RNA–Protein interactions for RNA: ENST00000547926.6

CEP290-204, Transcript of centrosomal protein 290, humanhuman

TSL 1 (best)

Gene CEP290, Length 2,122 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CEP290-204ENST00000547926 AXIN2Q9Y2T1 843 aa8.8□□□□□ -1
CEP290-204ENST00000547926 LSM11P83369 360 aaKnown RBP eCLIP8.79□□□□□ -1
CEP290-204ENST00000547926 PHF8Q9UPP1 1060 aa8.77□□□□□ -1.01
CEP290-204ENST00000547926 ZNF316A6NFI3 1004 aaPredicted RBP8.77□□□□□ -1.01
CEP290-204ENST00000547926 SPOCK2Q92563 424 aa8.76□□□□□ -1.01
CEP290-204ENST00000547926 RNF25Q96BH1 459 aaPredicted RBP8.74□□□□□ -1.01
CEP290-204ENST00000547926 PLA2G2EQ9NZK7 142 aa8.74□□□□□ -1.01
CEP290-204ENST00000547926 PTGER2P43116 358 aa8.72□□□□□ -1.01
CEP290-204ENST00000547926 NUDT7P0C024 238 aa8.72□□□□□ -1.01
CEP290-204ENST00000547926 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP8.68□□□□□ -1.02
CEP290-204ENST00000547926 ZFP91Q96JP5 570 aaPredicted RBP8.68□□□□□ -1.02
CEP290-204ENST00000547926 LHX6Q9UPM6 363 aa8.68□□□□□ -1.02
CEP290-204ENST00000547926 SOX12O15370 315 aa8.65□□□□□ -1.03
CEP290-204ENST00000547926 C2orf72A6NCS6 295 aa8.63□□□□□ -1.03
CEP290-204ENST00000547926 KIF3CO14782 793 aa8.63□□□□□ -1.03
CEP290-204ENST00000547926 FBXO22Q8NEZ5 403 aa8.63□□□□□ -1.03
CEP290-204ENST00000547926 HCSTQ9UBK5 93 aa8.6□□□□□ -1.03
CEP290-204ENST00000547926 ADGRD1Q6QNK2 874 aa8.6□□□□□ -1.03
CEP290-204ENST00000547926 RIOK3O14730 519 aaKnown RBP8.59□□□□□ -1.03
CEP290-204ENST00000547926 PCDHGA4Q9Y5G9 962 aa8.59□□□□□ -1.03
CEP290-204ENST00000547926 DMRTA1Q5VZB9 504 aa8.58□□□□□ -1.04
CEP290-204ENST00000547926 PBX2P40425 430 aa8.57□□□□□ -1.04
CEP290-204ENST00000547926 PSEN2P49810 448 aa8.57□□□□□ -1.04
CEP290-204ENST00000547926 MFRPQ9BY79 579 aa8.56□□□□□ -1.04
CEP290-204ENST00000547926 HRO43593 1189 aa8.54□□□□□ -1.04
CEP290-204ENST00000547926 KCTD12Q96CX2 325 aaKnown RBP8.53□□□□□ -1.04
CEP290-204ENST00000547926 ARHGAP33O14559 1287 aa8.52□□□□□ -1.05
CEP290-204ENST00000547926 BCL11BQ9C0K0 894 aaPredicted RBP8.52□□□□□ -1.05
CEP290-204ENST00000547926 KDM4FA0A1W2PPD8 638 aa8.51□□□□□ -1.05
CEP290-204ENST00000547926 VGFO15240 615 aaPredicted RBP8.51□□□□□ -1.05
CEP290-204ENST00000547926 NLRP6P59044 892 aa8.51□□□□□ -1.05
CEP290-204ENST00000547926 TRIM41Q8WV44 630 aa8.5□□□□□ -1.05
CEP290-204ENST00000547926 SLC34A2O95436 690 aa8.49□□□□□ -1.05
CEP290-204ENST00000547926 STK24Q9Y6E0 443 aa8.46□□□□□ -1.06
CEP290-204ENST00000547926 PTPN5P54829 565 aa8.45□□□□□ -1.06
CEP290-204ENST00000547926 PPP1R37O75864 691 aa8.45□□□□□ -1.06
CEP290-204ENST00000547926 TK2O00142 265 aa8.42□□□□□ -1.06
CEP290-204ENST00000547926 TMC2Q8TDI7 906 aa8.39□□□□□ -1.07
CEP290-204ENST00000547926 KCNK17Q96T54 332 aa8.39□□□□□ -1.07
CEP290-204ENST00000547926 IRX2Q9BZI1 471 aaPredicted RBP8.39□□□□□ -1.07
CEP290-204ENST00000547926 STK25O00506 426 aa8.38□□□□□ -1.07
CEP290-204ENST00000547926 PTCD2Q8WV60 388 aaKnown RBP8.37□□□□□ -1.07
CEP290-204ENST00000547926 VPS9D1Q9Y2B5 631 aa8.36□□□□□ -1.07
CEP290-204ENST00000547926 PSDA5PKW4 1024 aaPredicted RBP8.33□□□□□ -1.08
CEP290-204ENST00000547926 A0A0G2JS52 829 aa8.32□□□□□ -1.08
CEP290-204ENST00000547926 PPP4R3BQ5MIZ7 849 aa8.32□□□□□ -1.08
CEP290-204ENST00000547926 PLPP6Q8IY26 295 aa8.32□□□□□ -1.08
CEP290-204ENST00000547926 THSD4Q6ZMP0 1018 aa8.31□□□□□ -1.08
CEP290-204ENST00000547926 DSG2Q14126 1118 aa8.3□□□□□ -1.08
CEP290-204ENST00000547926 STAC3Q96MF2 364 aa8.3□□□□□ -1.08
CEP290-204ENST00000547926 BHMG1C9JSJ3 638 aaPredicted RBP8.29□□□□□ -1.08
CEP290-204ENST00000547926 LCE2BO14633 110 aa8.29□□□□□ -1.08
CEP290-204ENST00000547926 FOXK1P85037 733 aa8.27□□□□□ -1.08
CEP290-204ENST00000547926 IFFO2Q5TF58 517 aa8.27□□□□□ -1.08
CEP290-204ENST00000547926 RGL2O15211 777 aa8.26□□□□□ -1.09
CEP290-204ENST00000547926 RGS20O76081 388 aa8.24□□□□□ -1.09
CEP290-204ENST00000547926 ZNF454Q8N9F8 522 aa8.24□□□□□ -1.09
CEP290-204ENST00000547926 UPF1Q92900 1129 aaKnown RBP eCLIP8.24□□□□□ -1.09
CEP290-204ENST00000547926 WNT2BQ93097 391 aa8.24□□□□□ -1.09
CEP290-204ENST00000547926 GPHNQ9NQX3 736 aaPredicted RBP8.23□□□□□ -1.09
CEP290-204ENST00000547926 Q6ZNB5 142 aa8.23□□□□□ -1.09
CEP290-204ENST00000547926 ZBED2Q9BTP6 218 aa8.22□□□□□ -1.09
CEP290-204ENST00000547926 BCL2L12Q9HB09 334 aa8.2□□□□□ -1.1
CEP290-204ENST00000547926 ECM2O94769 699 aaPredicted RBP8.19□□□□□ -1.1
CEP290-204ENST00000547926 OXER1Q8TDS5 423 aa8.19□□□□□ -1.1
CEP290-204ENST00000547926 SLC4A5Q9BY07 1137 aa8.18□□□□□ -1.1
CEP290-204ENST00000547926 MRPL50Q8N5N7 158 aaKnown RBP8.17□□□□□ -1.1
CEP290-204ENST00000547926 FOSBP53539 338 aa8.17□□□□□ -1.1
CEP290-204ENST00000547926 PKD2Q13563 968 aa8.17□□□□□ -1.1
CEP290-204ENST00000547926 KCNH8Q96L42 1107 aa8.16□□□□□ -1.1
CEP290-204ENST00000547926 ADAM33Q9BZ11 813 aa8.16□□□□□ -1.1
CEP290-204ENST00000547926 TAOK2Q9UL54 1235 aa8.16□□□□□ -1.1
CEP290-204ENST00000547926 GOLGA8CPA6NN73 597 aa8.15□□□□□ -1.1
CEP290-204ENST00000547926 TBC1D12O60347 775 aa8.15□□□□□ -1.11
CEP290-204ENST00000547926 BCAMP50895 628 aa8.15□□□□□ -1.11
CEP290-204ENST00000547926 PROX2Q3B8N5 592 aa8.14□□□□□ -1.11
CEP290-204ENST00000547926 PTPREP23469 700 aa8.13□□□□□ -1.11
CEP290-204ENST00000547926 ITGBL1O95965 494 aaPredicted RBP8.12□□□□□ -1.11
CEP290-204ENST00000547926 COL9A1P20849 921 aa8.09□□□□□ -1.11
CEP290-204ENST00000547926 WBP1LQ9NX94 342 aa8.08□□□□□ -1.12
CEP290-204ENST00000547926 ANO8Q9HCE9 1232 aaPredicted RBP8.07□□□□□ -1.12
CEP290-204ENST00000547926 ZDHHC16Q969W1 377 aa8.06□□□□□ -1.12
CEP290-204ENST00000547926 NBPF3Q9H094 633 aa8.06□□□□□ -1.12
CEP290-204ENST00000547926 JPH4Q96JJ6 628 aa8.05□□□□□ -1.12
CEP290-204ENST00000547926 CRISPLD2Q9H0B8 497 aa8.05□□□□□ -1.12
CEP290-204ENST00000547926 TRAF7Q6Q0C0 670 aa8.05□□□□□ -1.12
CEP290-204ENST00000547926 NCKAP5LQ9HCH0 1330 aa8.04□□□□□ -1.12
CEP290-204ENST00000547926 EVI5O60447 810 aa8.04□□□□□ -1.12
CEP290-204ENST00000547926 PPP1R15BQ5SWA1 713 aa8.03□□□□□ -1.12
CEP290-204ENST00000547926 GFRA3O60609 400 aa8.03□□□□□ -1.12
CEP290-204ENST00000547926 NKX1-1Q15270 411 aaPredicted RBP8.03□□□□□ -1.12
CEP290-204ENST00000547926 SOWAHBA6NEL2 793 aa8.02□□□□□ -1.13
CEP290-204ENST00000547926 ANKK1Q8NFD2 765 aa8.02□□□□□ -1.13
CEP290-204ENST00000547926 SEPT9Q9UHD8 586 aaPredicted RBP8.02□□□□□ -1.13
CEP290-204ENST00000547926 RABGEF1Q9UJ41 708 aa8.02□□□□□ -1.13
CEP290-204ENST00000547926 PCDHGA10Q9Y5H3 936 aa8.02□□□□□ -1.13
CEP290-204ENST00000547926 ZFRQ96KR1 1074 aaKnown RBP8□□□□□ -1.13
CEP290-204ENST00000547926 KCNC4Q03721 635 aa8□□□□□ -1.13
CEP290-204ENST00000547926 KIAA1468Q9P260 1216 aa7.99□□□□□ -1.13
CEP290-204ENST00000547926 PPP1R3GB7ZBB8 358 aa7.99□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 34.9 ms