RNA–Protein interactions for RNA: ENST00000547230.5

CACNB3-204, Transcript of calcium voltage-gated channel auxiliary subunit beta 3, humanhuman

TSL 3 BASIC

Gene CACNB3, Length 2,395 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNB3-204ENST00000547230 MIA2Q96PC5 1412 aa17.47■□□□□ 0.39
CACNB3-204ENST00000547230 POLR1AO95602 1720 aaPredicted RBP17.46■□□□□ 0.39
CACNB3-204ENST00000547230 TEX14Q8IWB6 1497 aa17.45■□□□□ 0.38
CACNB3-204ENST00000547230 FAM9BQ8IZU0 186 aa17.45■□□□□ 0.38
CACNB3-204ENST00000547230 WDR62O43379 1518 aa17.45■□□□□ 0.38
CACNB3-204ENST00000547230 TARBP1Q13395 1621 aaKnown RBP17.44■□□□□ 0.38
CACNB3-204ENST00000547230 RPRD2Q5VT52 1461 aaKnown RBP17.44■□□□□ 0.38
CACNB3-204ENST00000547230 NBPF8Q3BBV2 869 aa17.44■□□□□ 0.38
CACNB3-204ENST00000547230 MRS2Q9HD23 443 aa17.44■□□□□ 0.38
CACNB3-204ENST00000547230 IQGAP2Q13576 1575 aa17.44■□□□□ 0.38
CACNB3-204ENST00000547230 ZBED9Q6R2W3 1325 aa17.43■□□□□ 0.38
CACNB3-204ENST00000547230 ANKRD30BQ9BXX2 1392 aa17.43■□□□□ 0.38
CACNB3-204ENST00000547230 PBRM1Q86U86 1689 aa17.42■□□□□ 0.38
CACNB3-204ENST00000547230 SPATA31E1Q6ZUB1 1445 aa17.4■□□□□ 0.38
CACNB3-204ENST00000547230 KIF7Q2M1P5 1343 aa17.4■□□□□ 0.38
CACNB3-204ENST00000547230 DAPK1P53355 1430 aa17.4■□□□□ 0.38
CACNB3-204ENST00000547230 ARID3CA6NKF2 412 aa17.39■□□□□ 0.38
CACNB3-204ENST00000547230 B4GALNT3Q6L9W6 998 aa17.39■□□□□ 0.37
CACNB3-204ENST00000547230 DNMT1P26358 1616 aaKnown RBP17.39■□□□□ 0.37
CACNB3-204ENST00000547230 ERICH6Q7L0X2 663 aa17.38■□□□□ 0.37
CACNB3-204ENST00000547230 ROCK1Q13464 1354 aa17.38■□□□□ 0.37
CACNB3-204ENST00000547230 ADAMTS12P58397 1594 aa17.37■□□□□ 0.37
CACNB3-204ENST00000547230 PDS5BQ9NTI5 1447 aa17.37■□□□□ 0.37
CACNB3-204ENST00000547230 ABCC5O15440 1437 aa17.36■□□□□ 0.37
CACNB3-204ENST00000547230 ZNF644Q9H582 1327 aaPredicted RBP17.31■□□□□ 0.36
CACNB3-204ENST00000547230 SLC4A1APQ9BWU0 796 aaKnown RBP17.31■□□□□ 0.36
CACNB3-204ENST00000547230 DHX29Q7Z478 1369 aaKnown RBP17.3■□□□□ 0.36
CACNB3-204ENST00000547230 BCORL1Q5H9F3 1711 aa17.3■□□□□ 0.36
CACNB3-204ENST00000547230 PZPP20742 1482 aa17.3■□□□□ 0.36
CACNB3-204ENST00000547230 MBD5Q9P267 1494 aa17.29■□□□□ 0.36
CACNB3-204ENST00000547230 SMG6Q86US8 1419 aaKnown RBP17.29■□□□□ 0.36
CACNB3-204ENST00000547230 NUP153P49790 1475 aaKnown RBP17.26■□□□□ 0.35
CACNB3-204ENST00000547230 KIAA0556O60303 1618 aa17.26■□□□□ 0.35
CACNB3-204ENST00000547230 ADGBQ8N7X0 1667 aa17.24■□□□□ 0.35
CACNB3-204ENST00000547230 KIF14Q15058 1648 aa17.24■□□□□ 0.35
CACNB3-204ENST00000547230 RAPGEF6Q8TEU7 1601 aa17.24■□□□□ 0.35
CACNB3-204ENST00000547230 DISP1Q96F81 1524 aa17.24■□□□□ 0.35
CACNB3-204ENST00000547230 USP47Q96K76 1375 aa17.23■□□□□ 0.35
CACNB3-204ENST00000547230 CNGB1Q14028 1251 aaPredicted RBP17.23■□□□□ 0.35
CACNB3-204ENST00000547230 KDM5CP41229 1560 aa17.23■□□□□ 0.35
CACNB3-204ENST00000547230 NUDCQ9Y266 331 aa17.22■□□□□ 0.35
CACNB3-204ENST00000547230 CAMSAP2Q08AD1 1489 aa17.22■□□□□ 0.35
CACNB3-204ENST00000547230 RNF123Q5XPI4 1314 aa17.21■□□□□ 0.35
CACNB3-204ENST00000547230 KIAA1107Q9UPP5 1409 aa17.2■□□□□ 0.34
CACNB3-204ENST00000547230 POLR3GLQ9BT43 218 aa17.2■□□□□ 0.34
CACNB3-204ENST00000547230 CROCC2H7BZ55 1655 aa17.19■□□□□ 0.34
CACNB3-204ENST00000547230 ZNF326Q5BKZ1 582 aaKnown RBP17.18■□□□□ 0.34
CACNB3-204ENST00000547230 ITSN2Q9NZM3 1697 aa17.18■□□□□ 0.34
CACNB3-204ENST00000547230 NOP58Q9Y2X3 529 aaKnown RBP17.18■□□□□ 0.34
CACNB3-204ENST00000547230 MYT1LQ9UL68 1186 aa17.17■□□□□ 0.34
CACNB3-204ENST00000547230 KIAA0586Q9BVV6 1533 aa17.17■□□□□ 0.34
CACNB3-204ENST00000547230 PRG4Q92954 1404 aaPredicted RBP17.17■□□□□ 0.34
CACNB3-204ENST00000547230 ADGRL2O95490 1459 aa17.16■□□□□ 0.34
CACNB3-204ENST00000547230 SENP3-EIF4A1A0A087X0R7 540 aa17.16■□□□□ 0.34
CACNB3-204ENST00000547230 PAK3O75914 559 aaPredicted RBP17.15■□□□□ 0.34
CACNB3-204ENST00000547230 TROQ12816 1431 aaPredicted RBP17.15■□□□□ 0.34
CACNB3-204ENST00000547230 CCDC136Q96JN2 1154 aa17.15■□□□□ 0.34
CACNB3-204ENST00000547230 ZNF608Q9ULD9 1512 aaPredicted RBP17.14■□□□□ 0.33
CACNB3-204ENST00000547230 PKD2Q13563 968 aa17.14■□□□□ 0.33
CACNB3-204ENST00000547230 ARID4BQ4LE39 1312 aaPredicted RBP17.14■□□□□ 0.33
CACNB3-204ENST00000547230 RALGAPBQ86X10 1494 aa17.13■□□□□ 0.33
CACNB3-204ENST00000547230 GPATCH8Q9UKJ3 1502 aaKnown RBP17.13■□□□□ 0.33
CACNB3-204ENST00000547230 PNISRQ8TF01 805 aaKnown RBP17.13■□□□□ 0.33
CACNB3-204ENST00000547230 DEKP35659 375 aaKnown RBP17.13■□□□□ 0.33
CACNB3-204ENST00000547230 CFDP1Q9UEE9 299 aaPredicted RBP17.13■□□□□ 0.33
CACNB3-204ENST00000547230 MRC2Q9UBG0 1479 aa17.12■□□□□ 0.33
CACNB3-204ENST00000547230 ADCY10Q96PN6 1610 aa17.12■□□□□ 0.33
CACNB3-204ENST00000547230 UHRF1BP1Q6BDS2 1440 aa17.11■□□□□ 0.33
CACNB3-204ENST00000547230 ROCK2O75116 1388 aaKnown RBP17.1■□□□□ 0.33
CACNB3-204ENST00000547230 ZNF777Q9ULD5 760 aaPredicted RBP17.09■□□□□ 0.33
CACNB3-204ENST00000547230 TMC1Q8TDI8 760 aa17.08■□□□□ 0.33
CACNB3-204ENST00000547230 LRPPRCP42704 1394 aaKnown RBP17.08■□□□□ 0.32
CACNB3-204ENST00000547230 ANKRD30AQ9BXX3 1397 aa17.08■□□□□ 0.32
CACNB3-204ENST00000547230 GRIN2AQ12879 1464 aa17.08■□□□□ 0.32
CACNB3-204ENST00000547230 NBR1Q14596 966 aa17.08■□□□□ 0.32
CACNB3-204ENST00000547230 ANKRD50Q9ULJ7 1429 aa17.08■□□□□ 0.32
CACNB3-204ENST00000547230 E9PCH4 1651 aa17.07■□□□□ 0.32
CACNB3-204ENST00000547230 KIF15Q9NS87 1388 aa17.07■□□□□ 0.32
CACNB3-204ENST00000547230 ARHGEF12Q9NZN5 1544 aa17.07■□□□□ 0.32
CACNB3-204ENST00000547230 PLB1Q6P1J6 1458 aa17.07■□□□□ 0.32
CACNB3-204ENST00000547230 IFT140Q96RY7 1462 aa17.06■□□□□ 0.32
CACNB3-204ENST00000547230 CARD11Q9BXL7 1154 aa17.06■□□□□ 0.32
CACNB3-204ENST00000547230 CDC42BPAQ5VT25 1732 aa17.05■□□□□ 0.32
CACNB3-204ENST00000547230 ANP32AP39687 249 aaKnown RBP17.05■□□□□ 0.32
CACNB3-204ENST00000547230 IPO9Q96P70 1041 aaKnown RBP17.04■□□□□ 0.32
CACNB3-204ENST00000547230 ERCC6Q03468 1493 aa17.04■□□□□ 0.32
CACNB3-204ENST00000547230 BRD4O60885 1362 aaPredicted RBP17.03■□□□□ 0.32
CACNB3-204ENST00000547230 CEP170Q5SW79 1584 aa17.02■□□□□ 0.32
CACNB3-204ENST00000547230 MYBBP1AQ9BQG0 1328 aaKnown RBP17.02■□□□□ 0.32
CACNB3-204ENST00000547230 NUP155O75694 1391 aa17.02■□□□□ 0.32
CACNB3-204ENST00000547230 EIF4G3O43432 1585 aaKnown RBP17.02■□□□□ 0.31
CACNB3-204ENST00000547230 KDM5DQ9BY66 1539 aa17.02■□□□□ 0.31
CACNB3-204ENST00000547230 ST20-MTHFSA0A0A6YYL1 179 aa17.01■□□□□ 0.31
CACNB3-204ENST00000547230 SHANK2Q9UPX8 1470 aa17■□□□□ 0.31
CACNB3-204ENST00000547230 RRP1P56182 461 aaKnown RBP17■□□□□ 0.31
CACNB3-204ENST00000547230 C9orf84Q5VXU9 1444 aa17■□□□□ 0.31
CACNB3-204ENST00000547230 KTN1Q86UP2 1357 aaKnown RBP16.99■□□□□ 0.31
CACNB3-204ENST00000547230 RALBP1Q15311 655 aa16.99■□□□□ 0.31
CACNB3-204ENST00000547230 KDM2AQ9Y2K7 1162 aa16.99■□□□□ 0.31
CACNB3-204ENST00000547230 PRKCSHP14314 528 aaPredicted RBP16.98■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 40 ms