RNA–Protein interactions for RNA: ENST00000545658.1

LRP6-207, Transcript of LDL receptor related protein 6, humanhuman

TSL 3

Gene LRP6, Length 435 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRP6-207ENST00000545658 CDAN1Q8IWY9 1227 aa8.8□□□□□ -1
LRP6-207ENST00000545658 NACADO15069 1562 aa8.79□□□□□ -1
LRP6-207ENST00000545658 DCAF8L2P0C7V8 631 aa8.78□□□□□ -1
LRP6-207ENST00000545658 HOXB3P14651 431 aaPredicted RBP8.78□□□□□ -1
LRP6-207ENST00000545658 PPP1R37O75864 691 aa8.77□□□□□ -1.01
LRP6-207ENST00000545658 ZNF710Q8N1W2 664 aa8.77□□□□□ -1.01
LRP6-207ENST00000545658 EMP3P54852 163 aa8.76□□□□□ -1.01
LRP6-207ENST00000545658 DOK7Q18PE1 504 aa8.76□□□□□ -1.01
LRP6-207ENST00000545658 NKX1-1Q15270 411 aaPredicted RBP8.72□□□□□ -1.01
LRP6-207ENST00000545658 RIMBP2O15034 1052 aa8.71□□□□□ -1.02
LRP6-207ENST00000545658 CECR2Q9BXF3 1484 aa8.7□□□□□ -1.02
LRP6-207ENST00000545658 BICRAQ9NZM4 1560 aa8.7□□□□□ -1.02
LRP6-207ENST00000545658 C2orf72A6NCS6 295 aa8.7□□□□□ -1.02
LRP6-207ENST00000545658 FAM205CA6NFA0 338 aa8.7□□□□□ -1.02
LRP6-207ENST00000545658 UNC13AQ9UPW8 1703 aa8.69□□□□□ -1.02
LRP6-207ENST00000545658 HOXB1P14653 301 aaPredicted RBP8.69□□□□□ -1.02
LRP6-207ENST00000545658 TMC2Q8TDI7 906 aa8.68□□□□□ -1.02
LRP6-207ENST00000545658 POTEB3A0JP26 581 aa8.67□□□□□ -1.02
LRP6-207ENST00000545658 KIF3CO14782 793 aa8.67□□□□□ -1.02
LRP6-207ENST00000545658 MMRN1Q13201 1228 aa8.67□□□□□ -1.02
LRP6-207ENST00000545658 POTEBQ6S5H4 581 aa8.67□□□□□ -1.02
LRP6-207ENST00000545658 HS3ST6Q96QI5 342 aa8.67□□□□□ -1.02
LRP6-207ENST00000545658 CC2D2AQ9P2K1 1620 aa8.65□□□□□ -1.03
LRP6-207ENST00000545658 ERBB3P21860 1342 aa8.64□□□□□ -1.03
LRP6-207ENST00000545658 ARSIQ5FYB1 569 aa8.64□□□□□ -1.03
LRP6-207ENST00000545658 ZSWIM6Q9HCJ5 1215 aa8.64□□□□□ -1.03
LRP6-207ENST00000545658 RYDENQ9NUL5 291 aaKnown RBP8.64□□□□□ -1.03
LRP6-207ENST00000545658 GPR153Q6NV75 609 aa8.63□□□□□ -1.03
LRP6-207ENST00000545658 KHSRPQ92945 711 aaKnown RBP eCLIP8.62□□□□□ -1.03
LRP6-207ENST00000545658 SPNS2Q8IVW8 549 aa8.61□□□□□ -1.03
LRP6-207ENST00000545658 GTPBP6O43824 516 aaPredicted RBP8.6□□□□□ -1.03
LRP6-207ENST00000545658 VARS2Q5ST30 1063 aaKnown RBP8.6□□□□□ -1.03
LRP6-207ENST00000545658 AMER1Q5JTC6 1135 aaPredicted RBP8.58□□□□□ -1.04
LRP6-207ENST00000545658 RTN4Q9NQC3 1192 aaKnown RBP8.58□□□□□ -1.04
LRP6-207ENST00000545658 GPHNQ9NQX3 736 aaPredicted RBP8.57□□□□□ -1.04
LRP6-207ENST00000545658 SHROOM4Q9ULL8 1493 aa8.57□□□□□ -1.04
LRP6-207ENST00000545658 PLPP6Q8IY26 295 aa8.56□□□□□ -1.04
LRP6-207ENST00000545658 KRTAP3-3Q9BYR6 98 aa8.56□□□□□ -1.04
LRP6-207ENST00000545658 KRTAP3-2Q9BYR7 98 aa8.56□□□□□ -1.04
LRP6-207ENST00000545658 PCDHGA4Q9Y5G9 962 aa8.56□□□□□ -1.04
LRP6-207ENST00000545658 SLC34A2O95436 690 aa8.55□□□□□ -1.04
LRP6-207ENST00000545658 NUDT7P0C024 238 aa8.55□□□□□ -1.04
LRP6-207ENST00000545658 DSG2Q14126 1118 aa8.55□□□□□ -1.04
LRP6-207ENST00000545658 MYO15BQ96JP2 1530 aa8.54□□□□□ -1.04
LRP6-207ENST00000545658 FOXK1P85037 733 aa8.54□□□□□ -1.04
LRP6-207ENST00000545658 EIF4G1Q04637 1599 aaKnown RBP8.53□□□□□ -1.04
LRP6-207ENST00000545658 ZNF316A6NFI3 1004 aaPredicted RBP8.53□□□□□ -1.04
LRP6-207ENST00000545658 ZNF687Q8N1G0 1237 aa8.5□□□□□ -1.05
LRP6-207ENST00000545658 CRISPLD2Q9H0B8 497 aa8.5□□□□□ -1.05
LRP6-207ENST00000545658 NCKAP5LQ9HCH0 1330 aa8.5□□□□□ -1.05
LRP6-207ENST00000545658 BBXQ8WY36 941 aaPredicted RBP8.49□□□□□ -1.05
LRP6-207ENST00000545658 LHX6Q9UPM6 363 aa8.49□□□□□ -1.05
LRP6-207ENST00000545658 PDE4AP27815 886 aa8.48□□□□□ -1.05
LRP6-207ENST00000545658 PPP1R15BQ5SWA1 713 aa8.48□□□□□ -1.05
LRP6-207ENST00000545658 PTCD2Q8WV60 388 aaKnown RBP8.48□□□□□ -1.05
LRP6-207ENST00000545658 UPF1Q92900 1129 aaKnown RBP eCLIP8.47□□□□□ -1.05
LRP6-207ENST00000545658 LARP6Q9BRS8 491 aaKnown RBP8.47□□□□□ -1.05
LRP6-207ENST00000545658 CUX2O14529 1486 aa8.46□□□□□ -1.05
LRP6-207ENST00000545658 TBC1D12O60347 775 aa8.46□□□□□ -1.06
LRP6-207ENST00000545658 CADPS2Q86UW7 1296 aa8.45□□□□□ -1.06
LRP6-207ENST00000545658 DDX27Q96GQ7 796 aaKnown RBP8.43□□□□□ -1.06
LRP6-207ENST00000545658 KDM4FA0A1W2PPD8 638 aa8.42□□□□□ -1.06
LRP6-207ENST00000545658 ANKRD13DQ6ZTN6 518 aa8.42□□□□□ -1.06
LRP6-207ENST00000545658 OXER1Q8TDS5 423 aa8.42□□□□□ -1.06
LRP6-207ENST00000545658 ZBTB4Q9P1Z0 1013 aaPredicted RBP8.42□□□□□ -1.06
LRP6-207ENST00000545658 AXIN2Q9Y2T1 843 aa8.41□□□□□ -1.06
LRP6-207ENST00000545658 SPRYD3Q8NCJ5 442 aa8.4□□□□□ -1.06
LRP6-207ENST00000545658 MFSD10Q14728 455 aa8.39□□□□□ -1.07
LRP6-207ENST00000545658 PSDA5PKW4 1024 aaPredicted RBP8.38□□□□□ -1.07
LRP6-207ENST00000545658 POTEEQ6S8J3 1075 aa8.38□□□□□ -1.07
LRP6-207ENST00000545658 CFAP44Q96MT7 982 aa8.38□□□□□ -1.07
LRP6-207ENST00000545658 PBX2P40425 430 aa8.37□□□□□ -1.07
LRP6-207ENST00000545658 LSM11P83369 360 aaKnown RBP eCLIP8.37□□□□□ -1.07
LRP6-207ENST00000545658 PAXIP1Q6ZW49 1069 aaPredicted RBP8.37□□□□□ -1.07
LRP6-207ENST00000545658 PPP4R3BQ5MIZ7 849 aa8.36□□□□□ -1.07
LRP6-207ENST00000545658 MAP3K9P80192 1104 aa8.35□□□□□ -1.07
LRP6-207ENST00000545658 SCRIBQ14160 1630 aa8.35□□□□□ -1.07
LRP6-207ENST00000545658 ARHGAP33O14559 1287 aa8.34□□□□□ -1.07
LRP6-207ENST00000545658 EVI5O60447 810 aa8.34□□□□□ -1.07
LRP6-207ENST00000545658 EMILIN3Q9NT22 766 aa8.34□□□□□ -1.07
LRP6-207ENST00000545658 MYT1LQ9UL68 1186 aa8.34□□□□□ -1.07
LRP6-207ENST00000545658 PSEN2P49810 448 aa8.33□□□□□ -1.08
LRP6-207ENST00000545658 ZNF454Q8N9F8 522 aa8.33□□□□□ -1.08
LRP6-207ENST00000545658 ERCC6Q03468 1493 aa8.32□□□□□ -1.08
LRP6-207ENST00000545658 RNF166Q96A37 237 aaPredicted RBP8.32□□□□□ -1.08
LRP6-207ENST00000545658 DMRTA1Q5VZB9 504 aa8.31□□□□□ -1.08
LRP6-207ENST00000545658 KCNK17Q96T54 332 aa8.3□□□□□ -1.08
LRP6-207ENST00000545658 PTGER2P43116 358 aa8.29□□□□□ -1.08
LRP6-207ENST00000545658 ANO8Q9HCE9 1232 aaPredicted RBP8.29□□□□□ -1.08
LRP6-207ENST00000545658 FOSBP53539 338 aa8.28□□□□□ -1.08
LRP6-207ENST00000545658 ADGRD1Q6QNK2 874 aa8.28□□□□□ -1.08
LRP6-207ENST00000545658 DCAF1Q9Y4B6 1507 aa8.28□□□□□ -1.08
LRP6-207ENST00000545658 DPYSL4O14531 572 aa8.27□□□□□ -1.09
LRP6-207ENST00000545658 JPH4Q96JJ6 628 aa8.27□□□□□ -1.09
LRP6-207ENST00000545658 KCNH8Q96L42 1107 aa8.27□□□□□ -1.09
LRP6-207ENST00000545658 CAMK2BQ13554 666 aa8.26□□□□□ -1.09
LRP6-207ENST00000545658 ZCCHC6Q5VYS8 1495 aaKnown RBP8.26□□□□□ -1.09
LRP6-207ENST00000545658 ZDHHC16Q969W1 377 aa8.24□□□□□ -1.09
LRP6-207ENST00000545658 ADAM33Q9BZ11 813 aa8.24□□□□□ -1.09
LRP6-207ENST00000545658 BCL2L12Q9HB09 334 aa8.24□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 34.8 ms