RNA–Protein interactions for RNA: ENST00000546089.5

TRPT1-215, Transcript of tRNA phosphotransferase 1, humanhuman

TSL 3 BASIC

Gene TRPT1, Length 684 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRPT1-215ENST00000546089 ADAMTSL3P82987 1691 aa17.61■□□□□ 0.41
TRPT1-215ENST00000546089 BCORL1Q5H9F3 1711 aa17.61■□□□□ 0.41
TRPT1-215ENST00000546089 ARHGEF40Q8TER5 1519 aa17.6■□□□□ 0.41
TRPT1-215ENST00000546089 AKNAQ7Z591 1439 aa17.59■□□□□ 0.41
TRPT1-215ENST00000546089 KANK4Q5T7N3 995 aaPredicted RBP17.59■□□□□ 0.41
TRPT1-215ENST00000546089 PPARGC1BQ86YN6 1023 aaKnown RBP17.59■□□□□ 0.41
TRPT1-215ENST00000546089 RIMS1Q86UR5 1692 aaKnown RBP17.58■□□□□ 0.4
TRPT1-215ENST00000546089 DENND4BO75064 1496 aaPredicted RBP17.56■□□□□ 0.4
TRPT1-215ENST00000546089 PHLDB1Q86UU1 1377 aa17.55■□□□□ 0.4
TRPT1-215ENST00000546089 ARID4BQ4LE39 1312 aaPredicted RBP17.54■□□□□ 0.4
TRPT1-215ENST00000546089 EHBP1L1Q8N3D4 1523 aa17.53■□□□□ 0.4
TRPT1-215ENST00000546089 PCGF6Q9BYE7 350 aa17.53■□□□□ 0.4
TRPT1-215ENST00000546089 ZFYVE16Q7Z3T8 1539 aa17.52■□□□□ 0.4
TRPT1-215ENST00000546089 YEATS2Q9ULM3 1422 aa17.52■□□□□ 0.4
TRPT1-215ENST00000546089 PTPRMP28827 1452 aa17.51■□□□□ 0.39
TRPT1-215ENST00000546089 ZMYM4Q5VZL5 1548 aa17.51■□□□□ 0.39
TRPT1-215ENST00000546089 MTUS2Q5JR59 1369 aa17.51■□□□□ 0.39
TRPT1-215ENST00000546089 PLPPR3Q6T4P5 718 aa17.5■□□□□ 0.39
TRPT1-215ENST00000546089 CDC42BPBQ9Y5S2 1711 aa17.5■□□□□ 0.39
TRPT1-215ENST00000546089 ARHGAP5Q13017 1502 aa17.48■□□□□ 0.39
TRPT1-215ENST00000546089 FER1L4A9Z1Z3 1794 aa17.48■□□□□ 0.39
TRPT1-215ENST00000546089 PLCH2O75038 1416 aa17.47■□□□□ 0.39
TRPT1-215ENST00000546089 SCAPERQ9BY12 1400 aa17.47■□□□□ 0.39
TRPT1-215ENST00000546089 POGZQ7Z3K3 1410 aa17.47■□□□□ 0.39
TRPT1-215ENST00000546089 RRBP1Q9P2E9 1410 aaKnown RBP17.47■□□□□ 0.39
TRPT1-215ENST00000546089 CDK11AQ9UQ88 783 aaPredicted RBP17.46■□□□□ 0.39
TRPT1-215ENST00000546089 TROQ12816 1431 aaPredicted RBP17.46■□□□□ 0.39
TRPT1-215ENST00000546089 CDC42BPAQ5VT25 1732 aa17.44■□□□□ 0.38
TRPT1-215ENST00000546089 PREX2Q70Z35 1606 aa17.44■□□□□ 0.38
TRPT1-215ENST00000546089 MLECQ14165 292 aa17.44■□□□□ 0.38
TRPT1-215ENST00000546089 SUPT6HQ7KZ85 1726 aaKnown RBP17.43■□□□□ 0.38
TRPT1-215ENST00000546089 ITSN2Q9NZM3 1697 aa17.42■□□□□ 0.38
TRPT1-215ENST00000546089 NCOA2Q15596 1464 aa17.41■□□□□ 0.38
TRPT1-215ENST00000546089 ILDR1Q86SU0 546 aaPredicted RBP17.4■□□□□ 0.38
TRPT1-215ENST00000546089 CCNB3Q8WWL7 1395 aa17.4■□□□□ 0.38
TRPT1-215ENST00000546089 ABCA6Q8N139 1617 aa17.39■□□□□ 0.37
TRPT1-215ENST00000546089 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP17.38■□□□□ 0.37
TRPT1-215ENST00000546089 EFCAB2Q5VUJ9 269 aa17.37■□□□□ 0.37
TRPT1-215ENST00000546089 ABCC1P33527 1531 aa17.37■□□□□ 0.37
TRPT1-215ENST00000546089 KDM5CP41229 1560 aa17.36■□□□□ 0.37
TRPT1-215ENST00000546089 DIP2CQ9Y2E4 1556 aa17.36■□□□□ 0.37
TRPT1-215ENST00000546089 MAGI2Q86UL8 1455 aa17.36■□□□□ 0.37
TRPT1-215ENST00000546089 LMTK3Q96Q04 1460 aa17.36■□□□□ 0.37
TRPT1-215ENST00000546089 MYT1LQ9UL68 1186 aa17.35■□□□□ 0.37
TRPT1-215ENST00000546089 MYOM3Q5VTT5 1437 aa17.35■□□□□ 0.37
TRPT1-215ENST00000546089 ARHGEF12Q9NZN5 1544 aa17.35■□□□□ 0.37
TRPT1-215ENST00000546089 ATP10AO60312 1499 aa17.34■□□□□ 0.37
TRPT1-215ENST00000546089 C9orf84Q5VXU9 1444 aa17.34■□□□□ 0.37
TRPT1-215ENST00000546089 ZNF518AQ6AHZ1 1483 aa17.34■□□□□ 0.37
TRPT1-215ENST00000546089 FGD6Q6ZV73 1430 aa17.34■□□□□ 0.37
TRPT1-215ENST00000546089 AFAP1Q8N556 730 aa17.34■□□□□ 0.37
TRPT1-215ENST00000546089 SAMD9LQ8IVG5 1584 aa17.32■□□□□ 0.36
TRPT1-215ENST00000546089 MIA2Q96PC5 1412 aa17.32■□□□□ 0.36
TRPT1-215ENST00000546089 TRAPPC8Q9Y2L5 1435 aa17.31■□□□□ 0.36
TRPT1-215ENST00000546089 KIDINS220Q9ULH0 1771 aa17.3■□□□□ 0.36
TRPT1-215ENST00000546089 HSPA2P54652 639 aa17.3■□□□□ 0.36
TRPT1-215ENST00000546089 SYCP2Q9BX26 1530 aa17.29■□□□□ 0.36
TRPT1-215ENST00000546089 ZNF777Q9ULD5 760 aaPredicted RBP17.28■□□□□ 0.36
TRPT1-215ENST00000546089 PREX1Q8TCU6 1659 aa17.27■□□□□ 0.36
TRPT1-215ENST00000546089 TCOF1Q13428 1488 aaKnown RBP17.27■□□□□ 0.36
TRPT1-215ENST00000546089 CEBPAP49715 358 aaPredicted RBP17.26■□□□□ 0.35
TRPT1-215ENST00000546089 C3P01024 1663 aa17.26■□□□□ 0.35
TRPT1-215ENST00000546089 GPATCH8Q9UKJ3 1502 aaKnown RBP17.23■□□□□ 0.35
TRPT1-215ENST00000546089 PTPN23Q9H3S7 1636 aa17.23■□□□□ 0.35
TRPT1-215ENST00000546089 MLH3Q9UHC1 1453 aa17.22■□□□□ 0.35
TRPT1-215ENST00000546089 REREQ9P2R6 1566 aa17.22■□□□□ 0.35
TRPT1-215ENST00000546089 FAM50AQ14320 339 aaKnown RBP17.2■□□□□ 0.34
TRPT1-215ENST00000546089 HNRNPMP52272 730 aaKnown RBP eCLIP17.19■□□□□ 0.34
TRPT1-215ENST00000546089 INO80Q9ULG1 1556 aaPredicted RBP17.19■□□□□ 0.34
TRPT1-215ENST00000546089 ATP7AQ04656 1500 aa17.17■□□□□ 0.34
TRPT1-215ENST00000546089 CLTCQ00610 1675 aaKnown RBP17.16■□□□□ 0.34
TRPT1-215ENST00000546089 STRCQ7RTU9 1775 aa17.15■□□□□ 0.34
TRPT1-215ENST00000546089 CFDP1Q9UEE9 299 aaPredicted RBP17.15■□□□□ 0.34
TRPT1-215ENST00000546089 AGLP35573 1532 aa17.14■□□□□ 0.33
TRPT1-215ENST00000546089 ZNF644Q9H582 1327 aaPredicted RBP17.13■□□□□ 0.33
TRPT1-215ENST00000546089 ADGBQ8N7X0 1667 aa17.13■□□□□ 0.33
TRPT1-215ENST00000546089 SPAG9O60271 1321 aaKnown RBP17.12■□□□□ 0.33
TRPT1-215ENST00000546089 CAMSAP2Q08AD1 1489 aa17.12■□□□□ 0.33
TRPT1-215ENST00000546089 UHRF1BP1Q6BDS2 1440 aa17.1■□□□□ 0.33
TRPT1-215ENST00000546089 PLXNC1O60486 1568 aa17.1■□□□□ 0.33
TRPT1-215ENST00000546089 DNMT1P26358 1616 aaKnown RBP17.09■□□□□ 0.33
TRPT1-215ENST00000546089 MROH2AA6NES4 1674 aa17.09■□□□□ 0.33
TRPT1-215ENST00000546089 PLEKHH2Q8IVE3 1493 aa17.08■□□□□ 0.32
TRPT1-215ENST00000546089 ESF1Q9H501 851 aaKnown RBP17.08■□□□□ 0.32
TRPT1-215ENST00000546089 DAPK1P53355 1430 aa17.07■□□□□ 0.32
TRPT1-215ENST00000546089 PTPRKQ15262 1439 aa17.07■□□□□ 0.32
TRPT1-215ENST00000546089 HRCP23327 699 aa17.07■□□□□ 0.32
TRPT1-215ENST00000546089 ITGAEP38570 1179 aa17.07■□□□□ 0.32
TRPT1-215ENST00000546089 FBXO41Q8TF61 875 aa17.07■□□□□ 0.32
TRPT1-215ENST00000546089 A2MP01023 1474 aa17.06■□□□□ 0.32
TRPT1-215ENST00000546089 HFM1A2PYH4 1435 aa17.05■□□□□ 0.32
TRPT1-215ENST00000546089 ABCC5O15440 1437 aa17.05■□□□□ 0.32
TRPT1-215ENST00000546089 SETD5Q9C0A6 1442 aa17.05■□□□□ 0.32
TRPT1-215ENST00000546089 KIAA1107Q9UPP5 1409 aa17.05■□□□□ 0.32
TRPT1-215ENST00000546089 SETD1BQ9UPS6 1966 aaKnown RBP17.05■□□□□ 0.32
TRPT1-215ENST00000546089 ARHGEF5Q12774 1597 aa17.05■□□□□ 0.32
TRPT1-215ENST00000546089 ROCK1Q13464 1354 aa17.04■□□□□ 0.32
TRPT1-215ENST00000546089 MYO3AQ8NEV4 1616 aa17.04■□□□□ 0.32
TRPT1-215ENST00000546089 SHANK2Q9UPX8 1470 aa17.04■□□□□ 0.32
TRPT1-215ENST00000546089 RSPH4AQ5TD94 716 aa17.03■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 81.4 ms