RNA–Protein interactions for RNA: ENST00000546211.5

SKP2-208, Transcript of S-phase kinase associated protein 2, humanhuman

TSL 5 BASIC

Gene SKP2, Length 1,589 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKP2-208ENST00000546211 ASXL2Q76L83 1435 aa29.02■■■□□ 2.24
SKP2-208ENST00000546211 SETD5Q9C0A6 1442 aa29■■■□□ 2.23
SKP2-208ENST00000546211 CYB5RLQ6IPT4 315 aa29■■■□□ 2.23
SKP2-208ENST00000546211 DNMT1P26358 1616 aaKnown RBP28.99■■■□□ 2.23
SKP2-208ENST00000546211 MYO5CQ9NQX4 1742 aa28.98■■■□□ 2.23
SKP2-208ENST00000546211 DAPK1P53355 1430 aa28.97■■■□□ 2.23
SKP2-208ENST00000546211 CDC42BPBQ9Y5S2 1711 aa28.97■■■□□ 2.23
SKP2-208ENST00000546211 ZEB1P37275 1124 aaPredicted RBP28.96■■■□□ 2.23
SKP2-208ENST00000546211 ARHGAP5Q13017 1502 aa28.95■■■□□ 2.22
SKP2-208ENST00000546211 RAB3GAP2Q9H2M9 1393 aa28.95■■■□□ 2.22
SKP2-208ENST00000546211 ABCC5O15440 1437 aa28.94■■■□□ 2.22
SKP2-208ENST00000546211 HFM1A2PYH4 1435 aa28.92■■■□□ 2.22
SKP2-208ENST00000546211 PLCH2O75038 1416 aa28.91■■■□□ 2.22
SKP2-208ENST00000546211 CHIC2Q9UKJ5 165 aa28.89■■■□□ 2.22
SKP2-208ENST00000546211 ABCA9Q8IUA7 1624 aa28.89■■■□□ 2.21
SKP2-208ENST00000546211 SAMD9LQ8IVG5 1584 aa28.89■■■□□ 2.21
SKP2-208ENST00000546211 AKNAQ7Z591 1439 aa28.89■■■□□ 2.21
SKP2-208ENST00000546211 ARAP3Q8WWN8 1544 aa28.85■■■□□ 2.21
SKP2-208ENST00000546211 NAIPQ13075 1403 aa28.85■■■□□ 2.21
SKP2-208ENST00000546211 ROCK1Q13464 1354 aa28.85■■■□□ 2.21
SKP2-208ENST00000546211 MAPKBP1O60336 1514 aa28.84■■■□□ 2.21
SKP2-208ENST00000546211 CROCC2H7BZ55 1655 aa28.84■■■□□ 2.21
SKP2-208ENST00000546211 PLEKHH2Q8IVE3 1493 aa28.84■■■□□ 2.21
SKP2-208ENST00000546211 EFCAB2Q5VUJ9 269 aa28.84■■■□□ 2.21
SKP2-208ENST00000546211 ARHGEF5Q12774 1597 aa28.83■■■□□ 2.21
SKP2-208ENST00000546211 GCC2Q8IWJ2 1684 aa28.81■■■□□ 2.2
SKP2-208ENST00000546211 RRP7BPQ9NSQ0 103 aa28.81■■■□□ 2.2
SKP2-208ENST00000546211 RSPH4AQ5TD94 716 aa28.8■■■□□ 2.2
SKP2-208ENST00000546211 DHX57Q6P158 1386 aaKnown RBP28.8■■■□□ 2.2
SKP2-208ENST00000546211 MBD5Q9P267 1494 aa28.8■■■□□ 2.2
SKP2-208ENST00000546211 SHANK2Q9UPX8 1470 aa28.8■■■□□ 2.2
SKP2-208ENST00000546211 HNRNPMP52272 730 aaKnown RBP eCLIP28.79■■■□□ 2.2
SKP2-208ENST00000546211 KIAA1107Q9UPP5 1409 aa28.78■■■□□ 2.2
SKP2-208ENST00000546211 ADGBQ8N7X0 1667 aa28.78■■■□□ 2.2
SKP2-208ENST00000546211 CCDC141Q6ZP82 1450 aa28.77■■■□□ 2.2
SKP2-208ENST00000546211 SYCP2Q9BX26 1530 aa28.77■■■□□ 2.2
SKP2-208ENST00000546211 TSPY4P0CV99 314 aa28.76■■■□□ 2.19
SKP2-208ENST00000546211 TSPY10P0CW01 314 aa28.76■■■□□ 2.19
SKP2-208ENST00000546211 ADGRL2O95490 1459 aa28.76■■■□□ 2.19
SKP2-208ENST00000546211 C9orf84Q5VXU9 1444 aa28.73■■■□□ 2.19
SKP2-208ENST00000546211 ANKRD30AQ9BXX3 1397 aa28.73■■■□□ 2.19
SKP2-208ENST00000546211 FANCAO15360 1455 aa28.72■■■□□ 2.19
SKP2-208ENST00000546211 ABCC1P33527 1531 aa28.72■■■□□ 2.19
SKP2-208ENST00000546211 CLSPNQ9HAW4 1339 aa28.71■■■□□ 2.19
SKP2-208ENST00000546211 NCOA1Q15788 1441 aa28.71■■■□□ 2.19
SKP2-208ENST00000546211 CD109Q6YHK3 1445 aa28.69■■■□□ 2.18
SKP2-208ENST00000546211 ARHGEF12Q9NZN5 1544 aa28.66■■■□□ 2.18
SKP2-208ENST00000546211 ACIN1Q9UKV3 1341 aaKnown RBP28.65■■■□□ 2.18
SKP2-208ENST00000546211 MAST1Q9Y2H9 1570 aa28.64■■■□□ 2.18
SKP2-208ENST00000546211 CFAP74Q9C0B2 1584 aa28.62■■■□□ 2.17
SKP2-208ENST00000546211 KDM6BO15054 1643 aa28.62■■■□□ 2.17
SKP2-208ENST00000546211 GLI2P10070 1586 aa28.61■■■□□ 2.17
SKP2-208ENST00000546211 ADGRL1O94910 1474 aa28.59■■■□□ 2.17
SKP2-208ENST00000546211 TRAPPC8Q9Y2L5 1435 aa28.57■■■□□ 2.16
SKP2-208ENST00000546211 KIF15Q9NS87 1388 aa28.56■■■□□ 2.16
SKP2-208ENST00000546211 SCAPERQ9BY12 1400 aa28.55■■■□□ 2.16
SKP2-208ENST00000546211 TRIM52Q96A61 297 aa28.55■■■□□ 2.16
SKP2-208ENST00000546211 MAP3K4Q9Y6R4 1608 aa28.55■■■□□ 2.16
SKP2-208ENST00000546211 DIP2BQ9P265 1576 aa28.55■■■□□ 2.16
SKP2-208ENST00000546211 ANKRD50Q9ULJ7 1429 aa28.55■■■□□ 2.16
SKP2-208ENST00000546211 PLXNC1O60486 1568 aa28.53■■■□□ 2.16
SKP2-208ENST00000546211 FAM69CQ0P6D2 419 aa28.51■■■□□ 2.15
SKP2-208ENST00000546211 NEO1Q92859 1461 aa28.51■■■□□ 2.15
SKP2-208ENST00000546211 SPAG9O60271 1321 aaKnown RBP28.49■■■□□ 2.15
SKP2-208ENST00000546211 RTEL1-TNFRSF6BF6WH68 1400 aa28.49■■■□□ 2.15
SKP2-208ENST00000546211 AFAP1Q8N556 730 aa28.49■■■□□ 2.15
SKP2-208ENST00000546211 ZNF518AQ6AHZ1 1483 aa28.44■■■□□ 2.14
SKP2-208ENST00000546211 ZFYVE16Q7Z3T8 1539 aa28.43■■■□□ 2.14
SKP2-208ENST00000546211 DUOX2Q9NRD8 1548 aa28.43■■■□□ 2.14
SKP2-208ENST00000546211 INO80Q9ULG1 1556 aaPredicted RBP28.41■■■□□ 2.14
SKP2-208ENST00000546211 MPHOSPH9Q99550 1183 aa28.41■■■□□ 2.14
SKP2-208ENST00000546211 ATP7AQ04656 1500 aa28.4■■■□□ 2.14
SKP2-208ENST00000546211 POGZQ7Z3K3 1410 aa28.39■■■□□ 2.14
SKP2-208ENST00000546211 MYT1LQ9UL68 1186 aa28.37■■■□□ 2.13
SKP2-208ENST00000546211 ERBINQ96RT1 1412 aa28.36■■■□□ 2.13
SKP2-208ENST00000546211 DENND4BO75064 1496 aaPredicted RBP28.35■■■□□ 2.13
SKP2-208ENST00000546211 TEX14Q8IWB6 1497 aa28.35■■■□□ 2.13
SKP2-208ENST00000546211 KDM5CP41229 1560 aa28.34■■■□□ 2.13
SKP2-208ENST00000546211 SLC4A1APQ9BWU0 796 aaKnown RBP28.34■■■□□ 2.13
SKP2-208ENST00000546211 PZPP20742 1482 aa28.33■■■□□ 2.13
SKP2-208ENST00000546211 KDM5DQ9BY66 1539 aa28.32■■■□□ 2.12
SKP2-208ENST00000546211 KIF13AQ9H1H9 1805 aa28.32■■■□□ 2.12
SKP2-208ENST00000546211 NUP155O75694 1391 aa28.31■■■□□ 2.12
SKP2-208ENST00000546211 PPRC1Q5VV67 1664 aaKnown RBP28.29■■■□□ 2.12
SKP2-208ENST00000546211 TSPOAP1O95153 1857 aa28.29■■■□□ 2.12
SKP2-208ENST00000546211 SIN3AQ96ST3 1273 aa28.28■■■□□ 2.12
SKP2-208ENST00000546211 MLH3Q9UHC1 1453 aa28.28■■■□□ 2.12
SKP2-208ENST00000546211 KIDINS220Q9ULH0 1771 aa28.28■■■□□ 2.12
SKP2-208ENST00000546211 UNC13BO14795 1591 aa28.28■■■□□ 2.12
SKP2-208ENST00000546211 HECW2Q9P2P5 1572 aa28.27■■■□□ 2.12
SKP2-208ENST00000546211 NEUROD1Q13562 356 aa28.27■■■□□ 2.12
SKP2-208ENST00000546211 DNAJC5Q9H3Z4 198 aa28.27■■■□□ 2.12
SKP2-208ENST00000546211 RAPGEF3O95398 923 aa28.24■■■□□ 2.11
SKP2-208ENST00000546211 RICTORQ6R327 1708 aa28.23■■■□□ 2.11
SKP2-208ENST00000546211 DHX29Q7Z478 1369 aaKnown RBP28.22■■■□□ 2.11
SKP2-208ENST00000546211 TIMELESSQ9UNS1 1208 aa28.22■■■□□ 2.11
SKP2-208ENST00000546211 FOXD1Q16676 465 aa28.2■■■□□ 2.1
SKP2-208ENST00000546211 MAGI2Q86UL8 1455 aa28.19■■■□□ 2.1
SKP2-208ENST00000546211 FAM135AQ9P2D6 1515 aa28.19■■■□□ 2.1
SKP2-208ENST00000546211 EIF2AK4Q9P2K8 1649 aaKnown RBP28.19■■■□□ 2.1
Retrieved 100 of 20,778 RNA–protein pairs in 46.8 ms