RNA–Protein interactions for RNA: ENST00000547946.1

RMST-203, rhabdomyosarcoma 2 associated transcript, humanhuman

Gene RMST, Length 687 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RMST-203ENST00000547946 NCAPD3P42695 1498 aa11.59□□□□□ -0.55
RMST-203ENST00000547946 FAM205CA6NFA0 338 aa11.58□□□□□ -0.56
RMST-203ENST00000547946 ATAD2BQ9ULI0 1458 aa11.53□□□□□ -0.56
RMST-203ENST00000547946 GSE1Q14687 1217 aa11.52□□□□□ -0.57
RMST-203ENST00000547946 NUBP1P53384 320 aa11.51□□□□□ -0.57
RMST-203ENST00000547946 RNF25Q96BH1 459 aaPredicted RBP11.51□□□□□ -0.57
RMST-203ENST00000547946 NKX1-1Q15270 411 aaPredicted RBP11.48□□□□□ -0.57
RMST-203ENST00000547946 SMARCA2P51531 1590 aa11.47□□□□□ -0.57
RMST-203ENST00000547946 GTPBP6O43824 516 aaPredicted RBP11.46□□□□□ -0.57
RMST-203ENST00000547946 SMARCA4P51532 1647 aa11.46□□□□□ -0.58
RMST-203ENST00000547946 HMGXB3Q12766 1538 aa11.45□□□□□ -0.58
RMST-203ENST00000547946 RIOK3O14730 519 aaKnown RBP11.44□□□□□ -0.58
RMST-203ENST00000547946 BAZ1AQ9NRL2 1556 aaPredicted RBP11.43□□□□□ -0.58
RMST-203ENST00000547946 PDCD7Q8N8D1 485 aaKnown RBP11.43□□□□□ -0.58
RMST-203ENST00000547946 TIMELESSQ9UNS1 1208 aa11.42□□□□□ -0.58
RMST-203ENST00000547946 GTF3C3Q9Y5Q9 886 aa11.42□□□□□ -0.58
RMST-203ENST00000547946 CUX2O14529 1486 aa11.41□□□□□ -0.58
RMST-203ENST00000547946 ERCC6Q03468 1493 aa11.41□□□□□ -0.58
RMST-203ENST00000547946 TULP1O00294 542 aaPredicted RBP11.41□□□□□ -0.58
RMST-203ENST00000547946 DCAF8Q5TAQ9 597 aa11.41□□□□□ -0.58
RMST-203ENST00000547946 RNF166Q96A37 237 aaPredicted RBP11.41□□□□□ -0.58
RMST-203ENST00000547946 C3orf67Q6ZVT6 689 aa11.4□□□□□ -0.58
RMST-203ENST00000547946 BAZ1BQ9UIG0 1483 aaKnown RBP11.39□□□□□ -0.59
RMST-203ENST00000547946 PEG3Q9GZU2 1588 aa11.39□□□□□ -0.59
RMST-203ENST00000547946 STK25O00506 426 aa11.36□□□□□ -0.59
RMST-203ENST00000547946 NESP48681 1621 aa11.35□□□□□ -0.59
RMST-203ENST00000547946 VGFO15240 615 aaPredicted RBP11.35□□□□□ -0.59
RMST-203ENST00000547946 FAM212AQ96EL1 285 aa11.35□□□□□ -0.59
RMST-203ENST00000547946 MROH2BQ7Z745 1585 aa11.35□□□□□ -0.59
RMST-203ENST00000547946 L3MBTL3Q96JM7 780 aaPredicted RBP11.34□□□□□ -0.59
RMST-203ENST00000547946 PCDHB8Q9UN66 801 aa11.33□□□□□ -0.6
RMST-203ENST00000547946 HOXB3P14651 431 aaPredicted RBP11.31□□□□□ -0.6
RMST-203ENST00000547946 ERICH6Q7L0X2 663 aa11.31□□□□□ -0.6
RMST-203ENST00000547946 CHRM1P11229 460 aaPredicted RBP11.3□□□□□ -0.6
RMST-203ENST00000547946 PYGBP11216 843 aa11.29□□□□□ -0.6
RMST-203ENST00000547946 RYDENQ9NUL5 291 aaKnown RBP11.29□□□□□ -0.6
RMST-203ENST00000547946 MYT1LQ9UL68 1186 aa11.29□□□□□ -0.6
RMST-203ENST00000547946 TMEM132AQ24JP5 1023 aa11.28□□□□□ -0.6
RMST-203ENST00000547946 LAMC3Q9Y6N6 1575 aa11.26□□□□□ -0.61
RMST-203ENST00000547946 HOXB1P14653 301 aaPredicted RBP11.26□□□□□ -0.61
RMST-203ENST00000547946 STK24Q9Y6E0 443 aa11.25□□□□□ -0.61
RMST-203ENST00000547946 PDS5BQ9NTI5 1447 aa11.25□□□□□ -0.61
RMST-203ENST00000547946 BCL11BQ9C0K0 894 aaPredicted RBP11.24□□□□□ -0.61
RMST-203ENST00000547946 ERBB3P21860 1342 aa11.24□□□□□ -0.61
RMST-203ENST00000547946 CADPSQ9ULU8 1353 aa11.23□□□□□ -0.61
RMST-203ENST00000547946 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP11.22□□□□□ -0.61
RMST-203ENST00000547946 ZFP91Q96JP5 570 aaPredicted RBP11.22□□□□□ -0.61
RMST-203ENST00000547946 MKRN3Q13064 507 aaKnown RBP11.21□□□□□ -0.61
RMST-203ENST00000547946 P3H3Q8IVL6 736 aa11.21□□□□□ -0.61
RMST-203ENST00000547946 THOC2Q8NI27 1593 aaKnown RBP11.2□□□□□ -0.62
RMST-203ENST00000547946 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP11.2□□□□□ -0.62
RMST-203ENST00000547946 DPY19L2Q6NUT2 758 aa11.18□□□□□ -0.62
RMST-203ENST00000547946 ARXQ96QS3 562 aa11.17□□□□□ -0.62
RMST-203ENST00000547946 WIZO95785 1651 aa11.17□□□□□ -0.62
RMST-203ENST00000547946 VARS2Q5ST30 1063 aaKnown RBP11.16□□□□□ -0.62
RMST-203ENST00000547946 ILDR1Q86SU0 546 aaPredicted RBP11.16□□□□□ -0.62
RMST-203ENST00000547946 ZNF710Q8N1W2 664 aa11.16□□□□□ -0.62
RMST-203ENST00000547946 GOLGA2Q08379 1002 aa11.15□□□□□ -0.62
RMST-203ENST00000547946 RSF1Q96T23 1441 aaPredicted RBP11.15□□□□□ -0.62
RMST-203ENST00000547946 DHX30Q7L2E3 1194 aaKnown RBP eCLIP11.13□□□□□ -0.63
RMST-203ENST00000547946 WDR70Q9NW82 654 aa11.13□□□□□ -0.63
RMST-203ENST00000547946 KIF21AQ7Z4S6 1674 aa11.13□□□□□ -0.63
RMST-203ENST00000547946 MRC2Q9UBG0 1479 aa11.12□□□□□ -0.63
RMST-203ENST00000547946 ZNF687Q8N1G0 1237 aa11.11□□□□□ -0.63
RMST-203ENST00000547946 LMOD2Q6P5Q4 547 aa11.1□□□□□ -0.63
RMST-203ENST00000547946 CFTRP13569 1480 aa11.1□□□□□ -0.63
RMST-203ENST00000547946 DOK7Q18PE1 504 aa11.09□□□□□ -0.63
RMST-203ENST00000547946 WDR62O43379 1518 aa11.09□□□□□ -0.63
RMST-203ENST00000547946 KCNV2Q8TDN2 545 aa11.08□□□□□ -0.64
RMST-203ENST00000547946 FANCD2Q9BXW9 1451 aa11.07□□□□□ -0.64
RMST-203ENST00000547946 CEP164Q9UPV0 1460 aa11.07□□□□□ -0.64
RMST-203ENST00000547946 CADPS2Q86UW7 1296 aa11.07□□□□□ -0.64
RMST-203ENST00000547946 BOLA1Q9Y3E2 137 aa11.07□□□□□ -0.64
RMST-203ENST00000547946 TOP2AP11388 1531 aaKnown RBP11.06□□□□□ -0.64
RMST-203ENST00000547946 PTGER2P43116 358 aa11.06□□□□□ -0.64
RMST-203ENST00000547946 C14orf37Q86TY3 774 aa11.06□□□□□ -0.64
RMST-203ENST00000547946 ZNF467Q7Z7K2 595 aaPredicted RBP11.05□□□□□ -0.64
RMST-203ENST00000547946 PSEN1P49768 467 aa11.02□□□□□ -0.65
RMST-203ENST00000547946 ANKRD13DQ6ZTN6 518 aa10.99□□□□□ -0.65
RMST-203ENST00000547946 RIMBP2O15034 1052 aa10.98□□□□□ -0.65
RMST-203ENST00000547946 BRPF1P55201 1214 aaPredicted RBP10.98□□□□□ -0.65
RMST-203ENST00000547946 PLA2G2EQ9NZK7 142 aa10.98□□□□□ -0.65
RMST-203ENST00000547946 URB2Q14146 1524 aaKnown RBP10.98□□□□□ -0.65
RMST-203ENST00000547946 G3V3G9 751 aa10.97□□□□□ -0.65
RMST-203ENST00000547946 GPR153Q6NV75 609 aa10.97□□□□□ -0.65
RMST-203ENST00000547946 DAXXQ9UER7 740 aaPredicted RBP10.97□□□□□ -0.65
RMST-203ENST00000547946 CCDC88BA6NC98 1476 aa10.97□□□□□ -0.65
RMST-203ENST00000547946 PDAP1Q13442 181 aaKnown RBP10.95□□□□□ -0.66
RMST-203ENST00000547946 ARHGEF1Q92888 912 aaKnown RBP10.95□□□□□ -0.66
RMST-203ENST00000547946 HOMEZQ8IX15 550 aa10.94□□□□□ -0.66
RMST-203ENST00000547946 ZC3H15Q8WU90 426 aaKnown RBP10.93□□□□□ -0.66
RMST-203ENST00000547946 ZSWIM6Q9HCJ5 1215 aa10.93□□□□□ -0.66
RMST-203ENST00000547946 MFRPQ9BY79 579 aa10.91□□□□□ -0.66
RMST-203ENST00000547946 CABP2Q9NPB3 220 aa10.9□□□□□ -0.66
RMST-203ENST00000547946 E2F4Q16254 413 aa10.89□□□□□ -0.67
RMST-203ENST00000547946 TMEM92Q6UXU6 159 aa10.89□□□□□ -0.67
RMST-203ENST00000547946 IFT140Q96RY7 1462 aa10.87□□□□□ -0.67
RMST-203ENST00000547946 LSM11P83369 360 aaKnown RBP eCLIP10.87□□□□□ -0.67
RMST-203ENST00000547946 NEUROD2Q15784 382 aa10.87□□□□□ -0.67
RMST-203ENST00000547946 TESPA1A2RU30 521 aaPredicted RBP10.86□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms