RNA–Protein interactions for RNA: ENST00000546260.5

SOD2-216, Transcript of superoxide dismutase 2, humanhuman

TSL 5

Gene SOD2, Length 4,302 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOD2-216ENST00000546260 GOLGA6L2Q8N9W4 650 aaPredicted RBP13.33□□□□□ -0.28
SOD2-216ENST00000546260 BCL11BQ9C0K0 894 aaPredicted RBP13.32□□□□□ -0.28
SOD2-216ENST00000546260 ESPNB1AK53 854 aa13.32□□□□□ -0.28
SOD2-216ENST00000546260 KIAA1211Q6ZU35 1233 aa13.32□□□□□ -0.28
SOD2-216ENST00000546260 CHIC2Q9UKJ5 165 aa13.32□□□□□ -0.28
SOD2-216ENST00000546260 AAMPQ13685 434 aa13.32□□□□□ -0.28
SOD2-216ENST00000546260 CRBNQ96SW2 442 aa13.31□□□□□ -0.28
SOD2-216ENST00000546260 FGD1P98174 961 aa13.31□□□□□ -0.28
SOD2-216ENST00000546260 PDIA4P13667 645 aaKnown RBP13.3□□□□□ -0.28
SOD2-216ENST00000546260 CLCN1P35523 988 aa13.3□□□□□ -0.28
SOD2-216ENST00000546260 R3HCC1Q9Y3T6 440 aaKnown RBP13.29□□□□□ -0.28
SOD2-216ENST00000546260 PANK2Q9BZ23 570 aa13.28□□□□□ -0.28
SOD2-216ENST00000546260 PTMAP06454 111 aaKnown RBP13.28□□□□□ -0.28
SOD2-216ENST00000546260 CECR2Q9BXF3 1484 aa13.28□□□□□ -0.28
SOD2-216ENST00000546260 MRE11P49959 708 aa13.26□□□□□ -0.29
SOD2-216ENST00000546260 MAPK8IP2Q13387 824 aaPredicted RBP13.25□□□□□ -0.29
SOD2-216ENST00000546260 RRP7BPQ9NSQ0 103 aa13.25□□□□□ -0.29
SOD2-216ENST00000546260 SMG6Q86US8 1419 aaKnown RBP13.24□□□□□ -0.29
SOD2-216ENST00000546260 XRCC6P12956 609 aaKnown RBP eCLIP13.24□□□□□ -0.29
SOD2-216ENST00000546260 MAP7D2Q96T17 732 aa13.23□□□□□ -0.29
SOD2-216ENST00000546260 GOLGA6L22H0YM25 854 aa13.23□□□□□ -0.29
SOD2-216ENST00000546260 CALD1Q05682 793 aaKnown RBP13.22□□□□□ -0.29
SOD2-216ENST00000546260 PDZRN4Q6ZMN7 1036 aaPredicted RBP13.22□□□□□ -0.29
SOD2-216ENST00000546260 TRAK2O60296 914 aa13.21□□□□□ -0.29
SOD2-216ENST00000546260 CENPQQ7L2Z9 268 aaPredicted RBP13.21□□□□□ -0.3
SOD2-216ENST00000546260 CNTLNQ9NXG0 1405 aa13.2□□□□□ -0.3
SOD2-216ENST00000546260 CHMP4BQ9H444 224 aaKnown RBP13.2□□□□□ -0.3
SOD2-216ENST00000546260 GRPEL1Q9HAV7 217 aa13.2□□□□□ -0.3
SOD2-216ENST00000546260 HSCBQ8IWL3 235 aa13.19□□□□□ -0.3
SOD2-216ENST00000546260 RAPGEF2Q9Y4G8 1499 aa13.17□□□□□ -0.3
SOD2-216ENST00000546260 HSP90AB1P08238 724 aaKnown RBP13.17□□□□□ -0.3
SOD2-216ENST00000546260 KTN1Q86UP2 1357 aaKnown RBP13.17□□□□□ -0.3
SOD2-216ENST00000546260 MROH2BQ7Z745 1585 aa13.17□□□□□ -0.3
SOD2-216ENST00000546260 FOXD1Q16676 465 aa13.17□□□□□ -0.3
SOD2-216ENST00000546260 NAP1L2Q9ULW6 460 aaPredicted RBP13.17□□□□□ -0.3
SOD2-216ENST00000546260 PLCD3Q8N3E9 789 aa13.16□□□□□ -0.3
SOD2-216ENST00000546260 AEBP2Q6ZN18 517 aaPredicted RBP13.16□□□□□ -0.3
SOD2-216ENST00000546260 UQCRHLA0A096LP55 91 aa13.15□□□□□ -0.3
SOD2-216ENST00000546260 UQCRHP07919 91 aa13.15□□□□□ -0.3
SOD2-216ENST00000546260 WDR43Q15061 677 aaKnown RBP eCLIP13.15□□□□□ -0.3
SOD2-216ENST00000546260 CDCA7LQ96GN5 454 aa13.15□□□□□ -0.3
SOD2-216ENST00000546260 FOXD4L1Q9NU39 408 aa13.15□□□□□ -0.3
SOD2-216ENST00000546260 DDX11L8A8MPP1 907 aa13.15□□□□□ -0.31
SOD2-216ENST00000546260 L3MBTL2Q969R5 705 aa13.15□□□□□ -0.31
SOD2-216ENST00000546260 GBP4Q96PP9 640 aa13.14□□□□□ -0.31
SOD2-216ENST00000546260 CCDC7Q96M83 1385 aa13.14□□□□□ -0.31
SOD2-216ENST00000546260 ZNF771Q7L3S4 317 aaPredicted RBP13.14□□□□□ -0.31
SOD2-216ENST00000546260 MCM4P33991 863 aa13.13□□□□□ -0.31
SOD2-216ENST00000546260 MFAP1P55081 439 aaKnown RBP13.12□□□□□ -0.31
SOD2-216ENST00000546260 PAXIP1Q6ZW49 1069 aaPredicted RBP13.12□□□□□ -0.31
SOD2-216ENST00000546260 KDM2AQ9Y2K7 1162 aa13.12□□□□□ -0.31
SOD2-216ENST00000546260 RRBP1Q9P2E9 1410 aaKnown RBP13.12□□□□□ -0.31
SOD2-216ENST00000546260 MTERF4Q7Z6M4 381 aaKnown RBP13.12□□□□□ -0.31
SOD2-216ENST00000546260 CHMP5Q9NZZ3 219 aa13.12□□□□□ -0.31
SOD2-216ENST00000546260 KIF21BO75037 1637 aa13.11□□□□□ -0.31
SOD2-216ENST00000546260 PDE3BQ13370 1112 aa13.1□□□□□ -0.31
SOD2-216ENST00000546260 KIF7Q2M1P5 1343 aa13.1□□□□□ -0.31
SOD2-216ENST00000546260 VGLL3A8MV65 326 aa13.1□□□□□ -0.31
SOD2-216ENST00000546260 NASPP49321 788 aaPredicted RBP13.1□□□□□ -0.31
SOD2-216ENST00000546260 TPRNQ4KMQ1 711 aa13.1□□□□□ -0.31
SOD2-216ENST00000546260 CC2D1BQ5T0F9 858 aaKnown RBP13.1□□□□□ -0.31
SOD2-216ENST00000546260 PLCB2Q00722 1185 aa13.09□□□□□ -0.31
SOD2-216ENST00000546260 CBX1P83916 185 aa13.09□□□□□ -0.31
SOD2-216ENST00000546260 WIZO95785 1651 aa13.08□□□□□ -0.32
SOD2-216ENST00000546260 ZSCAN30Q86W11 494 aa13.07□□□□□ -0.32
SOD2-216ENST00000546260 FHAD1B1AJZ9 1412 aa13.07□□□□□ -0.32
SOD2-216ENST00000546260 DDX49Q9Y6V7 483 aaKnown RBP13.07□□□□□ -0.32
SOD2-216ENST00000546260 MAPKBP1O60336 1514 aa13.07□□□□□ -0.32
SOD2-216ENST00000546260 ARID3CA6NKF2 412 aa13.06□□□□□ -0.32
SOD2-216ENST00000546260 SLC4A1APQ9BWU0 796 aaKnown RBP13.06□□□□□ -0.32
SOD2-216ENST00000546260 XPCQ01831 940 aaPredicted RBP13.05□□□□□ -0.32
SOD2-216ENST00000546260 PNISRQ8TF01 805 aaKnown RBP13.05□□□□□ -0.32
SOD2-216ENST00000546260 TNNT3P45378 269 aaPredicted RBP13.05□□□□□ -0.32
SOD2-216ENST00000546260 TAF7LQ5H9L4 462 aa13.05□□□□□ -0.32
SOD2-216ENST00000546260 CGNQ9P2M7 1197 aaKnown RBP13.05□□□□□ -0.32
SOD2-216ENST00000546260 CCDC173Q0VFZ6 552 aa13.04□□□□□ -0.32
SOD2-216ENST00000546260 CARD11Q9BXL7 1154 aa13.04□□□□□ -0.32
SOD2-216ENST00000546260 C20orf194Q5TEA3 1177 aa13.04□□□□□ -0.32
SOD2-216ENST00000546260 SMAP1Q8IYB5 467 aaPredicted RBP13.04□□□□□ -0.32
SOD2-216ENST00000546260 MTUS2Q5JR59 1369 aa13.03□□□□□ -0.32
SOD2-216ENST00000546260 CSPP1Q1MSJ5 1256 aa13.03□□□□□ -0.32
SOD2-216ENST00000546260 CHAF1AQ13111 956 aaPredicted RBP13.03□□□□□ -0.32
SOD2-216ENST00000546260 KIAA2012Q0VF49 1180 aa13.03□□□□□ -0.32
SOD2-216ENST00000546260 E9PSI1 815 aa13.02□□□□□ -0.32
SOD2-216ENST00000546260 CHMP4AQ9BY43 222 aa13.02□□□□□ -0.32
SOD2-216ENST00000546260 C8orf34Q49A92 452 aa13.02□□□□□ -0.32
SOD2-216ENST00000546260 SKOR2Q2VWA4 1001 aaPredicted RBP13.01□□□□□ -0.33
SOD2-216ENST00000546260 AEBP1Q8IUX7 1158 aa13□□□□□ -0.33
SOD2-216ENST00000546260 RALBP1Q15311 655 aa13□□□□□ -0.33
SOD2-216ENST00000546260 MYBBP1AQ9BQG0 1328 aaKnown RBP13□□□□□ -0.33
SOD2-216ENST00000546260 IGSF3O75054 1194 aa13□□□□□ -0.33
SOD2-216ENST00000546260 MAPK8IP3Q9UPT6 1336 aa13□□□□□ -0.33
SOD2-216ENST00000546260 NLRP13Q86W25 1043 aa12.99□□□□□ -0.33
SOD2-216ENST00000546260 PTMSP20962 102 aa12.99□□□□□ -0.33
SOD2-216ENST00000546260 PPP4R3BQ5MIZ7 849 aa12.99□□□□□ -0.33
SOD2-216ENST00000546260 RNF123Q5XPI4 1314 aa12.99□□□□□ -0.33
SOD2-216ENST00000546260 TBC1D2Q9BYX2 928 aa12.98□□□□□ -0.33
SOD2-216ENST00000546260 ISY1Q9ULR0 285 aaKnown RBP12.98□□□□□ -0.33
SOD2-216ENST00000546260 MPNDQ8N594 471 aa12.98□□□□□ -0.33
SOD2-216ENST00000546260 PHLDB1Q86UU1 1377 aa12.98□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 13.5 ms