RNA–Protein interactions for RNA: ENST00000547539.1

FAM216A-204, Transcript of family with sequence similarity 216 member A, humanhuman

TSL 2

Gene FAM216A, Length 1,384 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FAM216A-204ENST00000547539 C2orf72A6NCS6 295 aa12.31□□□□□ -0.44
FAM216A-204ENST00000547539 ST18O60284 1047 aa12.3□□□□□ -0.44
FAM216A-204ENST00000547539 RYDENQ9NUL5 291 aaKnown RBP12.3□□□□□ -0.44
FAM216A-204ENST00000547539 HOXB3P14651 431 aaPredicted RBP12.28□□□□□ -0.44
FAM216A-204ENST00000547539 KIF3CO14782 793 aa12.26□□□□□ -0.45
FAM216A-204ENST00000547539 CFAP44Q96MT7 982 aa12.26□□□□□ -0.45
FAM216A-204ENST00000547539 SNPHO15079 494 aa12.25□□□□□ -0.45
FAM216A-204ENST00000547539 TMC2Q8TDI7 906 aa12.25□□□□□ -0.45
FAM216A-204ENST00000547539 PAXIP1Q6ZW49 1069 aaPredicted RBP12.24□□□□□ -0.45
FAM216A-204ENST00000547539 POTEMA6NI47 508 aa12.23□□□□□ -0.45
FAM216A-204ENST00000547539 MARVELD3Q96A59 401 aa12.23□□□□□ -0.45
FAM216A-204ENST00000547539 ZBTB4Q9P1Z0 1013 aaPredicted RBP12.23□□□□□ -0.45
FAM216A-204ENST00000547539 POTEGQ6S5H5 508 aa12.22□□□□□ -0.45
FAM216A-204ENST00000547539 CADPS2Q86UW7 1296 aa12.21□□□□□ -0.45
FAM216A-204ENST00000547539 SPRYD3Q8NCJ5 442 aa12.2□□□□□ -0.46
FAM216A-204ENST00000547539 RB1CC1Q8TDY2 1594 aa12.2□□□□□ -0.46
FAM216A-204ENST00000547539 ZNF710Q8N1W2 664 aa12.18□□□□□ -0.46
FAM216A-204ENST00000547539 NCKAP5LQ9HCH0 1330 aa12.18□□□□□ -0.46
FAM216A-204ENST00000547539 DOK7Q18PE1 504 aa12.18□□□□□ -0.46
FAM216A-204ENST00000547539 DSG2Q14126 1118 aa12.17□□□□□ -0.46
FAM216A-204ENST00000547539 GPHNQ9NQX3 736 aaPredicted RBP12.16□□□□□ -0.46
FAM216A-204ENST00000547539 KHSRPQ92945 711 aaKnown RBP eCLIP12.15□□□□□ -0.46
FAM216A-204ENST00000547539 CRISPLD2Q9H0B8 497 aa12.15□□□□□ -0.46
FAM216A-204ENST00000547539 PLPP6Q8IY26 295 aa12.14□□□□□ -0.47
FAM216A-204ENST00000547539 EMP3P54852 163 aa12.11□□□□□ -0.47
FAM216A-204ENST00000547539 FOXK1P85037 733 aa12.11□□□□□ -0.47
FAM216A-204ENST00000547539 ARSIQ5FYB1 569 aa12.11□□□□□ -0.47
FAM216A-204ENST00000547539 LARP6Q9BRS8 491 aaKnown RBP12.11□□□□□ -0.47
FAM216A-204ENST00000547539 RIMBP2O15034 1052 aa12.09□□□□□ -0.47
FAM216A-204ENST00000547539 HOXB1P14653 301 aaPredicted RBP12.08□□□□□ -0.48
FAM216A-204ENST00000547539 GPR153Q6NV75 609 aa12.08□□□□□ -0.48
FAM216A-204ENST00000547539 FAM205CA6NFA0 338 aa12.07□□□□□ -0.48
FAM216A-204ENST00000547539 PDE4AP27815 886 aa12.07□□□□□ -0.48
FAM216A-204ENST00000547539 PPP1R15BQ5SWA1 713 aa12.07□□□□□ -0.48
FAM216A-204ENST00000547539 NACADO15069 1562 aa12.06□□□□□ -0.48
FAM216A-204ENST00000547539 POTEB3A0JP26 581 aa12.05□□□□□ -0.48
FAM216A-204ENST00000547539 POTEBQ6S5H4 581 aa12.05□□□□□ -0.48
FAM216A-204ENST00000547539 UPF1Q92900 1129 aaKnown RBP eCLIP12.05□□□□□ -0.48
FAM216A-204ENST00000547539 PCDHGA4Q9Y5G9 962 aa12.04□□□□□ -0.48
FAM216A-204ENST00000547539 NUDT7P0C024 238 aa12.03□□□□□ -0.48
FAM216A-204ENST00000547539 DDX27Q96GQ7 796 aaKnown RBP12.03□□□□□ -0.48
FAM216A-204ENST00000547539 HS3ST6Q96QI5 342 aa12.02□□□□□ -0.49
FAM216A-204ENST00000547539 ZSWIM6Q9HCJ5 1215 aa12.02□□□□□ -0.49
FAM216A-204ENST00000547539 TSHZ2Q9NRE2 1034 aa12.01□□□□□ -0.49
FAM216A-204ENST00000547539 SLC34A2O95436 690 aa12□□□□□ -0.49
FAM216A-204ENST00000547539 ERBB3P21860 1342 aa11.99□□□□□ -0.49
FAM216A-204ENST00000547539 MFSD10Q14728 455 aa11.99□□□□□ -0.49
FAM216A-204ENST00000547539 CDAN1Q8IWY9 1227 aa11.99□□□□□ -0.49
FAM216A-204ENST00000547539 VARS2Q5ST30 1063 aaKnown RBP11.97□□□□□ -0.49
FAM216A-204ENST00000547539 PTCD2Q8WV60 388 aaKnown RBP11.96□□□□□ -0.49
FAM216A-204ENST00000547539 OXER1Q8TDS5 423 aa11.93□□□□□ -0.5
FAM216A-204ENST00000547539 EMILIN3Q9NT22 766 aa11.93□□□□□ -0.5
FAM216A-204ENST00000547539 LHX6Q9UPM6 363 aa11.92□□□□□ -0.5
FAM216A-204ENST00000547539 UNC13AQ9UPW8 1703 aa11.92□□□□□ -0.5
FAM216A-204ENST00000547539 ZNF316A6NFI3 1004 aaPredicted RBP11.92□□□□□ -0.5
FAM216A-204ENST00000547539 PLCB2Q00722 1185 aa11.92□□□□□ -0.5
FAM216A-204ENST00000547539 KDM4FA0A1W2PPD8 638 aa11.89□□□□□ -0.51
FAM216A-204ENST00000547539 TBC1D12O60347 775 aa11.86□□□□□ -0.51
FAM216A-204ENST00000547539 KRTAP3-3Q9BYR6 98 aa11.85□□□□□ -0.51
FAM216A-204ENST00000547539 KRTAP3-2Q9BYR7 98 aa11.85□□□□□ -0.51
FAM216A-204ENST00000547539 MYO15BQ96JP2 1530 aa11.85□□□□□ -0.51
FAM216A-204ENST00000547539 BICRAQ9NZM4 1560 aa11.85□□□□□ -0.51
FAM216A-204ENST00000547539 MAP3K9P80192 1104 aa11.84□□□□□ -0.51
FAM216A-204ENST00000547539 DPYSL4O14531 572 aa11.83□□□□□ -0.52
FAM216A-204ENST00000547539 CAMK2BQ13554 666 aa11.83□□□□□ -0.52
FAM216A-204ENST00000547539 WDR70Q9NW82 654 aa11.83□□□□□ -0.52
FAM216A-204ENST00000547539 PCDH10Q9P2E7 1040 aa11.83□□□□□ -0.52
FAM216A-204ENST00000547539 EVI5O60447 810 aa11.82□□□□□ -0.52
FAM216A-204ENST00000547539 HAP1P54257 671 aaPredicted RBP11.82□□□□□ -0.52
FAM216A-204ENST00000547539 ZNF687Q8N1G0 1237 aa11.8□□□□□ -0.52
FAM216A-204ENST00000547539 AXIN2Q9Y2T1 843 aa11.79□□□□□ -0.52
FAM216A-204ENST00000547539 E2F4Q16254 413 aa11.79□□□□□ -0.52
FAM216A-204ENST00000547539 POTEEQ6S8J3 1075 aa11.79□□□□□ -0.52
FAM216A-204ENST00000547539 ZNF454Q8N9F8 522 aa11.76□□□□□ -0.53
FAM216A-204ENST00000547539 SHROOM4Q9ULL8 1493 aa11.73□□□□□ -0.53
FAM216A-204ENST00000547539 ANO8Q9HCE9 1232 aaPredicted RBP11.72□□□□□ -0.53
FAM216A-204ENST00000547539 PPP4R3BQ5MIZ7 849 aa11.71□□□□□ -0.53
FAM216A-204ENST00000547539 PSEN2P49810 448 aa11.7□□□□□ -0.54
FAM216A-204ENST00000547539 FOSBP53539 338 aa11.69□□□□□ -0.54
FAM216A-204ENST00000547539 KCNV2Q8TDN2 545 aa11.69□□□□□ -0.54
FAM216A-204ENST00000547539 ANKRD13DQ6ZTN6 518 aa11.68□□□□□ -0.54
FAM216A-204ENST00000547539 DDX12PQ92771 950 aa11.68□□□□□ -0.54
FAM216A-204ENST00000547539 PSDA5PKW4 1024 aaPredicted RBP11.67□□□□□ -0.54
FAM216A-204ENST00000547539 SPNS2Q8IVW8 549 aa11.67□□□□□ -0.54
FAM216A-204ENST00000547539 DMRTA1Q5VZB9 504 aa11.67□□□□□ -0.54
FAM216A-204ENST00000547539 KCNK17Q96T54 332 aa11.67□□□□□ -0.54
FAM216A-204ENST00000547539 PCDHGA10Q9Y5H3 936 aa11.67□□□□□ -0.54
FAM216A-204ENST00000547539 JPH4Q96JJ6 628 aa11.66□□□□□ -0.54
FAM216A-204ENST00000547539 ADAM33Q9BZ11 813 aa11.66□□□□□ -0.54
FAM216A-204ENST00000547539 KDM2AQ9Y2K7 1162 aa11.66□□□□□ -0.54
FAM216A-204ENST00000547539 LSM11P83369 360 aaKnown RBP eCLIP11.65□□□□□ -0.55
FAM216A-204ENST00000547539 PDIA6Q15084 440 aa11.65□□□□□ -0.55
FAM216A-204ENST00000547539 CC2D2AQ9P2K1 1620 aa11.64□□□□□ -0.55
FAM216A-204ENST00000547539 CECR2Q9BXF3 1484 aa11.64□□□□□ -0.55
FAM216A-204ENST00000547539 ARHGAP33O14559 1287 aa11.63□□□□□ -0.55
FAM216A-204ENST00000547539 ZDHHC16Q969W1 377 aa11.63□□□□□ -0.55
FAM216A-204ENST00000547539 PBX2P40425 430 aa11.62□□□□□ -0.55
FAM216A-204ENST00000547539 RBM33Q96EV2 1170 aaKnown RBP11.61□□□□□ -0.55
FAM216A-204ENST00000547539 GRXCR2A6NFK2 248 aa11.6□□□□□ -0.55
FAM216A-204ENST00000547539 BCL2L12Q9HB09 334 aa11.6□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 50.6 ms