RNA–Protein interactions for RNA: ENST00000547630.1

C12orf49-203, Transcript of chromosome 12 open reading frame 49, humanhuman

TSL 1 (best)

Gene C12orf49, Length 1,371 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C12orf49-203ENST00000547630 PREX2Q70Z35 1606 aa32.2■■■□□ 2.75
C12orf49-203ENST00000547630 CDC42BPAQ5VT25 1732 aa32.2■■■□□ 2.75
C12orf49-203ENST00000547630 SUPT6HQ7KZ85 1726 aaKnown RBP32.2■■■□□ 2.75
C12orf49-203ENST00000547630 CDC42BPBQ9Y5S2 1711 aa32.2■■■□□ 2.75
C12orf49-203ENST00000547630 CCNB3Q8WWL7 1395 aa32.19■■■□□ 2.74
C12orf49-203ENST00000547630 GPATCH8Q9UKJ3 1502 aaKnown RBP32.17■■■□□ 2.74
C12orf49-203ENST00000547630 NCOA2Q15596 1464 aa32.17■■■□□ 2.74
C12orf49-203ENST00000547630 ADGRL1O94910 1474 aa32.11■■■□□ 2.73
C12orf49-203ENST00000547630 RAPGEF3O95398 923 aa32.1■■■□□ 2.73
C12orf49-203ENST00000547630 CFDP1Q9UEE9 299 aaPredicted RBP32.08■■■□□ 2.73
C12orf49-203ENST00000547630 DENND4BO75064 1496 aaPredicted RBP32.08■■■□□ 2.73
C12orf49-203ENST00000547630 SCAPERQ9BY12 1400 aa32.07■■■□□ 2.73
C12orf49-203ENST00000547630 ZNF777Q9ULD5 760 aaPredicted RBP32.07■■■□□ 2.73
C12orf49-203ENST00000547630 ITSN2Q9NZM3 1697 aa32.06■■■□□ 2.72
C12orf49-203ENST00000547630 FRMPD1Q5SYB0 1578 aa32.02■■■□□ 2.72
C12orf49-203ENST00000547630 SAMD9LQ8IVG5 1584 aa32.01■■■□□ 2.71
C12orf49-203ENST00000547630 RICTORQ6R327 1708 aa32.01■■■□□ 2.71
C12orf49-203ENST00000547630 ABCC1P33527 1531 aa31.99■■■□□ 2.71
C12orf49-203ENST00000547630 POGZQ7Z3K3 1410 aa31.98■■■□□ 2.71
C12orf49-203ENST00000547630 ARHGEF12Q9NZN5 1544 aa31.96■■■□□ 2.71
C12orf49-203ENST00000547630 ZNF644Q9H582 1327 aaPredicted RBP31.94■■■□□ 2.7
C12orf49-203ENST00000547630 MYOM3Q5VTT5 1437 aa31.93■■■□□ 2.7
C12orf49-203ENST00000547630 SYCP2Q9BX26 1530 aa31.91■■■□□ 2.7
C12orf49-203ENST00000547630 PLEKHH2Q8IVE3 1493 aa31.91■■■□□ 2.7
C12orf49-203ENST00000547630 HNRNPMP52272 730 aaKnown RBP eCLIP31.91■■■□□ 2.7
C12orf49-203ENST00000547630 PPARGC1BQ86YN6 1023 aaKnown RBP31.91■■■□□ 2.7
C12orf49-203ENST00000547630 AFAP1Q8N556 730 aa31.91■■■□□ 2.7
C12orf49-203ENST00000547630 ZNF518AQ6AHZ1 1483 aa31.9■■■□□ 2.7
C12orf49-203ENST00000547630 TRAPPC8Q9Y2L5 1435 aa31.9■■■□□ 2.7
C12orf49-203ENST00000547630 KIAA1107Q9UPP5 1409 aa31.88■■■□□ 2.69
C12orf49-203ENST00000547630 ZMYM4Q5VZL5 1548 aa31.88■■■□□ 2.69
C12orf49-203ENST00000547630 CAMSAP2Q08AD1 1489 aa31.86■■■□□ 2.69
C12orf49-203ENST00000547630 MIA2Q96PC5 1412 aa31.85■■■□□ 2.69
C12orf49-203ENST00000547630 KDM5CP41229 1560 aa31.84■■■□□ 2.69
C12orf49-203ENST00000547630 MAGI2Q86UL8 1455 aa31.81■■■□□ 2.68
C12orf49-203ENST00000547630 MYT1LQ9UL68 1186 aa31.8■■■□□ 2.68
C12orf49-203ENST00000547630 YEATS2Q9ULM3 1422 aa31.79■■■□□ 2.68
C12orf49-203ENST00000547630 MBD5Q9P267 1494 aa31.79■■■□□ 2.68
C12orf49-203ENST00000547630 ZFYVE16Q7Z3T8 1539 aa31.79■■■□□ 2.68
C12orf49-203ENST00000547630 ARHGEF40Q8TER5 1519 aa31.77■■■□□ 2.68
C12orf49-203ENST00000547630 FGD6Q6ZV73 1430 aa31.77■■■□□ 2.68
C12orf49-203ENST00000547630 HECW2Q9P2P5 1572 aa31.76■■■□□ 2.67
C12orf49-203ENST00000547630 PTPN23Q9H3S7 1636 aa31.74■■■□□ 2.67
C12orf49-203ENST00000547630 MLH3Q9UHC1 1453 aa31.74■■■□□ 2.67
C12orf49-203ENST00000547630 SPAG9O60271 1321 aaKnown RBP31.72■■■□□ 2.67
C12orf49-203ENST00000547630 CCDC141Q6ZP82 1450 aa31.7■■■□□ 2.67
C12orf49-203ENST00000547630 RSPH4AQ5TD94 716 aa31.69■■■□□ 2.66
C12orf49-203ENST00000547630 ARHGEF5Q12774 1597 aa31.69■■■□□ 2.66
C12orf49-203ENST00000547630 KIDINS220Q9ULH0 1771 aa31.68■■■□□ 2.66
C12orf49-203ENST00000547630 TCOF1Q13428 1488 aaKnown RBP31.68■■■□□ 2.66
C12orf49-203ENST00000547630 ATP10AO60312 1499 aa31.66■■■□□ 2.66
C12orf49-203ENST00000547630 ABCA6Q8N139 1617 aa31.65■■■□□ 2.66
C12orf49-203ENST00000547630 DIP2CQ9Y2E4 1556 aa31.65■■■□□ 2.66
C12orf49-203ENST00000547630 ATP7AQ04656 1500 aa31.64■■■□□ 2.66
C12orf49-203ENST00000547630 INO80Q9ULG1 1556 aaPredicted RBP31.63■■■□□ 2.65
C12orf49-203ENST00000547630 ARID4BQ4LE39 1312 aaPredicted RBP31.61■■■□□ 2.65
C12orf49-203ENST00000547630 FAM50AQ14320 339 aaKnown RBP31.61■■■□□ 2.65
C12orf49-203ENST00000547630 C9orf84Q5VXU9 1444 aa31.61■■■□□ 2.65
C12orf49-203ENST00000547630 TSPY4P0CV99 314 aa31.6■■■□□ 2.65
C12orf49-203ENST00000547630 TSPY10P0CW01 314 aa31.6■■■□□ 2.65
C12orf49-203ENST00000547630 RTEL1-TNFRSF6BF6WH68 1400 aa31.59■■■□□ 2.65
C12orf49-203ENST00000547630 SIGLEC1Q9BZZ2 1709 aa31.58■■■□□ 2.65
C12orf49-203ENST00000547630 ABCC5O15440 1437 aa31.55■■■□□ 2.64
C12orf49-203ENST00000547630 DNMT1P26358 1616 aaKnown RBP31.53■■■□□ 2.64
C12orf49-203ENST00000547630 KDM4FA0A1W2PPD8 638 aa31.53■■■□□ 2.64
C12orf49-203ENST00000547630 DAPK1P53355 1430 aa31.53■■■□□ 2.64
C12orf49-203ENST00000547630 REREQ9P2R6 1566 aa31.52■■■□□ 2.64
C12orf49-203ENST00000547630 MAST1Q9Y2H9 1570 aa31.51■■■□□ 2.64
C12orf49-203ENST00000547630 CROCC2H7BZ55 1655 aa31.49■■■□□ 2.63
C12orf49-203ENST00000547630 A2MP01023 1474 aa31.47■■■□□ 2.63
C12orf49-203ENST00000547630 ADGBQ8N7X0 1667 aa31.47■■■□□ 2.63
C12orf49-203ENST00000547630 BCORL1Q5H9F3 1711 aa31.47■■■□□ 2.63
C12orf49-203ENST00000547630 MLECQ14165 292 aa31.46■■■□□ 2.63
C12orf49-203ENST00000547630 SHANK2Q9UPX8 1470 aa31.46■■■□□ 2.63
C12orf49-203ENST00000547630 RRBP1Q9P2E9 1410 aaKnown RBP31.44■■■□□ 2.62
C12orf49-203ENST00000547630 AGLP35573 1532 aa31.43■■■□□ 2.62
C12orf49-203ENST00000547630 CHIC2Q9UKJ5 165 aa31.43■■■□□ 2.62
C12orf49-203ENST00000547630 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP31.41■■■□□ 2.62
C12orf49-203ENST00000547630 PLXNC1O60486 1568 aa31.41■■■□□ 2.62
C12orf49-203ENST00000547630 DHX29Q7Z478 1369 aaKnown RBP31.4■■■□□ 2.62
C12orf49-203ENST00000547630 ADAMTSL3P82987 1691 aa31.4■■■□□ 2.62
C12orf49-203ENST00000547630 ITGAEP38570 1179 aa31.35■■■□□ 2.61
C12orf49-203ENST00000547630 PTPRKQ15262 1439 aa31.34■■■□□ 2.61
C12orf49-203ENST00000547630 RRP7BPQ9NSQ0 103 aa31.34■■■□□ 2.61
C12orf49-203ENST00000547630 MADDQ8WXG6 1647 aa31.34■■■□□ 2.61
C12orf49-203ENST00000547630 ANKRD30AQ9BXX3 1397 aa31.32■■■□□ 2.6
C12orf49-203ENST00000547630 KIF15Q9NS87 1388 aa31.32■■■□□ 2.6
C12orf49-203ENST00000547630 ADGRL2O95490 1459 aa31.3■■■□□ 2.6
C12orf49-203ENST00000547630 AEBP2Q6ZN18 517 aaPredicted RBP31.3■■■□□ 2.6
C12orf49-203ENST00000547630 NCOA1Q15788 1441 aa31.3■■■□□ 2.6
C12orf49-203ENST00000547630 DUOX2Q9NRD8 1548 aa31.29■■■□□ 2.6
C12orf49-203ENST00000547630 KIF3BO15066 747 aa31.29■■■□□ 2.6
C12orf49-203ENST00000547630 GGT6Q6P531 493 aa31.27■■■□□ 2.6
C12orf49-203ENST00000547630 FER1L4A9Z1Z3 1794 aa31.27■■■□□ 2.6
C12orf49-203ENST00000547630 RIMS1Q86UR5 1692 aaKnown RBP31.26■■■□□ 2.59
C12orf49-203ENST00000547630 PTPRMP28827 1452 aa31.21■■■□□ 2.59
C12orf49-203ENST00000547630 ESF1Q9H501 851 aaKnown RBP31.2■■■□□ 2.59
C12orf49-203ENST00000547630 ERBINQ96RT1 1412 aa31.2■■■□□ 2.58
C12orf49-203ENST00000547630 ROCK1Q13464 1354 aa31.19■■■□□ 2.58
C12orf49-203ENST00000547630 EIF2AK4Q9P2K8 1649 aaKnown RBP31.19■■■□□ 2.58
Retrieved 100 of 20,778 RNA–protein pairs in 63.8 ms