RNA–Protein interactions for RNA: ENST00000544800.1

CIT-215, Transcript of citron rho-interacting serine/threonine kinase, humanhuman

TSL 4

Gene CIT, Length 564 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIT-215ENST00000544800 ARHGEF12Q9NZN5 1544 aa12.71□□□□□ -0.38
CIT-215ENST00000544800 DENND4BO75064 1496 aaPredicted RBP12.71□□□□□ -0.38
CIT-215ENST00000544800 FHOD3Q2V2M9 1422 aa12.71□□□□□ -0.38
CIT-215ENST00000544800 IQGAP2Q13576 1575 aa12.7□□□□□ -0.38
CIT-215ENST00000544800 NCKAP5LQ9HCH0 1330 aa12.68□□□□□ -0.38
CIT-215ENST00000544800 MAGI2Q86UL8 1455 aa12.65□□□□□ -0.38
CIT-215ENST00000544800 SIGLEC1Q9BZZ2 1709 aa12.65□□□□□ -0.38
CIT-215ENST00000544800 PKD2Q13563 968 aa12.65□□□□□ -0.38
CIT-215ENST00000544800 ZFYVE16Q7Z3T8 1539 aa12.65□□□□□ -0.38
CIT-215ENST00000544800 ABCA9Q8IUA7 1624 aa12.65□□□□□ -0.38
CIT-215ENST00000544800 PTPRKQ15262 1439 aa12.64□□□□□ -0.39
CIT-215ENST00000544800 TRAPPC8Q9Y2L5 1435 aa12.64□□□□□ -0.39
CIT-215ENST00000544800 EFCAB5A4FU69 1503 aa12.64□□□□□ -0.39
CIT-215ENST00000544800 DCAF8L1A6NGE4 600 aa12.64□□□□□ -0.39
CIT-215ENST00000544800 KIAA0556O60303 1618 aa12.63□□□□□ -0.39
CIT-215ENST00000544800 CARMIL1Q5VZK9 1371 aa12.62□□□□□ -0.39
CIT-215ENST00000544800 IFFO2Q5TF58 517 aa12.62□□□□□ -0.39
CIT-215ENST00000544800 CAMSAP1Q5T5Y3 1602 aa12.61□□□□□ -0.39
CIT-215ENST00000544800 UGGT2Q9NYU1 1516 aa12.61□□□□□ -0.39
CIT-215ENST00000544800 ZMYM4Q5VZL5 1548 aa12.6□□□□□ -0.39
CIT-215ENST00000544800 RICTORQ6R327 1708 aa12.59□□□□□ -0.39
CIT-215ENST00000544800 ATP10AO60312 1499 aa12.59□□□□□ -0.39
CIT-215ENST00000544800 ABCA8O94911 1581 aa12.57□□□□□ -0.4
CIT-215ENST00000544800 CPS1P31327 1500 aa12.57□□□□□ -0.4
CIT-215ENST00000544800 ESF1Q9H501 851 aaKnown RBP12.56□□□□□ -0.4
CIT-215ENST00000544800 C9orf84Q5VXU9 1444 aa12.55□□□□□ -0.4
CIT-215ENST00000544800 KIF27Q86VH2 1401 aa12.55□□□□□ -0.4
CIT-215ENST00000544800 SETD1AO15047 1707 aaKnown RBP12.55□□□□□ -0.4
CIT-215ENST00000544800 ARID3CA6NKF2 412 aa12.53□□□□□ -0.4
CIT-215ENST00000544800 ATP10BO94823 1461 aa12.53□□□□□ -0.4
CIT-215ENST00000544800 PLA2R1Q13018 1463 aa12.53□□□□□ -0.4
CIT-215ENST00000544800 FAM9AQ8IZU1 332 aaPredicted RBP12.52□□□□□ -0.41
CIT-215ENST00000544800 ALKQ9UM73 1620 aa12.51□□□□□ -0.41
CIT-215ENST00000544800 TCOF1Q13428 1488 aaKnown RBP12.51□□□□□ -0.41
CIT-215ENST00000544800 HOXD11P31277 338 aaPredicted RBP12.5□□□□□ -0.41
CIT-215ENST00000544800 CNKSR2Q8WXI2 1034 aa12.5□□□□□ -0.41
CIT-215ENST00000544800 SHANK2Q9UPX8 1470 aa12.5□□□□□ -0.41
CIT-215ENST00000544800 RAPGEF2Q9Y4G8 1499 aa12.5□□□□□ -0.41
CIT-215ENST00000544800 HECW1Q76N89 1606 aa12.5□□□□□ -0.41
CIT-215ENST00000544800 C3P01024 1663 aa12.49□□□□□ -0.41
CIT-215ENST00000544800 NPATQ14207 1427 aa12.46□□□□□ -0.41
CIT-215ENST00000544800 ZRANB1Q9UGI0 708 aa12.45□□□□□ -0.42
CIT-215ENST00000544800 GOLGA3Q08378 1498 aa12.45□□□□□ -0.42
CIT-215ENST00000544800 CACNB1Q02641 598 aaPredicted RBP12.44□□□□□ -0.42
CIT-215ENST00000544800 CFAP74Q9C0B2 1584 aa12.43□□□□□ -0.42
CIT-215ENST00000544800 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP12.43□□□□□ -0.42
CIT-215ENST00000544800 HNRNPUL2Q1KMD3 747 aaKnown RBP12.43□□□□□ -0.42
CIT-215ENST00000544800 TRIM52Q96A61 297 aa12.43□□□□□ -0.42
CIT-215ENST00000544800 RBM33Q96EV2 1170 aaKnown RBP12.43□□□□□ -0.42
CIT-215ENST00000544800 SCAPERQ9BY12 1400 aa12.43□□□□□ -0.42
CIT-215ENST00000544800 CNTLNQ9NXG0 1405 aa12.43□□□□□ -0.42
CIT-215ENST00000544800 RNF216Q9NWF9 866 aaPredicted RBP12.4□□□□□ -0.42
CIT-215ENST00000544800 ZNF772Q68DY9 489 aaPredicted RBP12.38□□□□□ -0.43
CIT-215ENST00000544800 AGLP35573 1532 aa12.37□□□□□ -0.43
CIT-215ENST00000544800 ZMYM3Q14202 1370 aa12.36□□□□□ -0.43
CIT-215ENST00000544800 PLEKHD1A6NEE1 506 aa12.36□□□□□ -0.43
CIT-215ENST00000544800 RXRBP28702 533 aa12.35□□□□□ -0.43
CIT-215ENST00000544800 MYT1LQ9UL68 1186 aa12.34□□□□□ -0.43
CIT-215ENST00000544800 FAM135BQ49AJ0 1406 aa12.34□□□□□ -0.43
CIT-215ENST00000544800 LRRC7Q96NW7 1537 aa12.33□□□□□ -0.44
CIT-215ENST00000544800 CEP170BQ9Y4F5 1589 aaPredicted RBP12.32□□□□□ -0.44
CIT-215ENST00000544800 VWDEQ8N2E2 1590 aa12.31□□□□□ -0.44
CIT-215ENST00000544800 ZNF142P52746 1687 aaPredicted RBP12.31□□□□□ -0.44
CIT-215ENST00000544800 REREQ9P2R6 1566 aa12.3□□□□□ -0.44
CIT-215ENST00000544800 CDK12Q9NYV4 1490 aaPredicted RBP12.3□□□□□ -0.44
CIT-215ENST00000544800 SETBP1Q9Y6X0 1596 aa12.3□□□□□ -0.44
CIT-215ENST00000544800 RNF17Q9BXT8 1623 aaKnown RBP12.29□□□□□ -0.44
CIT-215ENST00000544800 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP12.29□□□□□ -0.44
CIT-215ENST00000544800 ANKLE2Q86XL3 938 aa12.29□□□□□ -0.44
CIT-215ENST00000544800 AFAP1Q8N556 730 aa12.29□□□□□ -0.44
CIT-215ENST00000544800 SUPT6HQ7KZ85 1726 aaKnown RBP12.28□□□□□ -0.44
CIT-215ENST00000544800 EFCAB2Q5VUJ9 269 aa12.28□□□□□ -0.44
CIT-215ENST00000544800 RNF39Q9H2S5 420 aa12.28□□□□□ -0.44
CIT-215ENST00000544800 ZNF518AQ6AHZ1 1483 aa12.27□□□□□ -0.44
CIT-215ENST00000544800 PLCH2O75038 1416 aa12.27□□□□□ -0.45
CIT-215ENST00000544800 MYO3AQ8NEV4 1616 aa12.26□□□□□ -0.45
CIT-215ENST00000544800 P3H3Q8IVL6 736 aa12.25□□□□□ -0.45
CIT-215ENST00000544800 A2ML1A8K2U0 1454 aa12.25□□□□□ -0.45
CIT-215ENST00000544800 NEURL4Q96JN8 1562 aa12.25□□□□□ -0.45
CIT-215ENST00000544800 DIP2CQ9Y2E4 1556 aa12.25□□□□□ -0.45
CIT-215ENST00000544800 MROH2AA6NES4 1674 aa12.25□□□□□ -0.45
CIT-215ENST00000544800 MEX3CQ5U5Q3 659 aaKnown RBP12.24□□□□□ -0.45
CIT-215ENST00000544800 JCADQ9P266 1359 aa12.24□□□□□ -0.45
CIT-215ENST00000544800 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP12.22□□□□□ -0.45
CIT-215ENST00000544800 YY1P25490 414 aa12.22□□□□□ -0.45
CIT-215ENST00000544800 NPHP4O75161 1426 aaPredicted RBP12.21□□□□□ -0.45
CIT-215ENST00000544800 NUTM2BA6NNL0 878 aaPredicted RBP12.21□□□□□ -0.45
CIT-215ENST00000544800 NUTM2EB1AL46 878 aaPredicted RBP12.21□□□□□ -0.45
CIT-215ENST00000544800 NCBP3Q53F19 620 aaKnown RBP12.21□□□□□ -0.45
CIT-215ENST00000544800 NUTM2DQ5VT03 806 aaPredicted RBP12.21□□□□□ -0.45
CIT-215ENST00000544800 NUTM2AQ8IVF1 878 aaPredicted RBP12.21□□□□□ -0.45
CIT-215ENST00000544800 DNMT1P26358 1616 aaKnown RBP12.21□□□□□ -0.46
CIT-215ENST00000544800 KDM5CP41229 1560 aa12.21□□□□□ -0.46
CIT-215ENST00000544800 MLH3Q9UHC1 1453 aa12.21□□□□□ -0.46
CIT-215ENST00000544800 MED14O60244 1454 aa12.2□□□□□ -0.46
CIT-215ENST00000544800 SPATA31A6Q5VVP1 1343 aa12.19□□□□□ -0.46
CIT-215ENST00000544800 SYNMO15061 1565 aa12.19□□□□□ -0.46
CIT-215ENST00000544800 THEMISQ8N1K5 641 aaPredicted RBP12.19□□□□□ -0.46
CIT-215ENST00000544800 POLR1AO95602 1720 aaPredicted RBP12.19□□□□□ -0.46
CIT-215ENST00000544800 NUP153P49790 1475 aaKnown RBP12.18□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 10.2 ms