■□□□□ 0.64
CALCOCO1-207ENST00000547949 ARHGAP5Q13017 1502 aa19.05■□□□□ 0.64
CALCOCO1-207ENST00000547949 DNMT1P26358 1616 aaKnown RBP19.04■□□□□ 0.64
CALCOCO1-207ENST00000547949 DAPK1P53355 1430 aa19.04■□□□□ 0.64
CALCOCO1-207ENST00000547949 SETD5Q9C0A6 1442 aa19.03■□□□□ 0.64
CALCOCO1-207ENST00000547949 CCER1Q8TC90 406 aaPredicted RBP19.03■□□□□ 0.64
CALCOCO1-207ENST00000547949 ABCC5O15440 1437 aa19.02■□□□□ 0.64
CALCOCO1-207ENST00000547949 PLCH2O75038 1416 aa19.02■□□□□ 0.64
CALCOCO1-207ENST00000547949 HRCP23327 699 aa19.02■□□□□ 0.64
CALCOCO1-207ENST00000547949 ABCA9Q8IUA7 1624 aa19.01■□□□□ 0.63
CALCOCO1-207ENST00000547949 SAMD9LQ8IVG5 1584 aa19.01■□□□□ 0.63
CALCOCO1-207ENST00000547949 MAPKBP1O60336 1514 aa19■□□□□ 0.63
CALCOCO1-207ENST00000547949 RAB3GAP2Q9H2M9 1393 aa18.99■□□□□ 0.63
CALCOCO1-207ENST00000547949 CHIC2Q9UKJ5 165 aa18.99■□□□□ 0.63
CALCOCO1-207ENST00000547949 ARAP3Q8WWN8 1544 aa18.98■□□□□ 0.63
CALCOCO1-207ENST00000547949 HFM1A2PYH4 1435 aa18.98■□□□□ 0.63
CALCOCO1-207ENST00000547949 EFCAB2Q5VUJ9 269 aa18.97■□□□□ 0.63
CALCOCO1-207ENST00000547949 PLEKHH2Q8IVE3 1493 aa18.97■□□□□ 0.63
CALCOCO1-207ENST00000547949 AKNAQ7Z591 1439 aa18.96■□□□□ 0.63
CALCOCO1-207ENST00000547949 ARHGEF5Q12774 1597 aa18.96■□□□□ 0.63
CALCOCO1-207ENST00000547949 CROCC2H7BZ55 1655 aa18.95■□□□□ 0.62
CALCOCO1-207ENST00000547949 ROCK1Q13464 1354 aa18.94■□□□□ 0.62
CALCOCO1-207ENST00000547949 NAIPQ13075 1403 aa18.94■□□□□ 0.62
CALCOCO1-207ENST00000547949 HNRNPMP52272 730 aaKnown RBP eCLIP18.94■□□□□ 0.62
CALCOCO1-207ENST00000547949 RRP7BPQ9NSQ0 103 aa18.94■□□□□ 0.62
CALCOCO1-207ENST00000547949 MBD5Q9P267 1494 aa18.93■□□□□ 0.62
CALCOCO1-207ENST00000547949 SYCP2Q9BX26 1530 aa18.93■□□□□ 0.62
CALCOCO1-207ENST00000547949 GCC2Q8IWJ2 1684 aa18.92■□□□□ 0.62
CALCOCO1-207ENST00000547949 SHANK2Q9UPX8 1470 aa18.92■□□□□ 0.62
CALCOCO1-207ENST00000547949 ADGBQ8N7X0 1667 aa18.92■□□□□ 0.62
CALCOCO1-207ENST00000547949 KIAA1107Q9UPP5 1409 aa18.91■□□□□ 0.62
CALCOCO1-207ENST00000547949 CCDC141Q6ZP82 1450 aa18.91■□□□□ 0.62
CALCOCO1-207ENST00000547949 ZEB1P37275 1124 aaPredicted RBP18.91■□□□□ 0.62
CALCOCO1-207ENST00000547949 RSPH4AQ5TD94 716 aa18.9■□□□□ 0.62
CALCOCO1-207ENST00000547949 FANCAO15360 1455 aa18.9■□□□□ 0.62
CALCOCO1-207ENST00000547949 ABCC1P33527 1531 aa18.9■□□□□ 0.62
CALCOCO1-207ENST00000547949 TSPY4P0CV99 314 aa18.89■□□□□ 0.61
CALCOCO1-207ENST00000547949 TSPY10P0CW01 314 aa18.89■□□□□ 0.61
CALCOCO1-207ENST00000547949 DHX57Q6P158 1386 aaKnown RBP18.89■□□□□ 0.61
CALCOCO1-207ENST00000547949 C9orf84Q5VXU9 1444 aa18.89■□□□□ 0.61
CALCOCO1-207ENST00000547949 CD109Q6YHK3 1445 aa18.89■□□□□ 0.61
CALCOCO1-207ENST00000547949 ADGRL2O95490 1459 aa18.89■□□□□ 0.61
CALCOCO1-207ENST00000547949 ANKRD30AQ9BXX3 1397 aa18.87■□□□□ 0.61
CALCOCO1-207ENST00000547949 ARHGEF12Q9NZN5 1544 aa18.87■□□□□ 0.61
CALCOCO1-207ENST00000547949 GLI2P10070 1586 aa18.85■□□□□ 0.61
CALCOCO1-207ENST00000547949 NCOA1Q15788 1441 aa18.85■□□□□ 0.61
CALCOCO1-207ENST00000547949 CFAP74Q9C0B2 1584 aa18.84■□□□□ 0.61
CALCOCO1-207ENST00000547949 MAST1Q9Y2H9 1570 aa18.83■□□□□ 0.6
CALCOCO1-207ENST00000547949 KDM6BO15054 1643 aa18.82■□□□□ 0.6
CALCOCO1-207ENST00000547949 DIP2BQ9P265 1576 aa18.82■□□□□ 0.6
CALCOCO1-207ENST00000547949 ADGRL1O94910 1474 aa18.82■□□□□ 0.6
CALCOCO1-207ENST00000547949 TRAPPC8Q9Y2L5 1435 aa18.82■□□□□ 0.6
CALCOCO1-207ENST00000547949 MAP3K4Q9Y6R4 1608 aa18.82■□□□□ 0.6
CALCOCO1-207ENST00000547949 FAM69CQ0P6D2 419 aa18.79■□□□□ 0.6
CALCOCO1-207ENST00000547949 SCAPERQ9BY12 1400 aa18.79■□□□□ 0.6
CALCOCO1-207ENST00000547949 KIF15Q9NS87 1388 aa18.78■□□□□ 0.6
CALCOCO1-207ENST00000547949 CLSPNQ9HAW4 1339 aa18.77■□□□□ 0.6
CALCOCO1-207ENST00000547949 NEO1Q92859 1461 aa18.77■□□□□ 0.59
CALCOCO1-207ENST00000547949 ACIN1Q9UKV3 1341 aaKnown RBP18.76■□□□□ 0.59
CALCOCO1-207ENST00000547949 PLXNC1O60486 1568 aa18.76■□□□□ 0.59
CALCOCO1-207ENST00000547949 ANKRD50Q9ULJ7 1429 aa18.75■□□□□ 0.59
CALCOCO1-207ENST00000547949 AFAP1Q8N556 730 aa18.75■□□□□ 0.59
CALCOCO1-207ENST00000547949 TRIM52Q96A61 297 aa18.75■□□□□ 0.59
CALCOCO1-207ENST00000547949 SPAG9O60271 1321 aaKnown RBP18.74■□□□□ 0.59
CALCOCO1-207ENST00000547949 RTEL1-TNFRSF6BF6WH68 1400 aa18.72■□□□□ 0.59
CALCOCO1-207ENST00000547949 ZFYVE16Q7Z3T8 1539 aa18.71■□□□□ 0.59
CALCOCO1-207ENST00000547949 POGZQ7Z3K3 1410 aa18.7■□□□□ 0.58
CALCOCO1-207ENST00000547949 INO80Q9ULG1 1556 aaPredicted RBP18.7■□□□□ 0.58
CALCOCO1-207ENST00000547949 ZNF518AQ6AHZ1 1483 aa18.7■□□□□ 0.58
CALCOCO1-207ENST00000547949 ATP7AQ04656 1500 aa18.69■□□□□ 0.58
CALCOCO1-207ENST00000547949 DUOX2Q9NRD8 1548 aa18.69■□□□□ 0.58
CALCOCO1-207ENST00000547949 KIF13AQ9H1H9 1805 aa18.67■□□□□ 0.58
CALCOCO1-207ENST00000547949 DENND4BO75064 1496 aaPredicted RBP18.67■□□□□ 0.58
CALCOCO1-207ENST00000547949 TEX14Q8IWB6 1497 aa18.67■□□□□ 0.58
CALCOCO1-207ENST00000547949 MYT1LQ9UL68 1186 aa18.67■□□□□ 0.58
CALCOCO1-207ENST00000547949 PPRC1Q5VV67 1664 aaKnown RBP18.66■□□□□ 0.58
CALCOCO1-207ENST00000547949 KDM5CP41229 1560 aa18.65■□□□□ 0.58
CALCOCO1-207ENST00000547949 MPHOSPH9Q99550 1183 aa18.65■□□□□ 0.58
CALCOCO1-207ENST00000547949 ERBINQ96RT1 1412 aa18.65■□□□□ 0.58
CALCOCO1-207ENST00000547949 TSPOAP1O95153 1857 aa18.64■□□□□ 0.57
CALCOCO1-207ENST00000547949 PZPP20742 1482 aa18.62■□□□□ 0.57
CALCOCO1-207ENST00000547949 HECW2Q9P2P5 1572 aa18.61■□□□□ 0.57
CALCOCO1-207ENST00000547949 MLH3Q9UHC1 1453 aa18.61■□□□□ 0.57
CALCOCO1-207ENST00000547949 SLC4A1APQ9BWU0 796 aaKnown RBP18.61■□□□□ 0.57
CALCOCO1-207ENST00000547949 KIDINS220Q9ULH0 1771 aa18.6■□□□□ 0.57
CALCOCO1-207ENST00000547949 KDM5DQ9BY66 1539 aa18.6■□□□□ 0.57
CALCOCO1-207ENST00000547949 NUP155O75694 1391 aa18.6■□□□□ 0.57
CALCOCO1-207ENST00000547949 RAPGEF3O95398 923 aa18.6■□□□□ 0.57
CALCOCO1-207ENST00000547949 UNC13BO14795 1591 aa18.59■□□□□ 0.57
CALCOCO1-207ENST00000547949 RICTORQ6R327 1708 aa18.59■□□□□ 0.57
CALCOCO1-207ENST00000547949 SIN3AQ96ST3 1273 aa18.57■□□□□ 0.56
CALCOCO1-207ENST00000547949 FRMPD1Q5SYB0 1578 aa18.56■□□□□ 0.56
CALCOCO1-207ENST00000547949 DHX29Q7Z478 1369 aaKnown RBP18.55■□□□□ 0.56
CALCOCO1-207ENST00000547949 NEUROD1Q13562 356 aa18.55■□□□□ 0.56
CALCOCO1-207ENST00000547949 FOXD1Q16676 465 aa18.54■□□□□ 0.56
CALCOCO1-207ENST00000547949 GRWD1Q9BQ67 446 aaKnown RBP eCLIP18.54■□□□□ 0.563e-6■□□□□ 8.2
CALCOCO1-207ENST00000547949 A2MP01023 1474 aa18.53■□□□□ 0.56
CALCOCO1-207ENST00000547949 MAGI2Q86UL8 1455 aa18.53■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 37.5 ms