RNA–Protein interactions for RNA: ENST00000546983.1

NKX2-1-205, Transcript of NK2 homeobox 1, humanhuman

TSL 4

Gene NKX2-1, Length 653 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NKX2-1-205ENST00000546983 ADGRL1O94910 1474 aa39.89■■■■□ 3.98
NKX2-1-205ENST00000546983 LRRC9Q6ZRR7 1453 aa39.88■■■■□ 3.98
NKX2-1-205ENST00000546983 PREX2Q70Z35 1606 aa39.88■■■■□ 3.97
NKX2-1-205ENST00000546983 GPATCH8Q9UKJ3 1502 aaKnown RBP39.84■■■■□ 3.97
NKX2-1-205ENST00000546983 SCAPERQ9BY12 1400 aa39.83■■■■□ 3.97
NKX2-1-205ENST00000546983 SUPT6HQ7KZ85 1726 aaKnown RBP39.82■■■■□ 3.97
NKX2-1-205ENST00000546983 RAPGEF3O95398 923 aa39.81■■■■□ 3.96
NKX2-1-205ENST00000546983 CFDP1Q9UEE9 299 aaPredicted RBP39.81■■■■□ 3.96
NKX2-1-205ENST00000546983 CDC42BPBQ9Y5S2 1711 aa39.78■■■■□ 3.96
NKX2-1-205ENST00000546983 PLEKHH2Q8IVE3 1493 aa39.77■■■■□ 3.96
NKX2-1-205ENST00000546983 CDC42BPAQ5VT25 1732 aa39.77■■■■□ 3.96
NKX2-1-205ENST00000546983 NCOA2Q15596 1464 aa39.76■■■■□ 3.96
NKX2-1-205ENST00000546983 POGZQ7Z3K3 1410 aa39.75■■■■□ 3.95
NKX2-1-205ENST00000546983 MAGI2Q86UL8 1455 aa39.75■■■■□ 3.95
NKX2-1-205ENST00000546983 ZNF518AQ6AHZ1 1483 aa39.74■■■■□ 3.95
NKX2-1-205ENST00000546983 ITSN2Q9NZM3 1697 aa39.73■■■■□ 3.95
NKX2-1-205ENST00000546983 ZMYM4Q5VZL5 1548 aa39.7■■■■□ 3.95
NKX2-1-205ENST00000546983 KIAA1107Q9UPP5 1409 aa39.69■■■■□ 3.94
NKX2-1-205ENST00000546983 RICTORQ6R327 1708 aa39.68■■■■□ 3.94
NKX2-1-205ENST00000546983 FRMPD1Q5SYB0 1578 aa39.68■■■■□ 3.94
NKX2-1-205ENST00000546983 KANK4Q5T7N3 995 aaPredicted RBP39.68■■■■□ 3.94
NKX2-1-205ENST00000546983 ZNF777Q9ULD5 760 aaPredicted RBP39.67■■■■□ 3.94
NKX2-1-205ENST00000546983 ABCC1P33527 1531 aa39.65■■■■□ 3.94
NKX2-1-205ENST00000546983 RSPH4AQ5TD94 716 aa39.57■■■■□ 3.93
NKX2-1-205ENST00000546983 SAMD9LQ8IVG5 1584 aa39.56■■■■□ 3.92
NKX2-1-205ENST00000546983 KDM5CP41229 1560 aa39.55■■■■□ 3.92
NKX2-1-205ENST00000546983 MIA2Q96PC5 1412 aa39.55■■■■□ 3.92
NKX2-1-205ENST00000546983 AFAP1Q8N556 730 aa39.54■■■■□ 3.92
NKX2-1-205ENST00000546983 ZFYVE16Q7Z3T8 1539 aa39.54■■■■□ 3.92
NKX2-1-205ENST00000546983 ARHGEF40Q8TER5 1519 aa39.53■■■■□ 3.92
NKX2-1-205ENST00000546983 MYOM3Q5VTT5 1437 aa39.52■■■■□ 3.92
NKX2-1-205ENST00000546983 MLH3Q9UHC1 1453 aa39.51■■■■□ 3.92
NKX2-1-205ENST00000546983 ARHGEF12Q9NZN5 1544 aa39.5■■■■□ 3.91
NKX2-1-205ENST00000546983 SYCP2Q9BX26 1530 aa39.49■■■■□ 3.91
NKX2-1-205ENST00000546983 TRAPPC8Q9Y2L5 1435 aa39.48■■■■□ 3.91
NKX2-1-205ENST00000546983 MYT1LQ9UL68 1186 aa39.48■■■■□ 3.91
NKX2-1-205ENST00000546983 HNRNPMP52272 730 aaKnown RBP eCLIP39.46■■■■□ 3.91
NKX2-1-205ENST00000546983 HECW2Q9P2P5 1572 aa39.45■■■■□ 3.91
NKX2-1-205ENST00000546983 ATP10AO60312 1499 aa39.42■■■■□ 3.9
NKX2-1-205ENST00000546983 SPAG9O60271 1321 aaKnown RBP39.41■■■■□ 3.9
NKX2-1-205ENST00000546983 CAMSAP2Q08AD1 1489 aa39.41■■■■□ 3.9
NKX2-1-205ENST00000546983 YEATS2Q9ULM3 1422 aa39.4■■■■□ 3.9
NKX2-1-205ENST00000546983 ZNF644Q9H582 1327 aaPredicted RBP39.4■■■■□ 3.9
NKX2-1-205ENST00000546983 C9orf84Q5VXU9 1444 aa39.38■■■■□ 3.89
NKX2-1-205ENST00000546983 MBD5Q9P267 1494 aa39.37■■■■□ 3.89
NKX2-1-205ENST00000546983 ARID4BQ4LE39 1312 aaPredicted RBP39.36■■■■□ 3.89
NKX2-1-205ENST00000546983 CCDC141Q6ZP82 1450 aa39.33■■■■□ 3.89
NKX2-1-205ENST00000546983 AEBP2Q6ZN18 517 aaPredicted RBP39.33■■■■□ 3.89
NKX2-1-205ENST00000546983 RTEL1-TNFRSF6BF6WH68 1400 aa39.31■■■■□ 3.88
NKX2-1-205ENST00000546983 TSPY4P0CV99 314 aa39.31■■■■□ 3.88
NKX2-1-205ENST00000546983 TSPY10P0CW01 314 aa39.31■■■■□ 3.88
NKX2-1-205ENST00000546983 ARHGEF5Q12774 1597 aa39.3■■■■□ 3.88
NKX2-1-205ENST00000546983 REREQ9P2R6 1566 aa39.29■■■■□ 3.88
NKX2-1-205ENST00000546983 KDM4FA0A1W2PPD8 638 aa39.28■■■■□ 3.88
NKX2-1-205ENST00000546983 FGD6Q6ZV73 1430 aa39.28■■■■□ 3.88
NKX2-1-205ENST00000546983 ATP7AQ04656 1500 aa39.25■■■■□ 3.87
NKX2-1-205ENST00000546983 DIP2CQ9Y2E4 1556 aa39.24■■■■□ 3.87
NKX2-1-205ENST00000546983 KIDINS220Q9ULH0 1771 aa39.22■■■■□ 3.87
NKX2-1-205ENST00000546983 INO80Q9ULG1 1556 aaPredicted RBP39.21■■■■□ 3.87
NKX2-1-205ENST00000546983 TCOF1Q13428 1488 aaKnown RBP39.19■■■■□ 3.86
NKX2-1-205ENST00000546983 PTPN23Q9H3S7 1636 aa39.18■■■■□ 3.86
NKX2-1-205ENST00000546983 AGLP35573 1532 aa39.17■■■■□ 3.86
NKX2-1-205ENST00000546983 ABCA6Q8N139 1617 aa39.17■■■■□ 3.86
NKX2-1-205ENST00000546983 BCORL1Q5H9F3 1711 aa39.12■■■■□ 3.85
NKX2-1-205ENST00000546983 A2MP01023 1474 aa39.09■■■■□ 3.85
NKX2-1-205ENST00000546983 MAST1Q9Y2H9 1570 aa39.07■■■■□ 3.84
NKX2-1-205ENST00000546983 ADAMTSL3P82987 1691 aa39.06■■■■□ 3.84
NKX2-1-205ENST00000546983 SHANK2Q9UPX8 1470 aa39.06■■■■□ 3.84
NKX2-1-205ENST00000546983 ADGBQ8N7X0 1667 aa39.06■■■■□ 3.84
NKX2-1-205ENST00000546983 DHX29Q7Z478 1369 aaKnown RBP39.03■■■■□ 3.84
NKX2-1-205ENST00000546983 FAM50AQ14320 339 aaKnown RBP39■■■■□ 3.83
NKX2-1-205ENST00000546983 DAPK1P53355 1430 aa38.99■■■■□ 3.83
NKX2-1-205ENST00000546983 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP38.99■■■■□ 3.83
NKX2-1-205ENST00000546983 PLXNC1O60486 1568 aa38.99■■■■□ 3.83
NKX2-1-205ENST00000546983 ABCC5O15440 1437 aa38.98■■■■□ 3.83
NKX2-1-205ENST00000546983 MLECQ14165 292 aa38.98■■■■□ 3.83
NKX2-1-205ENST00000546983 ESF1Q9H501 851 aaKnown RBP38.98■■■■□ 3.83
NKX2-1-205ENST00000546983 PPP6R1Q9UPN7 881 aa38.98■■■■□ 3.83
NKX2-1-205ENST00000546983 DNMT1P26358 1616 aaKnown RBP38.98■■■■□ 3.83
NKX2-1-205ENST00000546983 SIGLEC1Q9BZZ2 1709 aa38.94■■■■□ 3.82
NKX2-1-205ENST00000546983 PPARGC1BQ86YN6 1023 aaKnown RBP38.92■■■■□ 3.82
NKX2-1-205ENST00000546983 MADDQ8WXG6 1647 aa38.91■■■■□ 3.82
NKX2-1-205ENST00000546983 PTPRMP28827 1452 aa38.91■■■■□ 3.82
NKX2-1-205ENST00000546983 ANKRD30AQ9BXX3 1397 aa38.9■■■■□ 3.82
NKX2-1-205ENST00000546983 CNTLNQ9NXG0 1405 aa38.89■■■■□ 3.82
NKX2-1-205ENST00000546983 CROCC2H7BZ55 1655 aa38.88■■■■□ 3.81
NKX2-1-205ENST00000546983 DUOX2Q9NRD8 1548 aa38.84■■■■□ 3.81
NKX2-1-205ENST00000546983 FER1L4A9Z1Z3 1794 aa38.82■■■■□ 3.8
NKX2-1-205ENST00000546983 KIF15Q9NS87 1388 aa38.82■■■■□ 3.8
NKX2-1-205ENST00000546983 RRBP1Q9P2E9 1410 aaKnown RBP38.8■■■■□ 3.8
NKX2-1-205ENST00000546983 KIF3BO15066 747 aa38.8■■■■□ 3.8
NKX2-1-205ENST00000546983 FAM135AQ9P2D6 1515 aa38.79■■■■□ 3.8
NKX2-1-205ENST00000546983 GGT6Q6P531 493 aa38.78■■■■□ 3.8
NKX2-1-205ENST00000546983 ADGRL2O95490 1459 aa38.78■■■■□ 3.8
NKX2-1-205ENST00000546983 RIMS1Q86UR5 1692 aaKnown RBP38.78■■■■□ 3.8
NKX2-1-205ENST00000546983 ERBINQ96RT1 1412 aa38.77■■■■□ 3.8
NKX2-1-205ENST00000546983 NCOA1Q15788 1441 aa38.75■■■■□ 3.79
NKX2-1-205ENST00000546983 EIF2AK4Q9P2K8 1649 aaKnown RBP38.74■■■■□ 3.79
NKX2-1-205ENST00000546983 RRP7BPQ9NSQ0 103 aa38.74■■■■□ 3.79
NKX2-1-205ENST00000546983 CHIC2Q9UKJ5 165 aa38.73■■■■□ 3.79
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms