RNA–Protein interactions for RNA: ENST00000545784.5

LINC00939-203, long intergenic non-protein coding RNA 939, humanhuman

TSL 1 (best)

Gene LINC00939, Length 2,078 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00939-203ENST00000545784 PHLDB1Q86UU1 1377 aa15.93■□□□□ 0.14
LINC00939-203ENST00000545784 CFDP1Q9UEE9 299 aaPredicted RBP15.91■□□□□ 0.14
LINC00939-203ENST00000545784 ZEB1P37275 1124 aaPredicted RBP15.91■□□□□ 0.14
LINC00939-203ENST00000545784 FANCAO15360 1455 aa15.91■□□□□ 0.14
LINC00939-203ENST00000545784 NEO1Q92859 1461 aa15.91■□□□□ 0.14
LINC00939-203ENST00000545784 AKNAQ7Z591 1439 aa15.9■□□□□ 0.14
LINC00939-203ENST00000545784 COL17A1Q9UMD9 1497 aaPredicted RBP15.89■□□□□ 0.13
LINC00939-203ENST00000545784 CDC42BPAQ5VT25 1732 aa15.89■□□□□ 0.13
LINC00939-203ENST00000545784 MYO5CQ9NQX4 1742 aa15.89■□□□□ 0.13
LINC00939-203ENST00000545784 CDC42BPBQ9Y5S2 1711 aa15.88■□□□□ 0.13
LINC00939-203ENST00000545784 ZNF644Q9H582 1327 aaPredicted RBP15.88■□□□□ 0.13
LINC00939-203ENST00000545784 PREX2Q70Z35 1606 aa15.88■□□□□ 0.13
LINC00939-203ENST00000545784 ARHGAP5Q13017 1502 aa15.88■□□□□ 0.13
LINC00939-203ENST00000545784 MYOM3Q5VTT5 1437 aa15.88■□□□□ 0.13
LINC00939-203ENST00000545784 ZNF777Q9ULD5 760 aaPredicted RBP15.86■□□□□ 0.13
LINC00939-203ENST00000545784 MIA2Q96PC5 1412 aa15.85■□□□□ 0.13
LINC00939-203ENST00000545784 ARHGEF12Q9NZN5 1544 aa15.84■□□□□ 0.13
LINC00939-203ENST00000545784 SCAPERQ9BY12 1400 aa15.83■□□□□ 0.13
LINC00939-203ENST00000545784 RAPGEF3O95398 923 aa15.83■□□□□ 0.12
LINC00939-203ENST00000545784 KIAA1107Q9UPP5 1409 aa15.83■□□□□ 0.12
LINC00939-203ENST00000545784 ADGRL1O94910 1474 aa15.82■□□□□ 0.12
LINC00939-203ENST00000545784 FGD6Q6ZV73 1430 aa15.82■□□□□ 0.12
LINC00939-203ENST00000545784 SAMD9LQ8IVG5 1584 aa15.82■□□□□ 0.12
LINC00939-203ENST00000545784 CFAP74Q9C0B2 1584 aa15.82■□□□□ 0.12
LINC00939-203ENST00000545784 HNRNPMP52272 730 aaKnown RBP eCLIP15.82■□□□□ 0.12
LINC00939-203ENST00000545784 ITSN2Q9NZM3 1697 aa15.81■□□□□ 0.12
LINC00939-203ENST00000545784 DENND4BO75064 1496 aaPredicted RBP15.8■□□□□ 0.12
LINC00939-203ENST00000545784 AFAP1Q8N556 730 aa15.8■□□□□ 0.12
LINC00939-203ENST00000545784 MBD5Q9P267 1494 aa15.8■□□□□ 0.12
LINC00939-203ENST00000545784 ABCC1P33527 1531 aa15.79■□□□□ 0.12
LINC00939-203ENST00000545784 PLEKHH2Q8IVE3 1493 aa15.79■□□□□ 0.12
LINC00939-203ENST00000545784 TRAPPC8Q9Y2L5 1435 aa15.79■□□□□ 0.12
LINC00939-203ENST00000545784 CAMSAP2Q08AD1 1489 aa15.79■□□□□ 0.12
LINC00939-203ENST00000545784 TCOF1Q13428 1488 aaKnown RBP15.77■□□□□ 0.12
LINC00939-203ENST00000545784 POGZQ7Z3K3 1410 aa15.77■□□□□ 0.12
LINC00939-203ENST00000545784 KDM6BO15054 1643 aa15.77■□□□□ 0.12
LINC00939-203ENST00000545784 SYCP2Q9BX26 1530 aa15.76■□□□□ 0.11
LINC00939-203ENST00000545784 FRMPD1Q5SYB0 1578 aa15.75■□□□□ 0.11
LINC00939-203ENST00000545784 RSPH4AQ5TD94 716 aa15.75■□□□□ 0.11
LINC00939-203ENST00000545784 PTPN23Q9H3S7 1636 aa15.75■□□□□ 0.11
LINC00939-203ENST00000545784 RRBP1Q9P2E9 1410 aaKnown RBP15.73■□□□□ 0.11
LINC00939-203ENST00000545784 ZNF518AQ6AHZ1 1483 aa15.73■□□□□ 0.11
LINC00939-203ENST00000545784 RICTORQ6R327 1708 aa15.72■□□□□ 0.11
LINC00939-203ENST00000545784 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP15.72■□□□□ 0.11
LINC00939-203ENST00000545784 FAM50AQ14320 339 aaKnown RBP15.72■□□□□ 0.11
LINC00939-203ENST00000545784 KDM5CP41229 1560 aa15.71■□□□□ 0.11
LINC00939-203ENST00000545784 ABCC5O15440 1437 aa15.71■□□□□ 0.11
LINC00939-203ENST00000545784 ARHGEF5Q12774 1597 aa15.7■□□□□ 0.1
LINC00939-203ENST00000545784 ZMYM4Q5VZL5 1548 aa15.69■□□□□ 0.1
LINC00939-203ENST00000545784 SPAG9O60271 1321 aaKnown RBP15.69■□□□□ 0.1
LINC00939-203ENST00000545784 CCDC141Q6ZP82 1450 aa15.69■□□□□ 0.1
LINC00939-203ENST00000545784 MLH3Q9UHC1 1453 aa15.69■□□□□ 0.1
LINC00939-203ENST00000545784 MAGI2Q86UL8 1455 aa15.68■□□□□ 0.1
LINC00939-203ENST00000545784 TSPY4P0CV99 314 aa15.67■□□□□ 0.1
LINC00939-203ENST00000545784 TSPY10P0CW01 314 aa15.67■□□□□ 0.1
LINC00939-203ENST00000545784 DAPK1P53355 1430 aa15.67■□□□□ 0.1
LINC00939-203ENST00000545784 YEATS2Q9ULM3 1422 aa15.67■□□□□ 0.1
LINC00939-203ENST00000545784 RTEL1-TNFRSF6BF6WH68 1400 aa15.66■□□□□ 0.1
LINC00939-203ENST00000545784 PTPRKQ15262 1439 aa15.66■□□□□ 0.1
LINC00939-203ENST00000545784 DNMT1P26358 1616 aaKnown RBP15.63■□□□□ 0.09
LINC00939-203ENST00000545784 C9orf84Q5VXU9 1444 aa15.63■□□□□ 0.09
LINC00939-203ENST00000545784 ZFYVE16Q7Z3T8 1539 aa15.62■□□□□ 0.09
LINC00939-203ENST00000545784 SHANK2Q9UPX8 1470 aa15.62■□□□□ 0.09
LINC00939-203ENST00000545784 KIDINS220Q9ULH0 1771 aa15.62■□□□□ 0.09
LINC00939-203ENST00000545784 CHIC2Q9UKJ5 165 aa15.62■□□□□ 0.09
LINC00939-203ENST00000545784 HECW2Q9P2P5 1572 aa15.62■□□□□ 0.09
LINC00939-203ENST00000545784 MYT1LQ9UL68 1186 aa15.61■□□□□ 0.09
LINC00939-203ENST00000545784 ATP7AQ04656 1500 aa15.61■□□□□ 0.09
LINC00939-203ENST00000545784 ATP10AO60312 1499 aa15.61■□□□□ 0.09
LINC00939-203ENST00000545784 INO80Q9ULG1 1556 aaPredicted RBP15.61■□□□□ 0.09
LINC00939-203ENST00000545784 MAST1Q9Y2H9 1570 aa15.61■□□□□ 0.09
LINC00939-203ENST00000545784 ITGAEP38570 1179 aa15.6■□□□□ 0.09
LINC00939-203ENST00000545784 ARHGEF40Q8TER5 1519 aa15.59■□□□□ 0.09
LINC00939-203ENST00000545784 NCOA1Q15788 1441 aa15.59■□□□□ 0.09
LINC00939-203ENST00000545784 DIP2CQ9Y2E4 1556 aa15.58■□□□□ 0.09
LINC00939-203ENST00000545784 ABCA6Q8N139 1617 aa15.57■□□□□ 0.08
LINC00939-203ENST00000545784 RRP7BPQ9NSQ0 103 aa15.57■□□□□ 0.08
LINC00939-203ENST00000545784 ADGRL2O95490 1459 aa15.57■□□□□ 0.08
LINC00939-203ENST00000545784 CROCC2H7BZ55 1655 aa15.56■□□□□ 0.08
LINC00939-203ENST00000545784 ROCK1Q13464 1354 aa15.56■□□□□ 0.08
LINC00939-203ENST00000545784 DHX29Q7Z478 1369 aaKnown RBP15.56■□□□□ 0.08
LINC00939-203ENST00000545784 ANKRD30AQ9BXX3 1397 aa15.56■□□□□ 0.08
LINC00939-203ENST00000545784 A2MP01023 1474 aa15.54■□□□□ 0.08
LINC00939-203ENST00000545784 KIF15Q9NS87 1388 aa15.54■□□□□ 0.08
LINC00939-203ENST00000545784 REREQ9P2R6 1566 aa15.53■□□□□ 0.08
LINC00939-203ENST00000545784 PLXNC1O60486 1568 aa15.53■□□□□ 0.08
LINC00939-203ENST00000545784 SIGLEC1Q9BZZ2 1709 aa15.52■□□□□ 0.07
LINC00939-203ENST00000545784 AGLP35573 1532 aa15.5■□□□□ 0.07
LINC00939-203ENST00000545784 ARID4BQ4LE39 1312 aaPredicted RBP15.5■□□□□ 0.07
LINC00939-203ENST00000545784 DUOX2Q9NRD8 1548 aa15.49■□□□□ 0.07
LINC00939-203ENST00000545784 ADGBQ8N7X0 1667 aa15.49■□□□□ 0.07
LINC00939-203ENST00000545784 PELP1Q8IZL8 1130 aaKnown RBP15.49■□□□□ 0.07
LINC00939-203ENST00000545784 KIF3BO15066 747 aa15.47■□□□□ 0.07
LINC00939-203ENST00000545784 NAIPQ13075 1403 aa15.47■□□□□ 0.07
LINC00939-203ENST00000545784 HFM1A2PYH4 1435 aa15.46■□□□□ 0.07
LINC00939-203ENST00000545784 ERBINQ96RT1 1412 aa15.46■□□□□ 0.07
LINC00939-203ENST00000545784 ANKRD50Q9ULJ7 1429 aa15.46■□□□□ 0.07
LINC00939-203ENST00000545784 MLECQ14165 292 aa15.45■□□□□ 0.06
LINC00939-203ENST00000545784 KDM4FA0A1W2PPD8 638 aa15.44■□□□□ 0.06
LINC00939-203ENST00000545784 GGT6Q6P531 493 aa15.43■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms