RNA–Protein interactions for RNA: ENST00000546997.1

BRF1-208, Transcript of BRF1, RNA polymerase III transcription initiation factor subunit, humanhuman

TSL 2

Gene BRF1, Length 1,999 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRF1-208ENST00000546997 MIA2Q96PC5 1412 aa24.59■■□□□ 1.53
BRF1-208ENST00000546997 CDC42BPBQ9Y5S2 1711 aa24.57■■□□□ 1.52
BRF1-208ENST00000546997 PREX2Q70Z35 1606 aa24.56■■□□□ 1.52
BRF1-208ENST00000546997 MYO5CQ9NQX4 1742 aa24.56■■□□□ 1.52
BRF1-208ENST00000546997 TCOF1Q13428 1488 aaKnown RBP24.56■■□□□ 1.52
BRF1-208ENST00000546997 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP24.55■■□□□ 1.52
BRF1-208ENST00000546997 MAPKBP1O60336 1514 aa24.53■■□□□ 1.52
BRF1-208ENST00000546997 ITGAEP38570 1179 aa24.53■■□□□ 1.52
BRF1-208ENST00000546997 CFDP1Q9UEE9 299 aaPredicted RBP24.51■■□□□ 1.51
BRF1-208ENST00000546997 ZNF644Q9H582 1327 aaPredicted RBP24.51■■□□□ 1.51
BRF1-208ENST00000546997 ABCA9Q8IUA7 1624 aa24.51■■□□□ 1.51
BRF1-208ENST00000546997 CAMSAP2Q08AD1 1489 aa24.49■■□□□ 1.51
BRF1-208ENST00000546997 CCER1Q8TC90 406 aaPredicted RBP24.48■■□□□ 1.51
BRF1-208ENST00000546997 ARHGAP5Q13017 1502 aa24.45■■□□□ 1.5
BRF1-208ENST00000546997 ZNF777Q9ULD5 760 aaPredicted RBP24.45■■□□□ 1.5
BRF1-208ENST00000546997 SAMD9LQ8IVG5 1584 aa24.44■■□□□ 1.5
BRF1-208ENST00000546997 PTPRKQ15262 1439 aa24.44■■□□□ 1.5
BRF1-208ENST00000546997 CENPBP07199 599 aaPredicted RBP24.42■■□□□ 1.5
BRF1-208ENST00000546997 PLCH2O75038 1416 aa24.42■■□□□ 1.5
BRF1-208ENST00000546997 DNMT1P26358 1616 aaKnown RBP24.42■■□□□ 1.5
BRF1-208ENST00000546997 ARAP3Q8WWN8 1544 aa24.37■■□□□ 1.49
BRF1-208ENST00000546997 DAPK1P53355 1430 aa24.36■■□□□ 1.49
BRF1-208ENST00000546997 CROCC2H7BZ55 1655 aa24.36■■□□□ 1.49
BRF1-208ENST00000546997 ABCC5O15440 1437 aa24.35■■□□□ 1.49
BRF1-208ENST00000546997 NEUROD1Q13562 356 aa24.34■■□□□ 1.49
BRF1-208ENST00000546997 DIP2BQ9P265 1576 aa24.34■■□□□ 1.49
BRF1-208ENST00000546997 SYCP2Q9BX26 1530 aa24.33■■□□□ 1.49
BRF1-208ENST00000546997 MBD5Q9P267 1494 aa24.31■■□□□ 1.48
BRF1-208ENST00000546997 MAP3K4Q9Y6R4 1608 aa24.31■■□□□ 1.48
BRF1-208ENST00000546997 FANCAO15360 1455 aa24.31■■□□□ 1.48
BRF1-208ENST00000546997 GLI2P10070 1586 aa24.31■■□□□ 1.48
BRF1-208ENST00000546997 ARHGEF5Q12774 1597 aa24.3■■□□□ 1.48
BRF1-208ENST00000546997 CD109Q6YHK3 1445 aa24.3■■□□□ 1.48
BRF1-208ENST00000546997 ABCC1P33527 1531 aa24.29■■□□□ 1.48
BRF1-208ENST00000546997 EFCAB2Q5VUJ9 269 aa24.29■■□□□ 1.48
BRF1-208ENST00000546997 PLPPR3Q6T4P5 718 aa24.29■■□□□ 1.48
BRF1-208ENST00000546997 CHIC2Q9UKJ5 165 aa24.29■■□□□ 1.48
BRF1-208ENST00000546997 ARHGEF12Q9NZN5 1544 aa24.28■■□□□ 1.48
BRF1-208ENST00000546997 KIF13AQ9H1H9 1805 aa24.28■■□□□ 1.48
BRF1-208ENST00000546997 HNRNPMP52272 730 aaKnown RBP eCLIP24.28■■□□□ 1.48
BRF1-208ENST00000546997 PLEKHH2Q8IVE3 1493 aa24.26■■□□□ 1.47
BRF1-208ENST00000546997 ADGBQ8N7X0 1667 aa24.26■■□□□ 1.47
BRF1-208ENST00000546997 KIAA1107Q9UPP5 1409 aa24.25■■□□□ 1.47
BRF1-208ENST00000546997 HFM1A2PYH4 1435 aa24.24■■□□□ 1.47
BRF1-208ENST00000546997 AKNAQ7Z591 1439 aa24.24■■□□□ 1.47
BRF1-208ENST00000546997 CCDC141Q6ZP82 1450 aa24.24■■□□□ 1.47
BRF1-208ENST00000546997 GCC2Q8IWJ2 1684 aa24.24■■□□□ 1.47
BRF1-208ENST00000546997 SETD5Q9C0A6 1442 aa24.23■■□□□ 1.47
BRF1-208ENST00000546997 FAM69CQ0P6D2 419 aa24.23■■□□□ 1.47
BRF1-208ENST00000546997 SHANK2Q9UPX8 1470 aa24.22■■□□□ 1.47
BRF1-208ENST00000546997 DIEXFQ68CQ4 756 aaKnown RBP24.22■■□□□ 1.47
BRF1-208ENST00000546997 RAB3GAP2Q9H2M9 1393 aa24.22■■□□□ 1.47
BRF1-208ENST00000546997 NAIPQ13075 1403 aa24.22■■□□□ 1.47
BRF1-208ENST00000546997 TSPOAP1O95153 1857 aa24.21■■□□□ 1.47
BRF1-208ENST00000546997 CFAP74Q9C0B2 1584 aa24.21■■□□□ 1.47
BRF1-208ENST00000546997 RRP7BPQ9NSQ0 103 aa24.2■■□□□ 1.46
BRF1-208ENST00000546997 GTF3C3Q9Y5Q9 886 aa24.2■■□□□ 1.46
BRF1-208ENST00000546997 ADGRL1O94910 1474 aa24.2■■□□□ 1.46
BRF1-208ENST00000546997 C9orf84Q5VXU9 1444 aa24.2■■□□□ 1.46
BRF1-208ENST00000546997 ROCK1Q13464 1354 aa24.19■■□□□ 1.46
BRF1-208ENST00000546997 PPRC1Q5VV67 1664 aaKnown RBP24.18■■□□□ 1.46
BRF1-208ENST00000546997 ADGRL2O95490 1459 aa24.18■■□□□ 1.46
BRF1-208ENST00000546997 TRAPPC8Q9Y2L5 1435 aa24.18■■□□□ 1.46
BRF1-208ENST00000546997 KDM6BO15054 1643 aa24.16■■□□□ 1.46
BRF1-208ENST00000546997 NCOA1Q15788 1441 aa24.16■■□□□ 1.46
BRF1-208ENST00000546997 RSPH4AQ5TD94 716 aa24.14■■□□□ 1.46
BRF1-208ENST00000546997 MAST1Q9Y2H9 1570 aa24.14■■□□□ 1.46
BRF1-208ENST00000546997 SCAPERQ9BY12 1400 aa24.14■■□□□ 1.45
BRF1-208ENST00000546997 TSPY4P0CV99 314 aa24.13■■□□□ 1.45
BRF1-208ENST00000546997 TSPY10P0CW01 314 aa24.13■■□□□ 1.45
BRF1-208ENST00000546997 NEO1Q92859 1461 aa24.13■■□□□ 1.45
BRF1-208ENST00000546997 ANKRD30AQ9BXX3 1397 aa24.11■■□□□ 1.45
BRF1-208ENST00000546997 AFAP1Q8N556 730 aa24.09■■□□□ 1.45
BRF1-208ENST00000546997 PLXNC1O60486 1568 aa24.07■■□□□ 1.44
BRF1-208ENST00000546997 ZFYVE16Q7Z3T8 1539 aa24.07■■□□□ 1.44
BRF1-208ENST00000546997 KCNA4P22459 653 aa24.06■■□□□ 1.44
BRF1-208ENST00000546997 INO80Q9ULG1 1556 aaPredicted RBP24.06■■□□□ 1.44
BRF1-208ENST00000546997 KIF15Q9NS87 1388 aa24.05■■□□□ 1.44
BRF1-208ENST00000546997 POGZQ7Z3K3 1410 aa24.05■■□□□ 1.44
BRF1-208ENST00000546997 DHX57Q6P158 1386 aaKnown RBP24.04■■□□□ 1.44
BRF1-208ENST00000546997 ZNF518AQ6AHZ1 1483 aa24.04■■□□□ 1.44
BRF1-208ENST00000546997 TEX14Q8IWB6 1497 aa24.03■■□□□ 1.44
BRF1-208ENST00000546997 RICTORQ6R327 1708 aa24.03■■□□□ 1.44
BRF1-208ENST00000546997 KDM5CP41229 1560 aa24.02■■□□□ 1.44
BRF1-208ENST00000546997 ATP7AQ04656 1500 aa24.02■■□□□ 1.44
BRF1-208ENST00000546997 SPAG9O60271 1321 aaKnown RBP24.02■■□□□ 1.44
BRF1-208ENST00000546997 KIDINS220Q9ULH0 1771 aa24■■□□□ 1.43
BRF1-208ENST00000546997 ANKRD50Q9ULJ7 1429 aa24■■□□□ 1.43
BRF1-208ENST00000546997 RTEL1-TNFRSF6BF6WH68 1400 aa23.99■■□□□ 1.43
BRF1-208ENST00000546997 DENND4BO75064 1496 aaPredicted RBP23.99■■□□□ 1.43
BRF1-208ENST00000546997 TRHP20396 242 aaPredicted RBP23.99■■□□□ 1.43
BRF1-208ENST00000546997 FRMPD1Q5SYB0 1578 aa23.97■■□□□ 1.43
BRF1-208ENST00000546997 RAPGEF3O95398 923 aa23.96■■□□□ 1.43
BRF1-208ENST00000546997 HECW2Q9P2P5 1572 aa23.96■■□□□ 1.43
BRF1-208ENST00000546997 DUOX2Q9NRD8 1548 aa23.94■■□□□ 1.42
BRF1-208ENST00000546997 CLSPNQ9HAW4 1339 aa23.93■■□□□ 1.42
BRF1-208ENST00000546997 ZNF316A6NFI3 1004 aaPredicted RBP23.92■■□□□ 1.42
BRF1-208ENST00000546997 MLH3Q9UHC1 1453 aa23.91■■□□□ 1.42
BRF1-208ENST00000546997 ABCA6Q8N139 1617 aa23.89■■□□□ 1.42
BRF1-208ENST00000546997 MYT1LQ9UL68 1186 aa23.89■■□□□ 1.42
Retrieved 100 of 20,778 RNA–protein pairs in 9.7 ms