RNA–Protein interactions for RNA: ENST00000544882.1

SCNN1A-222, Transcript of sodium channel epithelial 1 alpha subunit, humanhuman

TSL 3

Gene SCNN1A, Length 585 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCNN1A-222ENST00000544882 ZMYM4Q5VZL5 1548 aa26.21■■□□□ 1.79
SCNN1A-222ENST00000544882 ARID4BQ4LE39 1312 aaPredicted RBP26.2■■□□□ 1.79
SCNN1A-222ENST00000544882 ARHGAP5Q13017 1502 aa26.2■■□□□ 1.79
SCNN1A-222ENST00000544882 POGZQ7Z3K3 1410 aa26.2■■□□□ 1.78
SCNN1A-222ENST00000544882 ZFYVE16Q7Z3T8 1539 aa26.16■■□□□ 1.78
SCNN1A-222ENST00000544882 MAGI2Q86UL8 1455 aa26.16■■□□□ 1.78
SCNN1A-222ENST00000544882 ADAMTSL3P82987 1691 aa26.15■■□□□ 1.78
SCNN1A-222ENST00000544882 YEATS2Q9ULM3 1422 aa26.15■■□□□ 1.78
SCNN1A-222ENST00000544882 CDC42BPBQ9Y5S2 1711 aa26.15■■□□□ 1.78
SCNN1A-222ENST00000544882 BCORL1Q5H9F3 1711 aa26.14■■□□□ 1.78
SCNN1A-222ENST00000544882 PREX2Q70Z35 1606 aa26.12■■□□□ 1.77
SCNN1A-222ENST00000544882 CDC42BPAQ5VT25 1732 aa26.1■■□□□ 1.77
SCNN1A-222ENST00000544882 PTPRMP28827 1452 aa26.07■■□□□ 1.76
SCNN1A-222ENST00000544882 ZNF518AQ6AHZ1 1483 aa26.07■■□□□ 1.76
SCNN1A-222ENST00000544882 AFAP1Q8N556 730 aa26.07■■□□□ 1.76
SCNN1A-222ENST00000544882 VPS8Q8N3P4 1428 aa26.06■■□□□ 1.76
SCNN1A-222ENST00000544882 MADDQ8WXG6 1647 aa26.06■■□□□ 1.76
SCNN1A-222ENST00000544882 SIGLEC1Q9BZZ2 1709 aa26.05■■□□□ 1.76
SCNN1A-222ENST00000544882 HECW2Q9P2P5 1572 aa26.04■■□□□ 1.76
SCNN1A-222ENST00000544882 MTUS2Q5JR59 1369 aa26.03■■□□□ 1.76
SCNN1A-222ENST00000544882 ATP10AO60312 1499 aa26.03■■□□□ 1.76
SCNN1A-222ENST00000544882 KDM5CP41229 1560 aa26.03■■□□□ 1.76
SCNN1A-222ENST00000544882 ABCC1P33527 1531 aa26.02■■□□□ 1.76
SCNN1A-222ENST00000544882 MYT1LQ9UL68 1186 aa26.01■■□□□ 1.75
SCNN1A-222ENST00000544882 ARHGEF12Q9NZN5 1544 aa26■■□□□ 1.75
SCNN1A-222ENST00000544882 GPATCH8Q9UKJ3 1502 aaKnown RBP26■■□□□ 1.75
SCNN1A-222ENST00000544882 ITSN2Q9NZM3 1697 aa25.99■■□□□ 1.75
SCNN1A-222ENST00000544882 C9orf84Q5VXU9 1444 aa25.99■■□□□ 1.75
SCNN1A-222ENST00000544882 TRAPPC8Q9Y2L5 1435 aa25.99■■□□□ 1.75
SCNN1A-222ENST00000544882 ZNF777Q9ULD5 760 aaPredicted RBP25.99■■□□□ 1.75
SCNN1A-222ENST00000544882 RIMS1Q86UR5 1692 aaKnown RBP25.99■■□□□ 1.75
SCNN1A-222ENST00000544882 TIAM1Q13009 1591 aa25.99■■□□□ 1.75
SCNN1A-222ENST00000544882 MLECQ14165 292 aa25.98■■□□□ 1.75
SCNN1A-222ENST00000544882 EHBP1L1Q8N3D4 1523 aa25.98■■□□□ 1.75
SCNN1A-222ENST00000544882 CCNB3Q8WWL7 1395 aa25.96■■□□□ 1.75
SCNN1A-222ENST00000544882 SAMD9LQ8IVG5 1584 aa25.95■■□□□ 1.74
SCNN1A-222ENST00000544882 MLH3Q9UHC1 1453 aa25.94■■□□□ 1.74
SCNN1A-222ENST00000544882 CFDP1Q9UEE9 299 aaPredicted RBP25.94■■□□□ 1.74
SCNN1A-222ENST00000544882 DIP2CQ9Y2E4 1556 aa25.92■■□□□ 1.74
SCNN1A-222ENST00000544882 ABCA6Q8N139 1617 aa25.9■■□□□ 1.74
SCNN1A-222ENST00000544882 FER1L4A9Z1Z3 1794 aa25.9■■□□□ 1.74
SCNN1A-222ENST00000544882 SYCP2Q9BX26 1530 aa25.89■■□□□ 1.74
SCNN1A-222ENST00000544882 HNRNPMP52272 730 aaKnown RBP eCLIP25.88■■□□□ 1.73
SCNN1A-222ENST00000544882 PLPPR3Q6T4P5 718 aa25.88■■□□□ 1.73
SCNN1A-222ENST00000544882 PLEKHH2Q8IVE3 1493 aa25.86■■□□□ 1.73
SCNN1A-222ENST00000544882 KIDINS220Q9ULH0 1771 aa25.86■■□□□ 1.73
SCNN1A-222ENST00000544882 REREQ9P2R6 1566 aa25.86■■□□□ 1.73
SCNN1A-222ENST00000544882 SUPT6HQ7KZ85 1726 aaKnown RBP25.85■■□□□ 1.73
SCNN1A-222ENST00000544882 LRRC9Q6ZRR7 1453 aa25.85■■□□□ 1.73
SCNN1A-222ENST00000544882 KIAA1107Q9UPP5 1409 aa25.85■■□□□ 1.73
SCNN1A-222ENST00000544882 NCOA2Q15596 1464 aa25.85■■□□□ 1.73
SCNN1A-222ENST00000544882 MAP3K1Q13233 1512 aa25.84■■□□□ 1.73
SCNN1A-222ENST00000544882 KANK4Q5T7N3 995 aaPredicted RBP25.84■■□□□ 1.73
SCNN1A-222ENST00000544882 SPAG9O60271 1321 aaKnown RBP25.82■■□□□ 1.72
SCNN1A-222ENST00000544882 ZNF644Q9H582 1327 aaPredicted RBP25.8■■□□□ 1.72
SCNN1A-222ENST00000544882 AGLP35573 1532 aa25.78■■□□□ 1.72
SCNN1A-222ENST00000544882 LMTK3Q96Q04 1460 aa25.77■■□□□ 1.72
SCNN1A-222ENST00000544882 ATP7AQ04656 1500 aa25.75■■□□□ 1.71
SCNN1A-222ENST00000544882 INO80Q9ULG1 1556 aaPredicted RBP25.73■■□□□ 1.71
SCNN1A-222ENST00000544882 CEBPAP49715 358 aaPredicted RBP25.72■■□□□ 1.71
SCNN1A-222ENST00000544882 MBD5Q9P267 1494 aa25.72■■□□□ 1.71
SCNN1A-222ENST00000544882 ESF1Q9H501 851 aaKnown RBP25.69■■□□□ 1.7
SCNN1A-222ENST00000544882 CAMSAP2Q08AD1 1489 aa25.67■■□□□ 1.7
SCNN1A-222ENST00000544882 HSPA2P54652 639 aa25.66■■□□□ 1.7
SCNN1A-222ENST00000544882 A2MP01023 1474 aa25.66■■□□□ 1.7
SCNN1A-222ENST00000544882 PLXNC1O60486 1568 aa25.63■■□□□ 1.69
SCNN1A-222ENST00000544882 SETD1BQ9UPS6 1966 aaKnown RBP25.63■■□□□ 1.69
SCNN1A-222ENST00000544882 RTEL1-TNFRSF6BF6WH68 1400 aa25.62■■□□□ 1.69
SCNN1A-222ENST00000544882 C3P01024 1663 aa25.61■■□□□ 1.69
SCNN1A-222ENST00000544882 ADGBQ8N7X0 1667 aa25.61■■□□□ 1.69
SCNN1A-222ENST00000544882 PREX1Q8TCU6 1659 aa25.61■■□□□ 1.69
SCNN1A-222ENST00000544882 CCDC141Q6ZP82 1450 aa25.61■■□□□ 1.69
SCNN1A-222ENST00000544882 CNTLNQ9NXG0 1405 aa25.61■■□□□ 1.69
SCNN1A-222ENST00000544882 RSPH4AQ5TD94 716 aa25.6■■□□□ 1.69
SCNN1A-222ENST00000544882 MYOM3Q5VTT5 1437 aa25.6■■□□□ 1.69
SCNN1A-222ENST00000544882 APLP2Q06481 763 aa25.59■■□□□ 1.69
SCNN1A-222ENST00000544882 ARHGEF5Q12774 1597 aa25.56■■□□□ 1.68
SCNN1A-222ENST00000544882 GGT6Q6P531 493 aa25.55■■□□□ 1.68
SCNN1A-222ENST00000544882 UHRF1BP1Q6BDS2 1440 aa25.54■■□□□ 1.68
SCNN1A-222ENST00000544882 MROH2AA6NES4 1674 aa25.53■■□□□ 1.68
SCNN1A-222ENST00000544882 DHX29Q7Z478 1369 aaKnown RBP25.53■■□□□ 1.68
SCNN1A-222ENST00000544882 MIA2Q96PC5 1412 aa25.53■■□□□ 1.68
SCNN1A-222ENST00000544882 TSPY4P0CV99 314 aa25.52■■□□□ 1.68
SCNN1A-222ENST00000544882 TSPY10P0CW01 314 aa25.52■■□□□ 1.68
SCNN1A-222ENST00000544882 ILDR1Q86SU0 546 aaPredicted RBP25.52■■□□□ 1.68
SCNN1A-222ENST00000544882 ZMYM3Q14202 1370 aa25.51■■□□□ 1.67
SCNN1A-222ENST00000544882 CLTCQ00610 1675 aaKnown RBP25.51■■□□□ 1.67
SCNN1A-222ENST00000544882 PTPN23Q9H3S7 1636 aa25.48■■□□□ 1.67
SCNN1A-222ENST00000544882 PPP6R1Q9UPN7 881 aa25.47■■□□□ 1.67
SCNN1A-222ENST00000544882 KIF3BO15066 747 aa25.46■■□□□ 1.67
SCNN1A-222ENST00000544882 NPATQ14207 1427 aa25.45■■□□□ 1.66
SCNN1A-222ENST00000544882 FGD6Q6ZV73 1430 aa25.45■■□□□ 1.66
SCNN1A-222ENST00000544882 MAST1Q9Y2H9 1570 aa25.43■■□□□ 1.66
SCNN1A-222ENST00000544882 TCOF1Q13428 1488 aaKnown RBP25.41■■□□□ 1.66
SCNN1A-222ENST00000544882 CROCC2H7BZ55 1655 aa25.4■■□□□ 1.66
SCNN1A-222ENST00000544882 PTPRKQ15262 1439 aa25.39■■□□□ 1.66
SCNN1A-222ENST00000544882 STRCQ7RTU9 1775 aa25.39■■□□□ 1.65
SCNN1A-222ENST00000544882 ABCC5O15440 1437 aa25.37■■□□□ 1.65
SCNN1A-222ENST00000544882 DNMT1P26358 1616 aaKnown RBP25.36■■□□□ 1.65
SCNN1A-222ENST00000544882 PPARGC1BQ86YN6 1023 aaKnown RBP25.35■■□□□ 1.65
Retrieved 100 of 20,778 RNA–protein pairs in 11.2 ms