RNA–Protein interactions for RNA: ENST00000546618.2

SVOP-201, Transcript of SV2 related protein, humanhuman

TSL 4

Gene SVOP, Length 639 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SVOP-201ENST00000546618 KDM4FA0A1W2PPD8 638 aa25.66■■□□□ 1.7
SVOP-201ENST00000546618 ARAP3Q8WWN8 1544 aa25.66■■□□□ 1.7
SVOP-201ENST00000546618 RRBP1Q9P2E9 1410 aaKnown RBP25.64■■□□□ 1.7
SVOP-201ENST00000546618 ITSN2Q9NZM3 1697 aa25.64■■□□□ 1.69
SVOP-201ENST00000546618 TEX14Q8IWB6 1497 aa25.63■■□□□ 1.69
SVOP-201ENST00000546618 MAP3K4Q9Y6R4 1608 aa25.63■■□□□ 1.69
SVOP-201ENST00000546618 CDC42BPAQ5VT25 1732 aa25.62■■□□□ 1.69
SVOP-201ENST00000546618 MYO5CQ9NQX4 1742 aa25.62■■□□□ 1.69
SVOP-201ENST00000546618 PREX2Q70Z35 1606 aa25.62■■□□□ 1.69
SVOP-201ENST00000546618 ARHGAP5Q13017 1502 aa25.62■■□□□ 1.69
SVOP-201ENST00000546618 ZNF777Q9ULD5 760 aaPredicted RBP25.61■■□□□ 1.69
SVOP-201ENST00000546618 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP25.6■■□□□ 1.69
SVOP-201ENST00000546618 TRIM26Q12899 539 aaPredicted RBP25.6■■□□□ 1.69
SVOP-201ENST00000546618 FAM50AQ14320 339 aaKnown RBP25.58■■□□□ 1.69
SVOP-201ENST00000546618 FANCAO15360 1455 aa25.58■■□□□ 1.69
SVOP-201ENST00000546618 TCOF1Q13428 1488 aaKnown RBP25.57■■□□□ 1.68
SVOP-201ENST00000546618 ZNF644Q9H582 1327 aaPredicted RBP25.57■■□□□ 1.68
SVOP-201ENST00000546618 CDC42BPBQ9Y5S2 1711 aa25.57■■□□□ 1.68
SVOP-201ENST00000546618 COL17A1Q9UMD9 1497 aaPredicted RBP25.55■■□□□ 1.68
SVOP-201ENST00000546618 PTPN23Q9H3S7 1636 aa25.54■■□□□ 1.68
SVOP-201ENST00000546618 PLEKHH2Q8IVE3 1493 aa25.53■■□□□ 1.68
SVOP-201ENST00000546618 NEO1Q92859 1461 aa25.53■■□□□ 1.68
SVOP-201ENST00000546618 KIAA1107Q9UPP5 1409 aa25.52■■□□□ 1.68
SVOP-201ENST00000546618 RSPH4AQ5TD94 716 aa25.51■■□□□ 1.67
SVOP-201ENST00000546618 AKNAQ7Z591 1439 aa25.51■■□□□ 1.67
SVOP-201ENST00000546618 CAMSAP2Q08AD1 1489 aa25.51■■□□□ 1.67
SVOP-201ENST00000546618 CFAP74Q9C0B2 1584 aa25.48■■□□□ 1.67
SVOP-201ENST00000546618 SAMD9LQ8IVG5 1584 aa25.48■■□□□ 1.67
SVOP-201ENST00000546618 HNRNPMP52272 730 aaKnown RBP eCLIP25.47■■□□□ 1.67
SVOP-201ENST00000546618 ADGRL1O94910 1474 aa25.45■■□□□ 1.66
SVOP-201ENST00000546618 SCAPERQ9BY12 1400 aa25.44■■□□□ 1.66
SVOP-201ENST00000546618 MBD5Q9P267 1494 aa25.43■■□□□ 1.66
SVOP-201ENST00000546618 ABCC1P33527 1531 aa25.42■■□□□ 1.66
SVOP-201ENST00000546618 ARHGEF12Q9NZN5 1544 aa25.4■■□□□ 1.66
SVOP-201ENST00000546618 TSPY4P0CV99 314 aa25.39■■□□□ 1.66
SVOP-201ENST00000546618 TSPY10P0CW01 314 aa25.39■■□□□ 1.66
SVOP-201ENST00000546618 ITGAEP38570 1179 aa25.39■■□□□ 1.66
SVOP-201ENST00000546618 ABCC5O15440 1437 aa25.38■■□□□ 1.65
SVOP-201ENST00000546618 SYCP2Q9BX26 1530 aa25.38■■□□□ 1.65
SVOP-201ENST00000546618 ARHGEF5Q12774 1597 aa25.38■■□□□ 1.65
SVOP-201ENST00000546618 DAPK1P53355 1430 aa25.37■■□□□ 1.65
SVOP-201ENST00000546618 CCDC141Q6ZP82 1450 aa25.36■■□□□ 1.65
SVOP-201ENST00000546618 DENND4BO75064 1496 aaPredicted RBP25.35■■□□□ 1.65
SVOP-201ENST00000546618 TRAPPC8Q9Y2L5 1435 aa25.35■■□□□ 1.65
SVOP-201ENST00000546618 DNMT1P26358 1616 aaKnown RBP25.34■■□□□ 1.65
SVOP-201ENST00000546618 AFAP1Q8N556 730 aa25.34■■□□□ 1.65
SVOP-201ENST00000546618 PCGF6Q9BYE7 350 aa25.32■■□□□ 1.64
SVOP-201ENST00000546618 ZNF518AQ6AHZ1 1483 aa25.32■■□□□ 1.64
SVOP-201ENST00000546618 PTPRKQ15262 1439 aa25.31■■□□□ 1.64
SVOP-201ENST00000546618 POGZQ7Z3K3 1410 aa25.31■■□□□ 1.64
SVOP-201ENST00000546618 RAPGEF3O95398 923 aa25.3■■□□□ 1.64
SVOP-201ENST00000546618 SHANK2Q9UPX8 1470 aa25.29■■□□□ 1.64
SVOP-201ENST00000546618 SPAG9O60271 1321 aaKnown RBP25.29■■□□□ 1.64
SVOP-201ENST00000546618 CHIC2Q9UKJ5 165 aa25.28■■□□□ 1.64
SVOP-201ENST00000546618 C9orf84Q5VXU9 1444 aa25.27■■□□□ 1.64
SVOP-201ENST00000546618 ROCK1Q13464 1354 aa25.26■■□□□ 1.63
SVOP-201ENST00000546618 RTEL1-TNFRSF6BF6WH68 1400 aa25.26■■□□□ 1.63
SVOP-201ENST00000546618 ANKRD30AQ9BXX3 1397 aa25.24■■□□□ 1.63
SVOP-201ENST00000546618 MAST1Q9Y2H9 1570 aa25.22■■□□□ 1.63
SVOP-201ENST00000546618 KDM5CP41229 1560 aa25.22■■□□□ 1.63
SVOP-201ENST00000546618 ADGRL2O95490 1459 aa25.21■■□□□ 1.63
SVOP-201ENST00000546618 MLH3Q9UHC1 1453 aa25.21■■□□□ 1.63
SVOP-201ENST00000546618 NCOA1Q15788 1441 aa25.21■■□□□ 1.63
SVOP-201ENST00000546618 MYT1LQ9UL68 1186 aa25.21■■□□□ 1.63
SVOP-201ENST00000546618 CROCC2H7BZ55 1655 aa25.2■■□□□ 1.63
SVOP-201ENST00000546618 RICTORQ6R327 1708 aa25.18■■□□□ 1.62
SVOP-201ENST00000546618 RRP7BPQ9NSQ0 103 aa25.18■■□□□ 1.62
SVOP-201ENST00000546618 MAGI2Q86UL8 1455 aa25.17■■□□□ 1.62
SVOP-201ENST00000546618 ZMYM4Q5VZL5 1548 aa25.16■■□□□ 1.62
SVOP-201ENST00000546618 FRMPD1Q5SYB0 1578 aa25.15■■□□□ 1.62
SVOP-201ENST00000546618 HFM1A2PYH4 1435 aa25.15■■□□□ 1.62
SVOP-201ENST00000546618 ATP7AQ04656 1500 aa25.15■■□□□ 1.62
SVOP-201ENST00000546618 ZFYVE16Q7Z3T8 1539 aa25.14■■□□□ 1.62
SVOP-201ENST00000546618 INO80Q9ULG1 1556 aaPredicted RBP25.14■■□□□ 1.61
SVOP-201ENST00000546618 KIF15Q9NS87 1388 aa25.13■■□□□ 1.61
SVOP-201ENST00000546618 HECW2Q9P2P5 1572 aa25.13■■□□□ 1.61
SVOP-201ENST00000546618 NAIPQ13075 1403 aa25.12■■□□□ 1.61
SVOP-201ENST00000546618 ADGBQ8N7X0 1667 aa25.11■■□□□ 1.61
SVOP-201ENST00000546618 SETD5Q9C0A6 1442 aa25.1■■□□□ 1.61
SVOP-201ENST00000546618 PLXNC1O60486 1568 aa25.1■■□□□ 1.61
SVOP-201ENST00000546618 KIDINS220Q9ULH0 1771 aa25.08■■□□□ 1.61
SVOP-201ENST00000546618 HRCP23327 699 aa25.08■■□□□ 1.61
SVOP-201ENST00000546618 DUOX2Q9NRD8 1548 aa25.06■■□□□ 1.6
SVOP-201ENST00000546618 DHX29Q7Z478 1369 aaKnown RBP25.05■■□□□ 1.6
SVOP-201ENST00000546618 YEATS2Q9ULM3 1422 aa25.05■■□□□ 1.6
SVOP-201ENST00000546618 ACIN1Q9UKV3 1341 aaKnown RBP25.05■■□□□ 1.6
SVOP-201ENST00000546618 ANKRD50Q9ULJ7 1429 aa25.04■■□□□ 1.6
SVOP-201ENST00000546618 ATP10AO60312 1499 aa25.02■■□□□ 1.6
SVOP-201ENST00000546618 A2MP01023 1474 aa25.02■■□□□ 1.6
SVOP-201ENST00000546618 RAB3GAP2Q9H2M9 1393 aa25.01■■□□□ 1.59
SVOP-201ENST00000546618 ERBINQ96RT1 1412 aa25.01■■□□□ 1.59
SVOP-201ENST00000546618 DIP2CQ9Y2E4 1556 aa25■■□□□ 1.59
SVOP-201ENST00000546618 ABCA6Q8N139 1617 aa24.99■■□□□ 1.59
SVOP-201ENST00000546618 GCC2Q8IWJ2 1684 aa24.98■■□□□ 1.59
SVOP-201ENST00000546618 ILDR1Q86SU0 546 aaPredicted RBP24.96■■□□□ 1.59
SVOP-201ENST00000546618 ARHGEF40Q8TER5 1519 aa24.96■■□□□ 1.59
SVOP-201ENST00000546618 ADAMTSL3P82987 1691 aa24.94■■□□□ 1.58
SVOP-201ENST00000546618 REREQ9P2R6 1566 aa24.93■■□□□ 1.58
SVOP-201ENST00000546618 KIF3BO15066 747 aa24.93■■□□□ 1.58
SVOP-201ENST00000546618 PTPRMP28827 1452 aa24.93■■□□□ 1.58
Retrieved 100 of 20,778 RNA–protein pairs in 12.9 ms