RNA–Protein interactions for RNA: ENST00000544227.5

MMP16-204, Transcript of matrix metallopeptidase 16, humanhuman

TSL 1 (best)

Gene MMP16, Length 1,512 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MMP16-204ENST00000544227 PLCB2Q00722 1185 aa10.18□□□□□ -0.78
MMP16-204ENST00000544227 DPY19L2Q6NUT2 758 aa10.17□□□□□ -0.78
MMP16-204ENST00000544227 IFNLR1Q8IU57 520 aaPredicted RBP10.17□□□□□ -0.78
MMP16-204ENST00000544227 FAM205CA6NFA0 338 aa10.16□□□□□ -0.78
MMP16-204ENST00000544227 BOLA1Q9Y3E2 137 aa10.15□□□□□ -0.78
MMP16-204ENST00000544227 RANGAP1P46060 587 aaPredicted RBP10.14□□□□□ -0.79
MMP16-204ENST00000544227 HS3ST6Q96QI5 342 aa10.14□□□□□ -0.79
MMP16-204ENST00000544227 DNAJC5Q9H3Z4 198 aa10.13□□□□□ -0.79
MMP16-204ENST00000544227 ILDR1Q86SU0 546 aaPredicted RBP10.12□□□□□ -0.79
MMP16-204ENST00000544227 ZNF710Q8N1W2 664 aa10.1□□□□□ -0.79
MMP16-204ENST00000544227 ERICH6Q7L0X2 663 aa10.09□□□□□ -0.79
MMP16-204ENST00000544227 HAP1P54257 671 aaPredicted RBP10.07□□□□□ -0.8
MMP16-204ENST00000544227 GTF3C3Q9Y5Q9 886 aa10.07□□□□□ -0.8
MMP16-204ENST00000544227 POTEB3A0JP26 581 aa10.06□□□□□ -0.8
MMP16-204ENST00000544227 POTEBQ6S5H4 581 aa10.06□□□□□ -0.8
MMP16-204ENST00000544227 TRIM41Q8WV44 630 aa10.06□□□□□ -0.8
MMP16-204ENST00000544227 KRTAP3-3Q9BYR6 98 aa10.06□□□□□ -0.8
MMP16-204ENST00000544227 KRTAP3-2Q9BYR7 98 aa10.06□□□□□ -0.8
MMP16-204ENST00000544227 DOK7Q18PE1 504 aa10.05□□□□□ -0.8
MMP16-204ENST00000544227 MYT1Q01538 1121 aa10.04□□□□□ -0.8
MMP16-204ENST00000544227 EFCAB3Q8N7B9 438 aa10.04□□□□□ -0.8
MMP16-204ENST00000544227 HOXB3P14651 431 aaPredicted RBP10.03□□□□□ -0.8
MMP16-204ENST00000544227 RIMBP2O15034 1052 aa10.02□□□□□ -0.8
MMP16-204ENST00000544227 ERBB3P21860 1342 aa10.02□□□□□ -0.81
MMP16-204ENST00000544227 HOXB1P14653 301 aaPredicted RBP10□□□□□ -0.81
MMP16-204ENST00000544227 NCAPD3P42695 1498 aa9.98□□□□□ -0.81
MMP16-204ENST00000544227 PODXL2Q9NZ53 605 aa9.97□□□□□ -0.81
MMP16-204ENST00000544227 MICALL2Q8IY33 904 aa9.96□□□□□ -0.82
MMP16-204ENST00000544227 CUX2O14529 1486 aa9.95□□□□□ -0.82
MMP16-204ENST00000544227 ATAD2BQ9ULI0 1458 aa9.95□□□□□ -0.82
MMP16-204ENST00000544227 RIOK3O14730 519 aaKnown RBP9.94□□□□□ -0.82
MMP16-204ENST00000544227 ERCC6Q03468 1493 aa9.94□□□□□ -0.82
MMP16-204ENST00000544227 VARS2Q5ST30 1063 aaKnown RBP9.93□□□□□ -0.82
MMP16-204ENST00000544227 SOX12O15370 315 aa9.92□□□□□ -0.82
MMP16-204ENST00000544227 NESP48681 1621 aa9.91□□□□□ -0.82
MMP16-204ENST00000544227 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP9.91□□□□□ -0.82
MMP16-204ENST00000544227 VGFO15240 615 aaPredicted RBP9.91□□□□□ -0.82
MMP16-204ENST00000544227 ZFP91Q96JP5 570 aaPredicted RBP9.91□□□□□ -0.82
MMP16-204ENST00000544227 SMARCA4P51532 1647 aa9.91□□□□□ -0.82
MMP16-204ENST00000544227 ZSWIM6Q9HCJ5 1215 aa9.89□□□□□ -0.83
MMP16-204ENST00000544227 TMEM92Q6UXU6 159 aa9.88□□□□□ -0.83
MMP16-204ENST00000544227 VSIG10Q8N0Z9 540 aa9.88□□□□□ -0.83
MMP16-204ENST00000544227 RNF166Q96A37 237 aaPredicted RBP9.88□□□□□ -0.83
MMP16-204ENST00000544227 PHF8Q9UPP1 1060 aa9.88□□□□□ -0.83
MMP16-204ENST00000544227 SMARCA2P51531 1590 aa9.88□□□□□ -0.83
MMP16-204ENST00000544227 HMGXB3Q12766 1538 aa9.88□□□□□ -0.83
MMP16-204ENST00000544227 RNF25Q96BH1 459 aaPredicted RBP9.87□□□□□ -0.83
MMP16-204ENST00000544227 MS4A4AQ96JQ5 239 aa9.86□□□□□ -0.83
MMP16-204ENST00000544227 TMEM132AQ24JP5 1023 aa9.84□□□□□ -0.83
MMP16-204ENST00000544227 MYT1LQ9UL68 1186 aa9.83□□□□□ -0.84
MMP16-204ENST00000544227 ZNF687Q8N1G0 1237 aa9.82□□□□□ -0.84
MMP16-204ENST00000544227 BAZ1BQ9UIG0 1483 aaKnown RBP9.82□□□□□ -0.84
MMP16-204ENST00000544227 NLRP6P59044 892 aa9.82□□□□□ -0.84
MMP16-204ENST00000544227 GPR153Q6NV75 609 aa9.82□□□□□ -0.84
MMP16-204ENST00000544227 BAZ1AQ9NRL2 1556 aaPredicted RBP9.81□□□□□ -0.84
MMP16-204ENST00000544227 THOC2Q8NI27 1593 aaKnown RBP9.8□□□□□ -0.84
MMP16-204ENST00000544227 ARSIQ5FYB1 569 aa9.8□□□□□ -0.84
MMP16-204ENST00000544227 PEG3Q9GZU2 1588 aa9.79□□□□□ -0.84
MMP16-204ENST00000544227 BCL11BQ9C0K0 894 aaPredicted RBP9.79□□□□□ -0.84
MMP16-204ENST00000544227 MROH2BQ7Z745 1585 aa9.79□□□□□ -0.84
MMP16-204ENST00000544227 STK24Q9Y6E0 443 aa9.77□□□□□ -0.84
MMP16-204ENST00000544227 KIF21AQ7Z4S6 1674 aa9.77□□□□□ -0.85
MMP16-204ENST00000544227 LAMC3Q9Y6N6 1575 aa9.77□□□□□ -0.85
MMP16-204ENST00000544227 KDM2AQ9Y2K7 1162 aa9.77□□□□□ -0.85
MMP16-204ENST00000544227 PTGER2P43116 358 aa9.76□□□□□ -0.85
MMP16-204ENST00000544227 ANKRD13DQ6ZTN6 518 aa9.76□□□□□ -0.85
MMP16-204ENST00000544227 NPM2Q86SE8 214 aaKnown RBP9.75□□□□□ -0.85
MMP16-204ENST00000544227 C14orf37Q86TY3 774 aa9.74□□□□□ -0.85
MMP16-204ENST00000544227 KHSRPQ92945 711 aaKnown RBP eCLIP9.74□□□□□ -0.85
MMP16-204ENST00000544227 ZNF316A6NFI3 1004 aaPredicted RBP9.73□□□□□ -0.85
MMP16-204ENST00000544227 FBXO22Q8NEZ5 403 aa9.72□□□□□ -0.85
MMP16-204ENST00000544227 STK25O00506 426 aa9.72□□□□□ -0.85
MMP16-204ENST00000544227 PDS5BQ9NTI5 1447 aa9.7□□□□□ -0.86
MMP16-204ENST00000544227 MFRPQ9BY79 579 aa9.69□□□□□ -0.86
MMP16-204ENST00000544227 LSM11P83369 360 aaKnown RBP eCLIP9.68□□□□□ -0.86
MMP16-204ENST00000544227 WIZO95785 1651 aa9.68□□□□□ -0.86
MMP16-204ENST00000544227 CADPSQ9ULU8 1353 aa9.68□□□□□ -0.86
MMP16-204ENST00000544227 C2orf72A6NCS6 295 aa9.67□□□□□ -0.86
MMP16-204ENST00000544227 NUDT7P0C024 238 aa9.67□□□□□ -0.86
MMP16-204ENST00000544227 ECM2O94769 699 aaPredicted RBP9.66□□□□□ -0.86
MMP16-204ENST00000544227 EIF5BO60841 1220 aaKnown RBP9.65□□□□□ -0.86
MMP16-204ENST00000544227 TMC2Q8TDI7 906 aa9.65□□□□□ -0.86
MMP16-204ENST00000544227 PBX2P40425 430 aa9.64□□□□□ -0.87
MMP16-204ENST00000544227 MRC2Q9UBG0 1479 aa9.63□□□□□ -0.87
MMP16-204ENST00000544227 KIF3CO14782 793 aa9.63□□□□□ -0.87
MMP16-204ENST00000544227 WDR62O43379 1518 aa9.62□□□□□ -0.87
MMP16-204ENST00000544227 LHX6Q9UPM6 363 aa9.61□□□□□ -0.87
MMP16-204ENST00000544227 PCDHGA4Q9Y5G9 962 aa9.61□□□□□ -0.87
MMP16-204ENST00000544227 TRIM26Q12899 539 aaPredicted RBP9.6□□□□□ -0.87
MMP16-204ENST00000544227 AXIN2Q9Y2T1 843 aa9.6□□□□□ -0.87
MMP16-204ENST00000544227 CEP164Q9UPV0 1460 aa9.58□□□□□ -0.88
MMP16-204ENST00000544227 SUPT5HO00267 1087 aaKnown RBP9.57□□□□□ -0.88
MMP16-204ENST00000544227 SLC34A2O95436 690 aa9.57□□□□□ -0.88
MMP16-204ENST00000544227 FANCD2Q9BXW9 1451 aa9.57□□□□□ -0.88
MMP16-204ENST00000544227 RGL2O15211 777 aa9.56□□□□□ -0.88
MMP16-204ENST00000544227 CFTRP13569 1480 aa9.54□□□□□ -0.88
MMP16-204ENST00000544227 PSDA5PKW4 1024 aaPredicted RBP9.53□□□□□ -0.88
MMP16-204ENST00000544227 RSF1Q96T23 1441 aaPredicted RBP9.53□□□□□ -0.88
MMP16-204ENST00000544227 POTEEQ6S8J3 1075 aa9.52□□□□□ -0.88
MMP16-204ENST00000544227 URB2Q14146 1524 aaKnown RBP9.52□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms