RNA–Protein interactions for RNA: ENST00000543988.1

OTUB1-212, Transcript of OTU deubiquitinase, ubiquitin aldehyde binding 1, humanhuman

TSL 1 (best) BASIC

Gene OTUB1, Length 1,259 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
OTUB1-212ENST00000543988 PREX2Q70Z35 1606 aa34.53■■■■□ 3.12
OTUB1-212ENST00000543988 SCAPERQ9BY12 1400 aa34.48■■■■□ 3.11
OTUB1-212ENST00000543988 GPATCH8Q9UKJ3 1502 aaKnown RBP34.47■■■■□ 3.11
OTUB1-212ENST00000543988 CDC42BPBQ9Y5S2 1711 aa34.47■■■■□ 3.11
OTUB1-212ENST00000543988 CDC42BPAQ5VT25 1732 aa34.45■■■■□ 3.11
OTUB1-212ENST00000543988 POGZQ7Z3K3 1410 aa34.45■■■■□ 3.11
OTUB1-212ENST00000543988 RICTORQ6R327 1708 aa34.44■■■■□ 3.1
OTUB1-212ENST00000543988 MAP3K1Q13233 1512 aa34.44■■■■□ 3.1
OTUB1-212ENST00000543988 CCNB3Q8WWL7 1395 aa34.43■■■■□ 3.1
OTUB1-212ENST00000543988 LRRC9Q6ZRR7 1453 aa34.41■■■■□ 3.1
OTUB1-212ENST00000543988 ZMYM4Q5VZL5 1548 aa34.39■■■■□ 3.1
OTUB1-212ENST00000543988 NCOA2Q15596 1464 aa34.38■■■■□ 3.09
OTUB1-212ENST00000543988 ABCC1P33527 1531 aa34.37■■■■□ 3.09
OTUB1-212ENST00000543988 KANK4Q5T7N3 995 aaPredicted RBP34.35■■■■□ 3.09
OTUB1-212ENST00000543988 SUPT6HQ7KZ85 1726 aaKnown RBP34.33■■■■□ 3.09
OTUB1-212ENST00000543988 ARHGEF40Q8TER5 1519 aa34.33■■■■□ 3.09
OTUB1-212ENST00000543988 ARHGEF12Q9NZN5 1544 aa34.33■■■■□ 3.09
OTUB1-212ENST00000543988 CFDP1Q9UEE9 299 aaPredicted RBP34.32■■■■□ 3.08
OTUB1-212ENST00000543988 SAMD9LQ8IVG5 1584 aa34.32■■■■□ 3.08
OTUB1-212ENST00000543988 ZNF777Q9ULD5 760 aaPredicted RBP34.31■■■■□ 3.08
OTUB1-212ENST00000543988 ZNF518AQ6AHZ1 1483 aa34.31■■■■□ 3.08
OTUB1-212ENST00000543988 YEATS2Q9ULM3 1422 aa34.28■■■■□ 3.08
OTUB1-212ENST00000543988 MAGI2Q86UL8 1455 aa34.27■■■■□ 3.08
OTUB1-212ENST00000543988 ZFYVE16Q7Z3T8 1539 aa34.27■■■■□ 3.08
OTUB1-212ENST00000543988 KDM4FA0A1W2PPD8 638 aa34.27■■■■□ 3.08
OTUB1-212ENST00000543988 TRAPPC8Q9Y2L5 1435 aa34.27■■■■□ 3.08
OTUB1-212ENST00000543988 KDM5CP41229 1560 aa34.27■■■■□ 3.08
OTUB1-212ENST00000543988 ITSN2Q9NZM3 1697 aa34.26■■■■□ 3.08
OTUB1-212ENST00000543988 APLP2Q06481 763 aa34.26■■■■□ 3.08
OTUB1-212ENST00000543988 AFAP1Q8N556 730 aa34.26■■■■□ 3.08
OTUB1-212ENST00000543988 SYCP2Q9BX26 1530 aa34.25■■■■□ 3.07
OTUB1-212ENST00000543988 PLEKHH2Q8IVE3 1493 aa34.21■■■■□ 3.07
OTUB1-212ENST00000543988 KIAA1107Q9UPP5 1409 aa34.2■■■■□ 3.06
OTUB1-212ENST00000543988 ZNF644Q9H582 1327 aaPredicted RBP34.19■■■■□ 3.06
OTUB1-212ENST00000543988 HECW2Q9P2P5 1572 aa34.16■■■■□ 3.06
OTUB1-212ENST00000543988 HNRNPMP52272 730 aaKnown RBP eCLIP34.16■■■■□ 3.06
OTUB1-212ENST00000543988 AEBP2Q6ZN18 517 aaPredicted RBP34.15■■■■□ 3.06
OTUB1-212ENST00000543988 MLH3Q9UHC1 1453 aa34.14■■■■□ 3.06
OTUB1-212ENST00000543988 CAMSAP2Q08AD1 1489 aa34.1■■■■□ 3.05
OTUB1-212ENST00000543988 ATP10AO60312 1499 aa34.09■■■■□ 3.05
OTUB1-212ENST00000543988 MYOM3Q5VTT5 1437 aa34.09■■■■□ 3.05
OTUB1-212ENST00000543988 MBD5Q9P267 1494 aa34.08■■■■□ 3.05
OTUB1-212ENST00000543988 ARID4BQ4LE39 1312 aaPredicted RBP34.07■■■■□ 3.05
OTUB1-212ENST00000543988 MYT1LQ9UL68 1186 aa34.07■■■■□ 3.04
OTUB1-212ENST00000543988 DIP2CQ9Y2E4 1556 aa34.06■■■■□ 3.04
OTUB1-212ENST00000543988 C9orf84Q5VXU9 1444 aa34.06■■■■□ 3.04
OTUB1-212ENST00000543988 ABCA6Q8N139 1617 aa34.05■■■■□ 3.04
OTUB1-212ENST00000543988 SIGLEC1Q9BZZ2 1709 aa34.05■■■■□ 3.04
OTUB1-212ENST00000543988 SPAG9O60271 1321 aaKnown RBP34.04■■■■□ 3.04
OTUB1-212ENST00000543988 KIDINS220Q9ULH0 1771 aa34.01■■■■□ 3.04
OTUB1-212ENST00000543988 MIA2Q96PC5 1412 aa34.01■■■■□ 3.03
OTUB1-212ENST00000543988 INO80Q9ULG1 1556 aaPredicted RBP33.98■■■■□ 3.03
OTUB1-212ENST00000543988 BCORL1Q5H9F3 1711 aa33.98■■■■□ 3.03
OTUB1-212ENST00000543988 ATP7AQ04656 1500 aa33.98■■■■□ 3.03
OTUB1-212ENST00000543988 CCDC141Q6ZP82 1450 aa33.97■■■■□ 3.03
OTUB1-212ENST00000543988 ADAMTSL3P82987 1691 aa33.96■■■■□ 3.03
OTUB1-212ENST00000543988 REREQ9P2R6 1566 aa33.95■■■■□ 3.03
OTUB1-212ENST00000543988 ARHGEF5Q12774 1597 aa33.92■■■■□ 3.02
OTUB1-212ENST00000543988 FGD6Q6ZV73 1430 aa33.9■■■■□ 3.02
OTUB1-212ENST00000543988 MADDQ8WXG6 1647 aa33.89■■■■□ 3.02
OTUB1-212ENST00000543988 MLECQ14165 292 aa33.87■■■■□ 3.01
OTUB1-212ENST00000543988 RSPH4AQ5TD94 716 aa33.86■■■■□ 3.01
OTUB1-212ENST00000543988 RTEL1-TNFRSF6BF6WH68 1400 aa33.86■■■■□ 3.01
OTUB1-212ENST00000543988 AGLP35573 1532 aa33.84■■■■□ 3.01
OTUB1-212ENST00000543988 PTPN23Q9H3S7 1636 aa33.84■■■■□ 3.01
OTUB1-212ENST00000543988 PTPRMP28827 1452 aa33.81■■■■□ 3
OTUB1-212ENST00000543988 TCOF1Q13428 1488 aaKnown RBP33.81■■■■□ 3
OTUB1-212ENST00000543988 A2MP01023 1474 aa33.8■■■■□ 3
OTUB1-212ENST00000543988 PLXNC1O60486 1568 aa33.8■■■■□ 3
OTUB1-212ENST00000543988 PPARGC1BQ86YN6 1023 aaKnown RBP33.77■■■■□ 3
OTUB1-212ENST00000543988 RIMS1Q86UR5 1692 aaKnown RBP33.75■■■□□ 2.99
OTUB1-212ENST00000543988 TSPY4P0CV99 314 aa33.75■■■□□ 2.99
OTUB1-212ENST00000543988 TSPY10P0CW01 314 aa33.75■■■□□ 2.99
OTUB1-212ENST00000543988 MAST1Q9Y2H9 1570 aa33.73■■■□□ 2.99
OTUB1-212ENST00000543988 ADGBQ8N7X0 1667 aa33.73■■■□□ 2.99
OTUB1-212ENST00000543988 ABCC5O15440 1437 aa33.72■■■□□ 2.99
OTUB1-212ENST00000543988 FER1L4A9Z1Z3 1794 aa33.7■■■□□ 2.99
OTUB1-212ENST00000543988 DHX29Q7Z478 1369 aaKnown RBP33.68■■■□□ 2.98
OTUB1-212ENST00000543988 DAPK1P53355 1430 aa33.68■■■□□ 2.98
OTUB1-212ENST00000543988 SHANK2Q9UPX8 1470 aa33.68■■■□□ 2.98
OTUB1-212ENST00000543988 DNMT1P26358 1616 aaKnown RBP33.67■■■□□ 2.98
OTUB1-212ENST00000543988 CROCC2H7BZ55 1655 aa33.64■■■□□ 2.98
OTUB1-212ENST00000543988 FAM50AQ14320 339 aaKnown RBP33.63■■■□□ 2.97
OTUB1-212ENST00000543988 PLPPR3Q6T4P5 718 aa33.58■■■□□ 2.97
OTUB1-212ENST00000543988 GGT6Q6P531 493 aa33.54■■■□□ 2.96
OTUB1-212ENST00000543988 CNTLNQ9NXG0 1405 aa33.53■■■□□ 2.96
OTUB1-212ENST00000543988 KIF15Q9NS87 1388 aa33.53■■■□□ 2.96
OTUB1-212ENST00000543988 KIF3BO15066 747 aa33.53■■■□□ 2.96
OTUB1-212ENST00000543988 ESF1Q9H501 851 aaKnown RBP33.53■■■□□ 2.96
OTUB1-212ENST00000543988 CEBPAP49715 358 aaPredicted RBP33.5■■■□□ 2.95
OTUB1-212ENST00000543988 CHIC2Q9UKJ5 165 aa33.5■■■□□ 2.95
OTUB1-212ENST00000543988 DUOX2Q9NRD8 1548 aa33.49■■■□□ 2.95
OTUB1-212ENST00000543988 RRP7BPQ9NSQ0 103 aa33.48■■■□□ 2.95
OTUB1-212ENST00000543988 ANKRD30AQ9BXX3 1397 aa33.47■■■□□ 2.95
OTUB1-212ENST00000543988 ADGRL2O95490 1459 aa33.45■■■□□ 2.95
OTUB1-212ENST00000543988 PTPRKQ15262 1439 aa33.44■■■□□ 2.94
OTUB1-212ENST00000543988 NCOA1Q15788 1441 aa33.44■■■□□ 2.94
OTUB1-212ENST00000543988 EIF2AK4Q9P2K8 1649 aaKnown RBP33.43■■■□□ 2.94
OTUB1-212ENST00000543988 PPP6R1Q9UPN7 881 aa33.43■■■□□ 2.94
OTUB1-212ENST00000543988 C3P01024 1663 aa33.42■■■□□ 2.94
Retrieved 100 of 20,778 RNA–protein pairs in 134.2 ms