RNA–Protein interactions for RNA: ENST00000546656.1

KRT18-203, Transcript of keratin 18, humanhuman

TSL 2

Gene KRT18, Length 521 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KRT18-203ENST00000546656 YEATS2Q9ULM3 1422 aa22.76■■□□□ 1.23
KRT18-203ENST00000546656 CCDC18Q5T9S5 1454 aa22.75■■□□□ 1.23
KRT18-203ENST00000546656 BCORL1Q5H9F3 1711 aa22.75■■□□□ 1.23
KRT18-203ENST00000546656 EFCAB2Q5VUJ9 269 aa22.75■■□□□ 1.23
KRT18-203ENST00000546656 ZFYVE16Q7Z3T8 1539 aa22.75■■□□□ 1.23
KRT18-203ENST00000546656 PTPRMP28827 1452 aa22.73■■□□□ 1.23
KRT18-203ENST00000546656 ARHGAP5Q13017 1502 aa22.73■■□□□ 1.23
KRT18-203ENST00000546656 MADDQ8WXG6 1647 aa22.72■■□□□ 1.23
KRT18-203ENST00000546656 FYCO1Q9BQS8 1478 aa22.72■■□□□ 1.23
KRT18-203ENST00000546656 MAGI2Q86UL8 1455 aa22.7■■□□□ 1.22
KRT18-203ENST00000546656 SIGLEC1Q9BZZ2 1709 aa22.7■■□□□ 1.22
KRT18-203ENST00000546656 CDC42BPBQ9Y5S2 1711 aa22.65■■□□□ 1.22
KRT18-203ENST00000546656 PREX2Q70Z35 1606 aa22.64■■□□□ 1.22
KRT18-203ENST00000546656 AFAP1Q8N556 730 aa22.64■■□□□ 1.21
KRT18-203ENST00000546656 RIMS1Q86UR5 1692 aaKnown RBP22.64■■□□□ 1.21
KRT18-203ENST00000546656 ZNF518AQ6AHZ1 1483 aa22.63■■□□□ 1.21
KRT18-203ENST00000546656 MLECQ14165 292 aa22.62■■□□□ 1.21
KRT18-203ENST00000546656 ATP10AO60312 1499 aa22.6■■□□□ 1.21
KRT18-203ENST00000546656 KDM5CP41229 1560 aa22.6■■□□□ 1.21
KRT18-203ENST00000546656 PLPPR3Q6T4P5 718 aa22.59■■□□□ 1.21
KRT18-203ENST00000546656 C9orf84Q5VXU9 1444 aa22.58■■□□□ 1.21
KRT18-203ENST00000546656 ABCC1P33527 1531 aa22.58■■□□□ 1.21
KRT18-203ENST00000546656 ARHGEF12Q9NZN5 1544 aa22.58■■□□□ 1.21
KRT18-203ENST00000546656 MYT1LQ9UL68 1186 aa22.58■■□□□ 1.21
KRT18-203ENST00000546656 CDC42BPAQ5VT25 1732 aa22.57■■□□□ 1.2
KRT18-203ENST00000546656 CEP162Q5TB80 1403 aa22.57■■□□□ 1.2
KRT18-203ENST00000546656 TRAPPC8Q9Y2L5 1435 aa22.56■■□□□ 1.2
KRT18-203ENST00000546656 ITSN2Q9NZM3 1697 aa22.54■■□□□ 1.2
KRT18-203ENST00000546656 ZNF777Q9ULD5 760 aaPredicted RBP22.53■■□□□ 1.2
KRT18-203ENST00000546656 DIP2CQ9Y2E4 1556 aa22.53■■□□□ 1.2
KRT18-203ENST00000546656 GPATCH8Q9UKJ3 1502 aaKnown RBP22.52■■□□□ 1.2
KRT18-203ENST00000546656 FER1L4A9Z1Z3 1794 aa22.52■■□□□ 1.2
KRT18-203ENST00000546656 ABCA6Q8N139 1617 aa22.51■■□□□ 1.19
KRT18-203ENST00000546656 LMTK3Q96Q04 1460 aa22.5■■□□□ 1.19
KRT18-203ENST00000546656 MLH3Q9UHC1 1453 aa22.5■■□□□ 1.19
KRT18-203ENST00000546656 SAMD9LQ8IVG5 1584 aa22.5■■□□□ 1.19
KRT18-203ENST00000546656 MTUS2Q5JR59 1369 aa22.5■■□□□ 1.19
KRT18-203ENST00000546656 CCNB3Q8WWL7 1395 aa22.47■■□□□ 1.19
KRT18-203ENST00000546656 SYCP2Q9BX26 1530 aa22.47■■□□□ 1.19
KRT18-203ENST00000546656 LOC105371045A0A1W2PR82 267 aa22.46■■□□□ 1.19
KRT18-203ENST00000546656 ILDR1Q86SU0 546 aaPredicted RBP22.44■■□□□ 1.18
KRT18-203ENST00000546656 REREQ9P2R6 1566 aa22.44■■□□□ 1.18
KRT18-203ENST00000546656 CFDP1Q9UEE9 299 aaPredicted RBP22.44■■□□□ 1.18
KRT18-203ENST00000546656 KIDINS220Q9ULH0 1771 aa22.43■■□□□ 1.18
KRT18-203ENST00000546656 HNRNPMP52272 730 aaKnown RBP eCLIP22.43■■□□□ 1.18
KRT18-203ENST00000546656 EHBP1L1Q8N3D4 1523 aa22.42■■□□□ 1.18
KRT18-203ENST00000546656 CEBPAP49715 358 aaPredicted RBP22.41■■□□□ 1.18
KRT18-203ENST00000546656 HSPA2P54652 639 aa22.41■■□□□ 1.18
KRT18-203ENST00000546656 TIAM1Q13009 1591 aa22.4■■□□□ 1.18
KRT18-203ENST00000546656 AGLP35573 1532 aa22.37■■□□□ 1.17
KRT18-203ENST00000546656 SPAG9O60271 1321 aaKnown RBP22.37■■□□□ 1.17
KRT18-203ENST00000546656 PLEKHH2Q8IVE3 1493 aa22.37■■□□□ 1.17
KRT18-203ENST00000546656 KIAA1107Q9UPP5 1409 aa22.37■■□□□ 1.17
KRT18-203ENST00000546656 ZNF644Q9H582 1327 aaPredicted RBP22.36■■□□□ 1.17
KRT18-203ENST00000546656 ATP7AQ04656 1500 aa22.34■■□□□ 1.17
KRT18-203ENST00000546656 INO80Q9ULG1 1556 aaPredicted RBP22.33■■□□□ 1.16
KRT18-203ENST00000546656 VPS8Q8N3P4 1428 aa22.31■■□□□ 1.16
KRT18-203ENST00000546656 NCOA2Q15596 1464 aa22.3■■□□□ 1.16
KRT18-203ENST00000546656 PREX1Q8TCU6 1659 aa22.3■■□□□ 1.16
KRT18-203ENST00000546656 ESF1Q9H501 851 aaKnown RBP22.29■■□□□ 1.16
KRT18-203ENST00000546656 SUPT6HQ7KZ85 1726 aaKnown RBP22.28■■□□□ 1.16
KRT18-203ENST00000546656 C3P01024 1663 aa22.28■■□□□ 1.16
KRT18-203ENST00000546656 MBD5Q9P267 1494 aa22.28■■□□□ 1.16
KRT18-203ENST00000546656 A2MP01023 1474 aa22.26■■□□□ 1.15
KRT18-203ENST00000546656 PLXNC1O60486 1568 aa22.25■■□□□ 1.15
KRT18-203ENST00000546656 UHRF1BP1Q6BDS2 1440 aa22.23■■□□□ 1.15
KRT18-203ENST00000546656 CNTLNQ9NXG0 1405 aa22.23■■□□□ 1.15
KRT18-203ENST00000546656 CAMSAP2Q08AD1 1489 aa22.22■■□□□ 1.15
KRT18-203ENST00000546656 LRRC9Q6ZRR7 1453 aa22.22■■□□□ 1.15
KRT18-203ENST00000546656 ADGBQ8N7X0 1667 aa22.19■■□□□ 1.14
KRT18-203ENST00000546656 KANK4Q5T7N3 995 aaPredicted RBP22.18■■□□□ 1.14
KRT18-203ENST00000546656 GGT6Q6P531 493 aa22.18■■□□□ 1.14
KRT18-203ENST00000546656 CCDC141Q6ZP82 1450 aa22.17■■□□□ 1.14
KRT18-203ENST00000546656 RTEL1-TNFRSF6BF6WH68 1400 aa22.17■■□□□ 1.14
KRT18-203ENST00000546656 ZMYM3Q14202 1370 aa22.16■■□□□ 1.14
KRT18-203ENST00000546656 MROH2AA6NES4 1674 aa22.16■■□□□ 1.14
KRT18-203ENST00000546656 CLTCQ00610 1675 aaKnown RBP22.16■■□□□ 1.14
KRT18-203ENST00000546656 FBXO41Q8TF61 875 aa22.14■■□□□ 1.13
KRT18-203ENST00000546656 MAP3K1Q13233 1512 aa22.13■■□□□ 1.13
KRT18-203ENST00000546656 STRCQ7RTU9 1775 aa22.12■■□□□ 1.13
KRT18-203ENST00000546656 SETD1BQ9UPS6 1966 aaKnown RBP22.12■■□□□ 1.13
KRT18-203ENST00000546656 DHX29Q7Z478 1369 aaKnown RBP22.12■■□□□ 1.13
KRT18-203ENST00000546656 ARHGEF5Q12774 1597 aa22.1■■□□□ 1.13
KRT18-203ENST00000546656 NPATQ14207 1427 aa22.1■■□□□ 1.13
KRT18-203ENST00000546656 RSPH4AQ5TD94 716 aa22.1■■□□□ 1.13
KRT18-203ENST00000546656 MYOM3Q5VTT5 1437 aa22.06■■□□□ 1.12
KRT18-203ENST00000546656 KIF3BO15066 747 aa22.06■■□□□ 1.12
KRT18-203ENST00000546656 PTPRKQ15262 1439 aa22.06■■□□□ 1.12
KRT18-203ENST00000546656 TSPY4P0CV99 314 aa22.05■■□□□ 1.12
KRT18-203ENST00000546656 TSPY10P0CW01 314 aa22.05■■□□□ 1.12
KRT18-203ENST00000546656 PPP6R1Q9UPN7 881 aa22.04■■□□□ 1.12
KRT18-203ENST00000546656 DMRT2Q9Y5R5 561 aa22.04■■□□□ 1.12
KRT18-203ENST00000546656 CERKQ8TCT0 537 aa22.03■■□□□ 1.12
KRT18-203ENST00000546656 MYO3AQ8NEV4 1616 aa22.02■■□□□ 1.12
KRT18-203ENST00000546656 APLP2Q06481 763 aa22.02■■□□□ 1.12
KRT18-203ENST00000546656 NCOA1Q15788 1441 aa22.02■■□□□ 1.12
KRT18-203ENST00000546656 MIA2Q96PC5 1412 aa22.02■■□□□ 1.12
KRT18-203ENST00000546656 CAMSAP1Q5T5Y3 1602 aa22.01■■□□□ 1.11
KRT18-203ENST00000546656 KDM5DQ9BY66 1539 aa21.99■■□□□ 1.11
KRT18-203ENST00000546656 MAST1Q9Y2H9 1570 aa21.99■■□□□ 1.11
Retrieved 100 of 20,778 RNA–protein pairs in 13.9 ms