RNA–Protein interactions for RNA: ENST00000543727.5

TSFM-208, Transcript of Ts translation elongation factor, mitochondrial, humanhuman

TSL 1 (best) BASIC

Gene TSFM, Length 651 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSFM-208ENST00000543727 ITSN2Q9NZM3 1697 aa28.26■■■□□ 2.11
TSFM-208ENST00000543727 RICTORQ6R327 1708 aa28.24■■■□□ 2.11
TSFM-208ENST00000543727 EFCAB2Q5VUJ9 269 aa28.22■■■□□ 2.11
TSFM-208ENST00000543727 LRRC9Q6ZRR7 1453 aa28.21■■■□□ 2.11
TSFM-208ENST00000543727 FRMPD1Q5SYB0 1578 aa28.2■■■□□ 2.11
TSFM-208ENST00000543727 ADGRL1O94910 1474 aa28.2■■■□□ 2.1
TSFM-208ENST00000543727 DENND4BO75064 1496 aaPredicted RBP28.19■■■□□ 2.1
TSFM-208ENST00000543727 GPATCH8Q9UKJ3 1502 aaKnown RBP28.17■■■□□ 2.1
TSFM-208ENST00000543727 ZMYM4Q5VZL5 1548 aa28.15■■■□□ 2.1
TSFM-208ENST00000543727 APLP2Q06481 763 aa28.15■■■□□ 2.1
TSFM-208ENST00000543727 CCNB3Q8WWL7 1395 aa28.14■■■□□ 2.1
TSFM-208ENST00000543727 ABCC1P33527 1531 aa28.13■■■□□ 2.09
TSFM-208ENST00000543727 NCOA2Q15596 1464 aa28.13■■■□□ 2.09
TSFM-208ENST00000543727 POGZQ7Z3K3 1410 aa28.11■■■□□ 2.09
TSFM-208ENST00000543727 SCAPERQ9BY12 1400 aa28.09■■■□□ 2.09
TSFM-208ENST00000543727 ZNF518AQ6AHZ1 1483 aa28.08■■■□□ 2.09
TSFM-208ENST00000543727 PLEKHH2Q8IVE3 1493 aa28.08■■■□□ 2.09
TSFM-208ENST00000543727 SAMD9LQ8IVG5 1584 aa28.08■■■□□ 2.09
TSFM-208ENST00000543727 MAGI2Q86UL8 1455 aa28.08■■■□□ 2.09
TSFM-208ENST00000543727 KDM5CP41229 1560 aa28.06■■■□□ 2.08
TSFM-208ENST00000543727 RAPGEF3O95398 923 aa28.05■■■□□ 2.08
TSFM-208ENST00000543727 ARHGEF40Q8TER5 1519 aa28.05■■■□□ 2.08
TSFM-208ENST00000543727 CFDP1Q9UEE9 299 aaPredicted RBP28.03■■■□□ 2.08
TSFM-208ENST00000543727 KIAA1107Q9UPP5 1409 aa28.02■■■□□ 2.08
TSFM-208ENST00000543727 HECW2Q9P2P5 1572 aa27.99■■■□□ 2.07
TSFM-208ENST00000543727 KANK4Q5T7N3 995 aaPredicted RBP27.99■■■□□ 2.07
TSFM-208ENST00000543727 ZFYVE16Q7Z3T8 1539 aa27.98■■■□□ 2.07
TSFM-208ENST00000543727 SYCP2Q9BX26 1530 aa27.98■■■□□ 2.07
TSFM-208ENST00000543727 ARHGEF12Q9NZN5 1544 aa27.96■■■□□ 2.07
TSFM-208ENST00000543727 MYOM3Q5VTT5 1437 aa27.93■■■□□ 2.06
TSFM-208ENST00000543727 MIA2Q96PC5 1412 aa27.93■■■□□ 2.06
TSFM-208ENST00000543727 MLH3Q9UHC1 1453 aa27.93■■■□□ 2.06
TSFM-208ENST00000543727 ZNF777Q9ULD5 760 aaPredicted RBP27.91■■■□□ 2.06
TSFM-208ENST00000543727 TRAPPC8Q9Y2L5 1435 aa27.91■■■□□ 2.06
TSFM-208ENST00000543727 CAMSAP2Q08AD1 1489 aa27.9■■■□□ 2.06
TSFM-208ENST00000543727 ARHGEF5Q12774 1597 aa27.87■■■□□ 2.05
TSFM-208ENST00000543727 KIDINS220Q9ULH0 1771 aa27.87■■■□□ 2.05
TSFM-208ENST00000543727 REREQ9P2R6 1566 aa27.86■■■□□ 2.05
TSFM-208ENST00000543727 INO80Q9ULG1 1556 aaPredicted RBP27.86■■■□□ 2.05
TSFM-208ENST00000543727 MBD5Q9P267 1494 aa27.85■■■□□ 2.05
TSFM-208ENST00000543727 AFAP1Q8N556 730 aa27.85■■■□□ 2.05
TSFM-208ENST00000543727 YEATS2Q9ULM3 1422 aa27.84■■■□□ 2.05
TSFM-208ENST00000543727 ATP10AO60312 1499 aa27.83■■■□□ 2.05
TSFM-208ENST00000543727 DIP2CQ9Y2E4 1556 aa27.83■■■□□ 2.05
TSFM-208ENST00000543727 ABCA6Q8N139 1617 aa27.83■■■□□ 2.05
TSFM-208ENST00000543727 RSPH4AQ5TD94 716 aa27.83■■■□□ 2.05
TSFM-208ENST00000543727 C9orf84Q5VXU9 1444 aa27.82■■■□□ 2.04
TSFM-208ENST00000543727 CCDC141Q6ZP82 1450 aa27.81■■■□□ 2.04
TSFM-208ENST00000543727 ATP7AQ04656 1500 aa27.81■■■□□ 2.04
TSFM-208ENST00000543727 PTPN23Q9H3S7 1636 aa27.8■■■□□ 2.04
TSFM-208ENST00000543727 HNRNPMP52272 730 aaKnown RBP eCLIP27.79■■■□□ 2.04
TSFM-208ENST00000543727 BCORL1Q5H9F3 1711 aa27.78■■■□□ 2.04
TSFM-208ENST00000543727 ZNF644Q9H582 1327 aaPredicted RBP27.78■■■□□ 2.04
TSFM-208ENST00000543727 FGD6Q6ZV73 1430 aa27.77■■■□□ 2.04
TSFM-208ENST00000543727 ADGBQ8N7X0 1667 aa27.77■■■□□ 2.04
TSFM-208ENST00000543727 RTEL1-TNFRSF6BF6WH68 1400 aa27.76■■■□□ 2.04
TSFM-208ENST00000543727 SPAG9O60271 1321 aaKnown RBP27.76■■■□□ 2.03
TSFM-208ENST00000543727 TCOF1Q13428 1488 aaKnown RBP27.75■■■□□ 2.03
TSFM-208ENST00000543727 SIGLEC1Q9BZZ2 1709 aa27.75■■■□□ 2.03
TSFM-208ENST00000543727 ADAMTSL3P82987 1691 aa27.74■■■□□ 2.03
TSFM-208ENST00000543727 MYT1LQ9UL68 1186 aa27.73■■■□□ 2.03
TSFM-208ENST00000543727 MAST1Q9Y2H9 1570 aa27.73■■■□□ 2.03
TSFM-208ENST00000543727 CROCC2H7BZ55 1655 aa27.72■■■□□ 2.03
TSFM-208ENST00000543727 AGLP35573 1532 aa27.72■■■□□ 2.03
TSFM-208ENST00000543727 KDM4FA0A1W2PPD8 638 aa27.69■■■□□ 2.02
TSFM-208ENST00000543727 PLXNC1O60486 1568 aa27.68■■■□□ 2.02
TSFM-208ENST00000543727 DNMT1P26358 1616 aaKnown RBP27.67■■■□□ 2.02
TSFM-208ENST00000543727 ARID4BQ4LE39 1312 aaPredicted RBP27.66■■■□□ 2.02
TSFM-208ENST00000543727 SHANK2Q9UPX8 1470 aa27.65■■■□□ 2.02
TSFM-208ENST00000543727 TSPY4P0CV99 314 aa27.63■■■□□ 2.01
TSFM-208ENST00000543727 TSPY10P0CW01 314 aa27.63■■■□□ 2.01
TSFM-208ENST00000543727 FER1L4A9Z1Z3 1794 aa27.63■■■□□ 2.01
TSFM-208ENST00000543727 A2MP01023 1474 aa27.62■■■□□ 2.01
TSFM-208ENST00000543727 MADDQ8WXG6 1647 aa27.61■■■□□ 2.01
TSFM-208ENST00000543727 AEBP2Q6ZN18 517 aaPredicted RBP27.59■■■□□ 2.01
TSFM-208ENST00000543727 DAPK1P53355 1430 aa27.58■■■□□ 2
TSFM-208ENST00000543727 ABCC5O15440 1437 aa27.56■■■□□ 2
TSFM-208ENST00000543727 RIMS1Q86UR5 1692 aaKnown RBP27.55■■■□□ 2
TSFM-208ENST00000543727 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP27.54■■■□□ 2
TSFM-208ENST00000543727 EIF2AK4Q9P2K8 1649 aaKnown RBP27.52■■■□□ 2
TSFM-208ENST00000543727 DHX29Q7Z478 1369 aaKnown RBP27.51■■□□□ 1.99
TSFM-208ENST00000543727 PTPRMP28827 1452 aa27.5■■□□□ 1.99
TSFM-208ENST00000543727 DUOX2Q9NRD8 1548 aa27.48■■□□□ 1.99
TSFM-208ENST00000543727 FAM135AQ9P2D6 1515 aa27.48■■□□□ 1.99
TSFM-208ENST00000543727 MROH2AA6NES4 1674 aa27.46■■□□□ 1.99
TSFM-208ENST00000543727 RRBP1Q9P2E9 1410 aaKnown RBP27.46■■□□□ 1.99
TSFM-208ENST00000543727 ADGRL2O95490 1459 aa27.45■■□□□ 1.99
TSFM-208ENST00000543727 FAM50AQ14320 339 aaKnown RBP27.45■■□□□ 1.98
TSFM-208ENST00000543727 CNTLNQ9NXG0 1405 aa27.44■■□□□ 1.98
TSFM-208ENST00000543727 RNF17Q9BXT8 1623 aaKnown RBP27.43■■□□□ 1.98
TSFM-208ENST00000543727 MLECQ14165 292 aa27.42■■□□□ 1.98
TSFM-208ENST00000543727 PPARGC1BQ86YN6 1023 aaKnown RBP27.42■■□□□ 1.98
TSFM-208ENST00000543727 ANKRD30AQ9BXX3 1397 aa27.42■■□□□ 1.98
TSFM-208ENST00000543727 PPP6R1Q9UPN7 881 aa27.41■■□□□ 1.98
TSFM-208ENST00000543727 ERBINQ96RT1 1412 aa27.41■■□□□ 1.98
TSFM-208ENST00000543727 KIF15Q9NS87 1388 aa27.4■■□□□ 1.98
TSFM-208ENST00000543727 NCOA1Q15788 1441 aa27.37■■□□□ 1.97
TSFM-208ENST00000543727 C3P01024 1663 aa27.36■■□□□ 1.97
TSFM-208ENST00000543727 ESF1Q9H501 851 aaKnown RBP27.36■■□□□ 1.97
TSFM-208ENST00000543727 CLTCQ00610 1675 aaKnown RBP27.36■■□□□ 1.97
Retrieved 100 of 20,778 RNA–protein pairs in 9.4 ms