RNA–Protein interactions for RNA: ENST00000546869.1

DDX54-203, Transcript of DEAD-box helicase 54, humanhuman

TSL 3

Gene DDX54, Length 420 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX54-203ENST00000546869 CCNB3Q8WWL7 1395 aa22.69■■□□□ 1.22
DDX54-203ENST00000546869 ARHGAP5Q13017 1502 aa22.67■■□□□ 1.22
DDX54-203ENST00000546869 PREX2Q70Z35 1606 aa22.66■■□□□ 1.22
DDX54-203ENST00000546869 NCOA2Q15596 1464 aa22.66■■□□□ 1.22
DDX54-203ENST00000546869 SUPT6HQ7KZ85 1726 aaKnown RBP22.65■■□□□ 1.22
DDX54-203ENST00000546869 CDC42BPBQ9Y5S2 1711 aa22.65■■□□□ 1.22
DDX54-203ENST00000546869 DENND4BO75064 1496 aaPredicted RBP22.64■■□□□ 1.21
DDX54-203ENST00000546869 ADGRL1O94910 1474 aa22.64■■□□□ 1.21
DDX54-203ENST00000546869 CFDP1Q9UEE9 299 aaPredicted RBP22.63■■□□□ 1.21
DDX54-203ENST00000546869 SCAPERQ9BY12 1400 aa22.63■■□□□ 1.21
DDX54-203ENST00000546869 CDC42BPAQ5VT25 1732 aa22.62■■□□□ 1.21
DDX54-203ENST00000546869 RAPGEF3O95398 923 aa22.62■■□□□ 1.21
DDX54-203ENST00000546869 KIAA1107Q9UPP5 1409 aa22.57■■□□□ 1.2
DDX54-203ENST00000546869 POGZQ7Z3K3 1410 aa22.57■■□□□ 1.2
DDX54-203ENST00000546869 PLEKHH2Q8IVE3 1493 aa22.56■■□□□ 1.2
DDX54-203ENST00000546869 ITSN2Q9NZM3 1697 aa22.55■■□□□ 1.2
DDX54-203ENST00000546869 FRMPD1Q5SYB0 1578 aa22.55■■□□□ 1.2
DDX54-203ENST00000546869 ABCC1P33527 1531 aa22.54■■□□□ 1.2
DDX54-203ENST00000546869 ZNF777Q9ULD5 760 aaPredicted RBP22.54■■□□□ 1.2
DDX54-203ENST00000546869 MIA2Q96PC5 1412 aa22.53■■□□□ 1.2
DDX54-203ENST00000546869 RICTORQ6R327 1708 aa22.53■■□□□ 1.2
DDX54-203ENST00000546869 ZNF518AQ6AHZ1 1483 aa22.53■■□□□ 1.2
DDX54-203ENST00000546869 MAGI2Q86UL8 1455 aa22.53■■□□□ 1.2
DDX54-203ENST00000546869 ARHGEF12Q9NZN5 1544 aa22.52■■□□□ 1.2
DDX54-203ENST00000546869 MYOM3Q5VTT5 1437 aa22.52■■□□□ 1.2
DDX54-203ENST00000546869 ZMYM4Q5VZL5 1548 aa22.52■■□□□ 1.19
DDX54-203ENST00000546869 SAMD9LQ8IVG5 1584 aa22.51■■□□□ 1.19
DDX54-203ENST00000546869 AFAP1Q8N556 730 aa22.5■■□□□ 1.19
DDX54-203ENST00000546869 RSPH4AQ5TD94 716 aa22.49■■□□□ 1.19
DDX54-203ENST00000546869 ZNF644Q9H582 1327 aaPredicted RBP22.48■■□□□ 1.19
DDX54-203ENST00000546869 TRAPPC8Q9Y2L5 1435 aa22.48■■□□□ 1.19
DDX54-203ENST00000546869 KDM5CP41229 1560 aa22.47■■□□□ 1.19
DDX54-203ENST00000546869 HNRNPMP52272 730 aaKnown RBP eCLIP22.47■■□□□ 1.19
DDX54-203ENST00000546869 MBD5Q9P267 1494 aa22.46■■□□□ 1.19
DDX54-203ENST00000546869 MLH3Q9UHC1 1453 aa22.45■■□□□ 1.18
DDX54-203ENST00000546869 SYCP2Q9BX26 1530 aa22.44■■□□□ 1.18
DDX54-203ENST00000546869 CAMSAP2Q08AD1 1489 aa22.42■■□□□ 1.18
DDX54-203ENST00000546869 ZFYVE16Q7Z3T8 1539 aa22.4■■□□□ 1.18
DDX54-203ENST00000546869 FGD6Q6ZV73 1430 aa22.39■■□□□ 1.17
DDX54-203ENST00000546869 YEATS2Q9ULM3 1422 aa22.39■■□□□ 1.17
DDX54-203ENST00000546869 ARHGEF40Q8TER5 1519 aa22.38■■□□□ 1.17
DDX54-203ENST00000546869 SPAG9O60271 1321 aaKnown RBP22.37■■□□□ 1.17
DDX54-203ENST00000546869 ATP10AO60312 1499 aa22.37■■□□□ 1.17
DDX54-203ENST00000546869 HECW2Q9P2P5 1572 aa22.37■■□□□ 1.17
DDX54-203ENST00000546869 TCOF1Q13428 1488 aaKnown RBP22.36■■□□□ 1.17
DDX54-203ENST00000546869 RTEL1-TNFRSF6BF6WH68 1400 aa22.36■■□□□ 1.17
DDX54-203ENST00000546869 ARHGEF5Q12774 1597 aa22.36■■□□□ 1.17
DDX54-203ENST00000546869 CCDC141Q6ZP82 1450 aa22.35■■□□□ 1.17
DDX54-203ENST00000546869 TSPY4P0CV99 314 aa22.32■■□□□ 1.16
DDX54-203ENST00000546869 TSPY10P0CW01 314 aa22.32■■□□□ 1.16
DDX54-203ENST00000546869 MYT1LQ9UL68 1186 aa22.32■■□□□ 1.16
DDX54-203ENST00000546869 C9orf84Q5VXU9 1444 aa22.31■■□□□ 1.16
DDX54-203ENST00000546869 PTPN23Q9H3S7 1636 aa22.31■■□□□ 1.16
DDX54-203ENST00000546869 KIDINS220Q9ULH0 1771 aa22.3■■□□□ 1.16
DDX54-203ENST00000546869 REREQ9P2R6 1566 aa22.29■■□□□ 1.16
DDX54-203ENST00000546869 PPARGC1BQ86YN6 1023 aaKnown RBP22.29■■□□□ 1.16
DDX54-203ENST00000546869 ATP7AQ04656 1500 aa22.29■■□□□ 1.16
DDX54-203ENST00000546869 INO80Q9ULG1 1556 aaPredicted RBP22.29■■□□□ 1.16
DDX54-203ENST00000546869 DIP2CQ9Y2E4 1556 aa22.29■■□□□ 1.16
DDX54-203ENST00000546869 KDM4FA0A1W2PPD8 638 aa22.27■■□□□ 1.16
DDX54-203ENST00000546869 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP22.26■■□□□ 1.15
DDX54-203ENST00000546869 ABCA6Q8N139 1617 aa22.25■■□□□ 1.15
DDX54-203ENST00000546869 ARID4BQ4LE39 1312 aaPredicted RBP22.25■■□□□ 1.15
DDX54-203ENST00000546869 ABCC5O15440 1437 aa22.24■■□□□ 1.15
DDX54-203ENST00000546869 MAST1Q9Y2H9 1570 aa22.24■■□□□ 1.15
DDX54-203ENST00000546869 AGLP35573 1532 aa22.23■■□□□ 1.15
DDX54-203ENST00000546869 SHANK2Q9UPX8 1470 aa22.22■■□□□ 1.15
DDX54-203ENST00000546869 DAPK1P53355 1430 aa22.22■■□□□ 1.15
DDX54-203ENST00000546869 FAM50AQ14320 339 aaKnown RBP22.2■■□□□ 1.14
DDX54-203ENST00000546869 DHX29Q7Z478 1369 aaKnown RBP22.2■■□□□ 1.14
DDX54-203ENST00000546869 A2MP01023 1474 aa22.2■■□□□ 1.14
DDX54-203ENST00000546869 DNMT1P26358 1616 aaKnown RBP22.2■■□□□ 1.14
DDX54-203ENST00000546869 RRBP1Q9P2E9 1410 aaKnown RBP22.19■■□□□ 1.14
DDX54-203ENST00000546869 SIGLEC1Q9BZZ2 1709 aa22.17■■□□□ 1.14
DDX54-203ENST00000546869 BCORL1Q5H9F3 1711 aa22.17■■□□□ 1.14
DDX54-203ENST00000546869 PLXNC1O60486 1568 aa22.16■■□□□ 1.14
DDX54-203ENST00000546869 ADGBQ8N7X0 1667 aa22.16■■□□□ 1.14
DDX54-203ENST00000546869 ADAMTSL3P82987 1691 aa22.15■■□□□ 1.14
DDX54-203ENST00000546869 CROCC2H7BZ55 1655 aa22.12■■□□□ 1.13
DDX54-203ENST00000546869 PPP6R1Q9UPN7 881 aa22.12■■□□□ 1.13
DDX54-203ENST00000546869 NCOA1Q15788 1441 aa22.11■■□□□ 1.13
DDX54-203ENST00000546869 ANKRD30AQ9BXX3 1397 aa22.11■■□□□ 1.13
DDX54-203ENST00000546869 ADGRL2O95490 1459 aa22.1■■□□□ 1.13
DDX54-203ENST00000546869 MLECQ14165 292 aa22.09■■□□□ 1.13
DDX54-203ENST00000546869 DUOX2Q9NRD8 1548 aa22.08■■□□□ 1.13
DDX54-203ENST00000546869 PTPRKQ15262 1439 aa22.07■■□□□ 1.12
DDX54-203ENST00000546869 CHIC2Q9UKJ5 165 aa22.07■■□□□ 1.12
DDX54-203ENST00000546869 KIF15Q9NS87 1388 aa22.07■■□□□ 1.12
DDX54-203ENST00000546869 AEBP2Q6ZN18 517 aaPredicted RBP22.06■■□□□ 1.12
DDX54-203ENST00000546869 RRP7BPQ9NSQ0 103 aa22.06■■□□□ 1.12
DDX54-203ENST00000546869 ROCK1Q13464 1354 aa22.06■■□□□ 1.12
DDX54-203ENST00000546869 KIF3BO15066 747 aa22.04■■□□□ 1.12
DDX54-203ENST00000546869 ERBINQ96RT1 1412 aa22.04■■□□□ 1.12
DDX54-203ENST00000546869 PTPRMP28827 1452 aa22.03■■□□□ 1.12
DDX54-203ENST00000546869 MADDQ8WXG6 1647 aa22.03■■□□□ 1.12
DDX54-203ENST00000546869 GGT6Q6P531 493 aa22.02■■□□□ 1.12
DDX54-203ENST00000546869 CNTLNQ9NXG0 1405 aa22.02■■□□□ 1.12
DDX54-203ENST00000546869 EIF2AK4Q9P2K8 1649 aaKnown RBP22■■□□□ 1.11
DDX54-203ENST00000546869 ESF1Q9H501 851 aaKnown RBP22■■□□□ 1.11
DDX54-203ENST00000546869 FAM135AQ9P2D6 1515 aa21.98■■□□□ 1.11
Retrieved 100 of 20,778 RNA–protein pairs in 10.3 ms