RNA–Protein interactions for RNA: ENST00000543660.1

NPIPB4-219, Transcript of nuclear pore complex interacting protein family member B4, humanhuman

TSL 5

Gene NPIPB4, Length 353 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPB4-219ENST00000543660 TEX14Q8IWB6 1497 aa8.76□□□□□ -1.01
NPIPB4-219ENST00000543660 MAP3K4Q9Y6R4 1608 aa8.76□□□□□ -1.01
NPIPB4-219ENST00000543660 UACAQ9BZF9 1416 aa8.74□□□□□ -1.01
NPIPB4-219ENST00000543660 AMER1Q5JTC6 1135 aaPredicted RBP8.74□□□□□ -1.01
NPIPB4-219ENST00000543660 CARMIL2Q6F5E8 1435 aa8.73□□□□□ -1.01
NPIPB4-219ENST00000543660 CUL7Q14999 1698 aa8.73□□□□□ -1.01
NPIPB4-219ENST00000543660 CLCN6P51797 869 aa8.73□□□□□ -1.01
NPIPB4-219ENST00000543660 KDM5BQ9UGL1 1544 aa8.73□□□□□ -1.01
NPIPB4-219ENST00000543660 CSRNP3Q8WYN3 585 aa8.72□□□□□ -1.01
NPIPB4-219ENST00000543660 DISP1Q96F81 1524 aa8.69□□□□□ -1.02
NPIPB4-219ENST00000543660 DISP3Q9P2K9 1392 aa8.68□□□□□ -1.02
NPIPB4-219ENST00000543660 PTPRMP28827 1452 aa8.68□□□□□ -1.02
NPIPB4-219ENST00000543660 MAGI3Q5TCQ9 1506 aa8.68□□□□□ -1.02
NPIPB4-219ENST00000543660 ZCCHC11Q5TAX3 1644 aaKnown RBP8.68□□□□□ -1.02
NPIPB4-219ENST00000543660 CD44P16070 742 aaKnown RBP8.67□□□□□ -1.02
NPIPB4-219ENST00000543660 CARMIL1Q5VZK9 1371 aa8.67□□□□□ -1.02
NPIPB4-219ENST00000543660 CD109Q6YHK3 1445 aa8.67□□□□□ -1.02
NPIPB4-219ENST00000543660 KIF27Q86VH2 1401 aa8.67□□□□□ -1.02
NPIPB4-219ENST00000543660 WDR7Q9Y4E6 1490 aa8.67□□□□□ -1.02
NPIPB4-219ENST00000543660 KIF21BO75037 1637 aa8.66□□□□□ -1.02
NPIPB4-219ENST00000543660 IQGAP2Q13576 1575 aa8.66□□□□□ -1.02
NPIPB4-219ENST00000543660 SUPT5HO00267 1087 aaKnown RBP8.66□□□□□ -1.02
NPIPB4-219ENST00000543660 FARP1Q9Y4F1 1045 aaPredicted RBP8.66□□□□□ -1.02
NPIPB4-219ENST00000543660 ADAMTSL3P82987 1691 aa8.64□□□□□ -1.03
NPIPB4-219ENST00000543660 PCF11O94913 1555 aaKnown RBP8.64□□□□□ -1.03
NPIPB4-219ENST00000543660 KCNH8Q96L42 1107 aa8.63□□□□□ -1.03
NPIPB4-219ENST00000543660 SPATA31D1Q6ZQQ2 1576 aa8.63□□□□□ -1.03
NPIPB4-219ENST00000543660 POTEIP0CG38 1075 aa8.62□□□□□ -1.03
NPIPB4-219ENST00000543660 CERKQ8TCT0 537 aa8.62□□□□□ -1.03
NPIPB4-219ENST00000543660 ARAP3Q8WWN8 1544 aa8.62□□□□□ -1.03
NPIPB4-219ENST00000543660 CFAP43Q8NDM7 1665 aa8.62□□□□□ -1.03
NPIPB4-219ENST00000543660 UGGT2Q9NYU1 1516 aa8.61□□□□□ -1.03
NPIPB4-219ENST00000543660 HSPA2P54652 639 aa8.6□□□□□ -1.03
NPIPB4-219ENST00000543660 KIAA0556O60303 1618 aa8.59□□□□□ -1.03
NPIPB4-219ENST00000543660 RAPGEF3O95398 923 aa8.58□□□□□ -1.04
NPIPB4-219ENST00000543660 RTN4Q9NQC3 1192 aaKnown RBP8.58□□□□□ -1.04
NPIPB4-219ENST00000543660 DCBLD2Q96PD2 775 aa8.57□□□□□ -1.04
NPIPB4-219ENST00000543660 MADDQ8WXG6 1647 aa8.57□□□□□ -1.04
NPIPB4-219ENST00000543660 BCORL1Q5H9F3 1711 aa8.57□□□□□ -1.04
NPIPB4-219ENST00000543660 PHLDB1Q86UU1 1377 aa8.56□□□□□ -1.04
NPIPB4-219ENST00000543660 ARID4BQ4LE39 1312 aaPredicted RBP8.55□□□□□ -1.04
NPIPB4-219ENST00000543660 ZNF579Q8NAF0 562 aaKnown RBP8.55□□□□□ -1.04
NPIPB4-219ENST00000543660 ABCA8O94911 1581 aa8.55□□□□□ -1.04
NPIPB4-219ENST00000543660 RAPGEF2Q9Y4G8 1499 aa8.53□□□□□ -1.04
NPIPB4-219ENST00000543660 FRMPD1Q5SYB0 1578 aa8.52□□□□□ -1.05
NPIPB4-219ENST00000543660 RIMS1Q86UR5 1692 aaKnown RBP8.51□□□□□ -1.05
NPIPB4-219ENST00000543660 STAG3Q9UJ98 1225 aa8.51□□□□□ -1.05
NPIPB4-219ENST00000543660 NEO1Q92859 1461 aa8.51□□□□□ -1.05
NPIPB4-219ENST00000543660 ABCA9Q8IUA7 1624 aa8.51□□□□□ -1.05
NPIPB4-219ENST00000543660 ATP10BO94823 1461 aa8.5□□□□□ -1.05
NPIPB4-219ENST00000543660 GOLGA3Q08378 1498 aa8.5□□□□□ -1.05
NPIPB4-219ENST00000543660 ARID3CA6NKF2 412 aa8.49□□□□□ -1.05
NPIPB4-219ENST00000543660 ZRANB1Q9UGI0 708 aa8.49□□□□□ -1.05
NPIPB4-219ENST00000543660 ARHGEF40Q8TER5 1519 aa8.47□□□□□ -1.05
NPIPB4-219ENST00000543660 YEATS2Q9ULM3 1422 aa8.46□□□□□ -1.05
NPIPB4-219ENST00000543660 CREBZFQ9NS37 354 aa8.46□□□□□ -1.06
NPIPB4-219ENST00000543660 FHOD3Q2V2M9 1422 aa8.46□□□□□ -1.06
NPIPB4-219ENST00000543660 POGZQ7Z3K3 1410 aa8.46□□□□□ -1.06
NPIPB4-219ENST00000543660 SIGLEC1Q9BZZ2 1709 aa8.45□□□□□ -1.06
NPIPB4-219ENST00000543660 DENND4BO75064 1496 aaPredicted RBP8.45□□□□□ -1.06
NPIPB4-219ENST00000543660 AKNAQ7Z591 1439 aa8.44□□□□□ -1.06
NPIPB4-219ENST00000543660 FANCAO15360 1455 aa8.44□□□□□ -1.06
NPIPB4-219ENST00000543660 RICTORQ6R327 1708 aa8.43□□□□□ -1.06
NPIPB4-219ENST00000543660 STRCQ7RTU9 1775 aa8.43□□□□□ -1.06
NPIPB4-219ENST00000543660 MLECQ14165 292 aa8.43□□□□□ -1.06
NPIPB4-219ENST00000543660 TTC37Q6PGP7 1564 aa8.43□□□□□ -1.06
NPIPB4-219ENST00000543660 CTTNBP2Q8WZ74 1663 aa8.43□□□□□ -1.06
NPIPB4-219ENST00000543660 PAK3O75914 559 aaPredicted RBP8.42□□□□□ -1.06
NPIPB4-219ENST00000543660 CEBPAP49715 358 aaPredicted RBP8.42□□□□□ -1.06
NPIPB4-219ENST00000543660 P3H3Q8IVL6 736 aa8.42□□□□□ -1.06
NPIPB4-219ENST00000543660 PLSCR2Q9NRY7 297 aa8.42□□□□□ -1.06
NPIPB4-219ENST00000543660 ZMYM4Q5VZL5 1548 aa8.41□□□□□ -1.06
NPIPB4-219ENST00000543660 GALR2O43603 387 aaPredicted RBP8.41□□□□□ -1.06
NPIPB4-219ENST00000543660 ZFYVE16Q7Z3T8 1539 aa8.4□□□□□ -1.06
NPIPB4-219ENST00000543660 MAGI2Q86UL8 1455 aa8.4□□□□□ -1.06
NPIPB4-219ENST00000543660 PTPRTO14522 1441 aa8.4□□□□□ -1.06
NPIPB4-219ENST00000543660 FAM9AQ8IZU1 332 aaPredicted RBP8.4□□□□□ -1.06
NPIPB4-219ENST00000543660 FER1L4A9Z1Z3 1794 aa8.4□□□□□ -1.07
NPIPB4-219ENST00000543660 PREX1Q8TCU6 1659 aa8.4□□□□□ -1.07
NPIPB4-219ENST00000543660 LTBP4Q8N2S1 1624 aa8.4□□□□□ -1.07
NPIPB4-219ENST00000543660 ARHGEF12Q9NZN5 1544 aa8.39□□□□□ -1.07
NPIPB4-219ENST00000543660 EFCAB5A4FU69 1503 aa8.39□□□□□ -1.07
NPIPB4-219ENST00000543660 IQSEC2Q5JU85 1478 aa8.38□□□□□ -1.07
NPIPB4-219ENST00000543660 OTUD5Q96G74 571 aa8.38□□□□□ -1.07
NPIPB4-219ENST00000543660 PRXQ9BXM0 1461 aa8.38□□□□□ -1.07
NPIPB4-219ENST00000543660 UHRF1BP1Q6BDS2 1440 aa8.37□□□□□ -1.07
NPIPB4-219ENST00000543660 NUP153P49790 1475 aaKnown RBP8.37□□□□□ -1.07
NPIPB4-219ENST00000543660 SETD1BQ9UPS6 1966 aaKnown RBP8.37□□□□□ -1.07
NPIPB4-219ENST00000543660 HECW1Q76N89 1606 aa8.36□□□□□ -1.07
NPIPB4-219ENST00000543660 RAPGEF6Q8TEU7 1601 aa8.36□□□□□ -1.07
NPIPB4-219ENST00000543660 PLEKHD1A6NEE1 506 aa8.36□□□□□ -1.07
NPIPB4-219ENST00000543660 ATP10AO60312 1499 aa8.36□□□□□ -1.07
NPIPB4-219ENST00000543660 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP8.35□□□□□ -1.07
NPIPB4-219ENST00000543660 CFAP74Q9C0B2 1584 aa8.35□□□□□ -1.07
NPIPB4-219ENST00000543660 SPDYE4A6NLX3 237 aa8.34□□□□□ -1.07
NPIPB4-219ENST00000543660 C9orf84Q5VXU9 1444 aa8.34□□□□□ -1.07
NPIPB4-219ENST00000543660 SCAPERQ9BY12 1400 aa8.34□□□□□ -1.07
NPIPB4-219ENST00000543660 POTEB2H3BUK9 544 aa8.33□□□□□ -1.08
NPIPB4-219ENST00000543660 SAMD9Q5K651 1589 aa8.33□□□□□ -1.08
NPIPB4-219ENST00000543660 NCOA1Q15788 1441 aa8.32□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 11 ms