RNA–Protein interactions for RNA: ENST00000547872.1

CBX5-203, Transcript of chromobox 5, humanhuman

TSL 2

Gene CBX5, Length 745 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX5-203ENST00000547872 CADPS2Q86UW7 1296 aa9.8□□□□□ -0.84
CBX5-203ENST00000547872 LHX8Q68G74 356 aa9.79□□□□□ -0.84
CBX5-203ENST00000547872 POTEJP0CG39 1038 aa9.78□□□□□ -0.84
CBX5-203ENST00000547872 TMC2Q8TDI7 906 aa9.78□□□□□ -0.84
CBX5-203ENST00000547872 PDE4AP27815 886 aa9.77□□□□□ -0.85
CBX5-203ENST00000547872 VSIG10Q8N0Z9 540 aa9.75□□□□□ -0.85
CBX5-203ENST00000547872 CRISPLD2Q9H0B8 497 aa9.74□□□□□ -0.85
CBX5-203ENST00000547872 LARP6Q9BRS8 491 aaKnown RBP9.73□□□□□ -0.85
CBX5-203ENST00000547872 WDR70Q9NW82 654 aa9.73□□□□□ -0.85
CBX5-203ENST00000547872 NCKAP5LQ9HCH0 1330 aa9.73□□□□□ -0.85
CBX5-203ENST00000547872 C2orf72A6NCS6 295 aa9.72□□□□□ -0.85
CBX5-203ENST00000547872 SLAIN1Q8ND83 568 aa9.72□□□□□ -0.85
CBX5-203ENST00000547872 GPHNQ9NQX3 736 aaPredicted RBP9.72□□□□□ -0.85
CBX5-203ENST00000547872 TMEM92Q6UXU6 159 aa9.71□□□□□ -0.86
CBX5-203ENST00000547872 DDX27Q96GQ7 796 aaKnown RBP9.71□□□□□ -0.86
CBX5-203ENST00000547872 KIF3CO14782 793 aa9.69□□□□□ -0.86
CBX5-203ENST00000547872 PPP1R15BQ5SWA1 713 aa9.68□□□□□ -0.86
CBX5-203ENST00000547872 KDM2AQ9Y2K7 1162 aa9.68□□□□□ -0.86
CBX5-203ENST00000547872 MFSD10Q14728 455 aa9.67□□□□□ -0.86
CBX5-203ENST00000547872 OTUD5Q96G74 571 aa9.67□□□□□ -0.86
CBX5-203ENST00000547872 FOXK1P85037 733 aa9.66□□□□□ -0.86
CBX5-203ENST00000547872 DSG2Q14126 1118 aa9.66□□□□□ -0.86
CBX5-203ENST00000547872 PLPP6Q8IY26 295 aa9.65□□□□□ -0.86
CBX5-203ENST00000547872 E2F4Q16254 413 aa9.6□□□□□ -0.87
CBX5-203ENST00000547872 P3H3Q8IVL6 736 aa9.59□□□□□ -0.87
CBX5-203ENST00000547872 SNPHO15079 494 aa9.58□□□□□ -0.88
CBX5-203ENST00000547872 DOK7Q18PE1 504 aa9.58□□□□□ -0.88
CBX5-203ENST00000547872 RIMBP2O15034 1052 aa9.56□□□□□ -0.88
CBX5-203ENST00000547872 CAMK2BQ13554 666 aa9.55□□□□□ -0.88
CBX5-203ENST00000547872 ZNF710Q8N1W2 664 aa9.54□□□□□ -0.88
CBX5-203ENST00000547872 KCNV2Q8TDN2 545 aa9.54□□□□□ -0.88
CBX5-203ENST00000547872 UPF1Q92900 1129 aaKnown RBP eCLIP9.54□□□□□ -0.88
CBX5-203ENST00000547872 CCDC180Q9P1Z9 1646 aa9.53□□□□□ -0.88
CBX5-203ENST00000547872 SLC34A2O95436 690 aa9.52□□□□□ -0.89
CBX5-203ENST00000547872 HOXB3P14651 431 aaPredicted RBP9.52□□□□□ -0.89
CBX5-203ENST00000547872 EMILIN3Q9NT22 766 aa9.52□□□□□ -0.89
CBX5-203ENST00000547872 TBC1D12O60347 775 aa9.51□□□□□ -0.89
CBX5-203ENST00000547872 MAP3K9P80192 1104 aa9.5□□□□□ -0.89
CBX5-203ENST00000547872 OXER1Q8TDS5 423 aa9.5□□□□□ -0.89
CBX5-203ENST00000547872 ARHGEF1Q92888 912 aaKnown RBP9.5□□□□□ -0.89
CBX5-203ENST00000547872 PTCD2Q8WV60 388 aaKnown RBP9.49□□□□□ -0.89
CBX5-203ENST00000547872 DPYSL4O14531 572 aa9.48□□□□□ -0.89
CBX5-203ENST00000547872 ZSWIM6Q9HCJ5 1215 aa9.48□□□□□ -0.89
CBX5-203ENST00000547872 PCDHGA4Q9Y5G9 962 aa9.48□□□□□ -0.89
CBX5-203ENST00000547872 ZNF316A6NFI3 1004 aaPredicted RBP9.47□□□□□ -0.89
CBX5-203ENST00000547872 ARIH1Q9Y4X5 557 aaPredicted RBP9.46□□□□□ -0.9
CBX5-203ENST00000547872 NBR1Q14596 966 aa9.44□□□□□ -0.9
CBX5-203ENST00000547872 ARSIQ5FYB1 569 aa9.44□□□□□ -0.9
CBX5-203ENST00000547872 FAM163AQ96GL9 167 aaPredicted RBP9.44□□□□□ -0.9
CBX5-203ENST00000547872 SPDYE16A6NNV3 312 aaPredicted RBP9.43□□□□□ -0.9
CBX5-203ENST00000547872 EVI5O60447 810 aa9.42□□□□□ -0.9
CBX5-203ENST00000547872 GPR153Q6NV75 609 aa9.42□□□□□ -0.9
CBX5-203ENST00000547872 ST18O60284 1047 aa9.41□□□□□ -0.9
CBX5-203ENST00000547872 NUDT7P0C024 238 aa9.41□□□□□ -0.9
CBX5-203ENST00000547872 PDIA6Q15084 440 aa9.41□□□□□ -0.9
CBX5-203ENST00000547872 KHSRPQ92945 711 aaKnown RBP eCLIP9.41□□□□□ -0.9
CBX5-203ENST00000547872 HOXB1P14653 301 aaPredicted RBP9.4□□□□□ -0.9
CBX5-203ENST00000547872 BCANQ96GW7 911 aa9.37□□□□□ -0.91
CBX5-203ENST00000547872 EMP3P54852 163 aa9.35□□□□□ -0.91
CBX5-203ENST00000547872 SEMA3EO15041 775 aa9.34□□□□□ -0.91
CBX5-203ENST00000547872 MARVELD3Q96A59 401 aa9.34□□□□□ -0.91
CBX5-203ENST00000547872 ANO8Q9HCE9 1232 aaPredicted RBP9.34□□□□□ -0.91
CBX5-203ENST00000547872 KDM4FA0A1W2PPD8 638 aa9.33□□□□□ -0.92
CBX5-203ENST00000547872 LHX6Q9UPM6 363 aa9.33□□□□□ -0.92
CBX5-203ENST00000547872 ERBB3P21860 1342 aa9.32□□□□□ -0.92
CBX5-203ENST00000547872 TULP1O00294 542 aaPredicted RBP9.32□□□□□ -0.92
CBX5-203ENST00000547872 DDX12PQ92771 950 aa9.32□□□□□ -0.92
CBX5-203ENST00000547872 PSDA5PKW4 1024 aaPredicted RBP9.31□□□□□ -0.92
CBX5-203ENST00000547872 GRXCR2A6NFK2 248 aa9.31□□□□□ -0.92
CBX5-203ENST00000547872 PTGER2P43116 358 aa9.31□□□□□ -0.92
CBX5-203ENST00000547872 TESPA1A2RU30 521 aaPredicted RBP9.3□□□□□ -0.92
CBX5-203ENST00000547872 LCE2DQ5TA82 110 aaPredicted RBP9.3□□□□□ -0.92
CBX5-203ENST00000547872 SMYD5Q6GMV2 418 aa9.3□□□□□ -0.92
CBX5-203ENST00000547872 ZNF454Q8N9F8 522 aa9.3□□□□□ -0.92
CBX5-203ENST00000547872 JPH4Q96JJ6 628 aa9.3□□□□□ -0.92
CBX5-203ENST00000547872 PHF14O94880 888 aa9.29□□□□□ -0.92
CBX5-203ENST00000547872 MLLT3P42568 568 aaPredicted RBP9.29□□□□□ -0.92
CBX5-203ENST00000547872 FAM205CA6NFA0 338 aa9.28□□□□□ -0.92
CBX5-203ENST00000547872 PPP4R3BQ5MIZ7 849 aa9.28□□□□□ -0.92
CBX5-203ENST00000547872 RB1CC1Q8TDY2 1594 aa9.28□□□□□ -0.92
CBX5-203ENST00000547872 FOSBP53539 338 aa9.27□□□□□ -0.93
CBX5-203ENST00000547872 VARS2Q5ST30 1063 aaKnown RBP9.27□□□□□ -0.93
CBX5-203ENST00000547872 EPAS1Q99814 870 aa9.27□□□□□ -0.93
CBX5-203ENST00000547872 TYW1BQ6NUM6 668 aa9.26□□□□□ -0.93
CBX5-203ENST00000547872 PCDHGA10Q9Y5H3 936 aa9.26□□□□□ -0.93
CBX5-203ENST00000547872 FBXW7Q969H0 707 aa9.25□□□□□ -0.93
CBX5-203ENST00000547872 ZDHHC16Q969W1 377 aa9.25□□□□□ -0.93
CBX5-203ENST00000547872 RBM33Q96EV2 1170 aaKnown RBP9.23□□□□□ -0.93
CBX5-203ENST00000547872 HS3ST6Q96QI5 342 aa9.23□□□□□ -0.93
CBX5-203ENST00000547872 MAP3K7O43318 606 aa9.22□□□□□ -0.93
CBX5-203ENST00000547872 OSBPP22059 807 aa9.22□□□□□ -0.93
CBX5-203ENST00000547872 EN1Q05925 392 aaPredicted RBP9.21□□□□□ -0.94
CBX5-203ENST00000547872 KCNH8Q96L42 1107 aa9.2□□□□□ -0.94
CBX5-203ENST00000547872 ADAM33Q9BZ11 813 aa9.2□□□□□ -0.94
CBX5-203ENST00000547872 POTEGQ6S5H5 508 aa9.19□□□□□ -0.94
CBX5-203ENST00000547872 BCL2L12Q9HB09 334 aa9.19□□□□□ -0.94
CBX5-203ENST00000547872 POTEMA6NI47 508 aa9.18□□□□□ -0.94
CBX5-203ENST00000547872 RBM26Q5T8P6 1007 aaKnown RBP9.18□□□□□ -0.94
CBX5-203ENST00000547872 LMOD2Q6P5Q4 547 aa9.18□□□□□ -0.94
CBX5-203ENST00000547872 DHX30Q7L2E3 1194 aaKnown RBP eCLIP9.18□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms